Dequ008171.1
Basic Information
- Insect
- Drosophila equinoxialis
- Gene Symbol
- -
- Assembly
- GCA_018150345.1
- Location
- JAECWI010000001.1:10691220-10694835[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 4.6e-12 1.1e-08 34.7 0.0 1 40 195 235 195 238 0.90 2 4 1.7e-13 4.2e-10 39.3 0.1 2 39 250 287 249 290 0.94 3 4 1.1e-16 2.6e-13 49.5 0.0 1 45 304 349 304 349 0.98 4 4 6e-20 1.4e-16 60.0 0.0 1 43 356 399 356 400 0.97
Sequence Information
- Coding Sequence
- ATGACTAGTTTAGGCATGGGATTGAATGGCGGCCTATTGGGCGTACCCATGGGATTTCTGGACTTTACACCCGAACCACCAGCACCATCAGCCACACCAGTCACTGTAACGGAACATGTCGATATCTCCTGCAATCCAAGCACAGATACGCGAGATCTATCAAATCCCACCGAACCGCTTGACATTGACAATCATTTGGCGCAACAAATCCATCGGCTCGATCAATCTCCTATGCATTCAATAGCCCATCATCATACGGGCGATGAGAGTAATTCGAATTTGATAAAGCATGAACCGGGCATGATAATAACGCCAGAGATTGTCAATATGATGTCGTCCGGTCATATGGATATGTACAATTCAGATACCAGCGAGGATTCCATGATGATTGCCAACGGCTCACCGCACGATCAAAAGGAGCCGCACTATACGAATTTGGATCAGAAACACGGAATACTTGGCGGCAGCGGAATTTGCGGTCCGGGTGGTGCTGGTGGTGGTGGTGGTAGTGGTGGTAATGGTGGTGGTGTGGCTGGTGGTGTTGCTGGCGAGAAAGGTCAGTTTAATGGTCCCAAAGCTTGGACACAAGATGATATGAATTCAGCTTTAGATGCATTAAAGAATCAAAACATGAGCCTGACGAAAGCATCCGCCATATATGGTATACCATCGACCACCCTTTGGCAACGTGCTCATCGCCTGGGCATCGAAACGCCCAAGAAGGAGGGCGGCACAAAATCATGGAACGAGGATGCATTACAAAATGCCTTGGAGGCATTACGTGCGGGTCAAATATCCGCCAATAAGGCATCGAAAGCCTTTGGTATACCCTCATCGACACTGTACAAAATTGCCCGACGTGAGGGCATCAGATTGGCAGCACCATTCAATGCCGCACCAACAACATGGACGCCGGAGGATTTGGAACGGGCATTGGTGGCAATTCGAGCGGGTAATACATCGGTGCAAAAAGCAAGTGCCGAATTTGGCATACCAACAGGCACTCTTTATGGACGCTGCAAACGCGAAGGGATTGAATTGTCGCGTTCAAATCCTACACCCTGGTCTGAGGATGCCATGAACGAGGCCCTGAACTCAGTTCGTGTTGGCCAAATGTCAATCAACCAGGCGGCCATTCATTATAACCTGCCCTATAGTTCACTCTATGGGCGCTTTAAGCGTGGCAAATACGATGTTGTGGCCAATACCAGCGGAGTTTCGCTATTGAATACCTCAGGCAATACAACTGGAAGCATTGAGATTATTGAGCATAGTCAGGAGAATTCGTTGCATATGTTGCAGCAACAGTTTCCATACAGTCCGTCACCGCATCCACCAACGCCCCAGCATCATAGTACACCGCAACAGCATCACAGCAGCTCGCAGCAAGGACCACCAACGCCACAGCATATGCAGCAACAGCAGCAACAGCATGTGGTCCATATGCAGTCGCCACATCAGGGTCATATGGCAACGGGTCATATGCAACAGGATGTGGTTACCTCAAGAGGTGGTGGAGTAGGTGGAGGAGGAGGATCAGGAGGAGGAGCAGGTGGCCCTGGTGTATTAACGGGTATCAGCACTACACCCTTTGCTAGCATATCAGCATTGGTCAGCGGTGGATCAGCAGCACCATCACCTCATCATCCACCACCACCGTCAACATCAGCTTCAACTGGCACTAGCAAACGAAAGAAAGCAGCCAAACAAAAGCGTTGA
- Protein Sequence
- MTSLGMGLNGGLLGVPMGFLDFTPEPPAPSATPVTVTEHVDISCNPSTDTRDLSNPTEPLDIDNHLAQQIHRLDQSPMHSIAHHHTGDESNSNLIKHEPGMIITPEIVNMMSSGHMDMYNSDTSEDSMMIANGSPHDQKEPHYTNLDQKHGILGGSGICGPGGAGGGGGSGGNGGGVAGGVAGEKGQFNGPKAWTQDDMNSALDALKNQNMSLTKASAIYGIPSTTLWQRAHRLGIETPKKEGGTKSWNEDALQNALEALRAGQISANKASKAFGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLERALVAIRAGNTSVQKASAEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMNEALNSVRVGQMSINQAAIHYNLPYSSLYGRFKRGKYDVVANTSGVSLLNTSGNTTGSIEIIEHSQENSLHMLQQQFPYSPSPHPPTPQHHSTPQQHHSSSQQGPPTPQHMQQQQQQHVVHMQSPHQGHMATGHMQQDVVTSRGGGVGGGGGSGGGAGGPGVLTGISTTPFASISALVSGGSAAPSPHHPPPPSTSASTGTSKRKKAAKQKR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -