Dequ013300.1
Basic Information
- Insect
- Drosophila equinoxialis
- Gene Symbol
- fru
- Assembly
- GCA_018150345.1
- Location
- JAECWI010000600.1:9828662-9830849[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.2e-12 1e-08 34.8 0.1 1 44 363 406 363 407 0.91 2 2 2 4.8e+03 -2.5 0.9 4 20 502 517 502 517 0.86
Sequence Information
- Coding Sequence
- ATGGGTGGTGGCGGAGGCGGTGGTGCCACTCCCGTAGCAGCCAGCAGTGAGGGTGGCCAAACCTATTGCCTTCGCTGGAATAATCATCAAACGAATTTGGTACAAATCCTTCATGCCCTGCACGAGGTGGGCAGCTATGTGGACTGCACTTTGGTTGTGGATGATGAACAATTCAAGGCCCACCGTGTCGTATTGGCCGCCAATTCGCCATATTTTCAACATATATTACAAGATGTTCCACAAGATCATTGTAGCATTATATTGCCAGGTGTCAAGGGTTTCGAGATTGCTGCCCTTTTGCAATATATGTATACGGGTGAGACGACAGTTACCAAGAGTCAGGAGCCCGAAATTTTACGTACAGCCAAGGAGCTGCAGGTGAAGGGTCTCTATGATAATTTGATGAAATTCAATAATAATAAGCCAACAAGTGCAGCAACATCGCCAGATGAGCGTGTCCATTATGGTCATGGCAATAGCATAGCTCCAACTTCTAGTTCCGGTTCGAGTGCATTTGGTGCCTACCAGCAGCCACCGTATTCGAATTATGGTCCATCAGGAGCAAGTCATCCCTCACATATTCCAGCCGGCGAGACTCCATTGACTCCCACCCATGCCACTCCACATGCTGCAGCCGGTGAGGCTGGCCAATGGCCACTATCTCCATCAGCTGCCGCTGCTGCCATGTTGAATTCCGTATATGAGTCTGCTGCCGATATGAATCCTCTTAAGCGTAAAAAACTCTCGGCCATATCTAGTATGTTGCTCAATAGTACACGAGATACACCCATTTTGCGTAATGTTTTGGCCCAGGCTAATCCAGCGGACTCGTCACAACAGCAACCGAATCCTTTGCTCCTGAAGAGTTCCTCATCATCCTCATTGGCAGAGAAGTCGACACCCCATCAGAGTAGTGGCGGTGGCGGAAACCTTGGCGGCGGTGGAGGTACCGGTAGCCACAGTTTCAACGGCTCCGACTATGGCGGTGATAAGGAACCCCTCTCTCCACACACAGATCGCTCATTCGACGAGGAGACGGGAGGTCCTGGTGGCAAGAAACCGGAATGGAAACGCTACAAGCAATATACCCGGGCCGACATGATGTGCGCCATTCAAGCTGTACGCGAGGGCATGAGCGCTTTGCAGGCGAGTCGTAAATATGGACTGCCCAGTCGAACACTCTATGATAAGGTGCGCAAGCTAAATATCACCACAGGCCGAGGAACACATCGCACTCCCAAGCGTAGTCCACCTGGAGTGGAATCTTCGGCTGCCTTCCCCTATTCCGCTGCGGCAGCAGCTGCTGCGGCCCACAATTATGGTCAGTCTGAGCTCCTGGAACGCAGTGAGCAGGTCAAGGATCATGGTTCACACCATCCTCATCATGGCATGCCACCAACTATATCCCATTCGGCAGCTGCCCTCCTGGATCATGCGTTCCTCCAGCAGGCCCTGGAGAACCGTGGCGGTGACATGGCCGGACGTGAAGCTCTTCATGCCATGGCATTGGCTGCAGCTGCTCATGCAGCAGCCAATCGTATGTCCACCAGTCCCCCAGGTTCGGGTTCAAATGGTCATCCACATGGATCCGCAAGATCACGTAGTCCCAGCCCCAGTCCACAGCATTATCCCGAGGATCTGGAAATGCATGAGACCAAACATCACGAGCGTCTAATCAAACGTGAACGGGAGCAGGATGAGCGTGAAGATGTTGATGCTGACGATGAAGAGGATCAGGATCATGATCATGTTGAAGATCTATCATTGGCACGTAAAGAGCGACCCGAATCACCATATTCCCCACCGCCACCAAGGGCATCATCGCCCCTGGAGGGAGCCAGTAGCACGAGGATTATCCCAATTCGGCACAATCATCGCCACCTCCGCCCCCCACCGCCATTGCCTCTCGGTTTGGGCCTTAAACGTGAGCTCTTGGGCAACGATGAAATGCAAACCCGCACAGACTGA
- Protein Sequence
- MGGGGGGGATPVAASSEGGQTYCLRWNNHQTNLVQILHALHEVGSYVDCTLVVDDEQFKAHRVVLAANSPYFQHILQDVPQDHCSIILPGVKGFEIAALLQYMYTGETTVTKSQEPEILRTAKELQVKGLYDNLMKFNNNKPTSAATSPDERVHYGHGNSIAPTSSSGSSAFGAYQQPPYSNYGPSGASHPSHIPAGETPLTPTHATPHAAAGEAGQWPLSPSAAAAAMLNSVYESAADMNPLKRKKLSAISSMLLNSTRDTPILRNVLAQANPADSSQQQPNPLLLKSSSSSSLAEKSTPHQSSGGGGNLGGGGGTGSHSFNGSDYGGDKEPLSPHTDRSFDEETGGPGGKKPEWKRYKQYTRADMMCAIQAVREGMSALQASRKYGLPSRTLYDKVRKLNITTGRGTHRTPKRSPPGVESSAAFPYSAAAAAAAAHNYGQSELLERSEQVKDHGSHHPHHGMPPTISHSAAALLDHAFLQQALENRGGDMAGREALHAMALAAAAHAAANRMSTSPPGSGSNGHPHGSARSRSPSPSPQHYPEDLEMHETKHHERLIKREREQDEREDVDADDEEDQDHDHVEDLSLARKERPESPYSPPPPRASSPLEGASSTRIIPIRHNHRHLRPPPPLPLGLGLKRELLGNDEMQTRTD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00501130;
- 90% Identity
- iTF_00523619;
- 80% Identity
- iTF_00503347;