Basic Information

Gene Symbol
-
Assembly
GCA_018150345.1
Location
JAECWI010000600.1:3753291-3754201[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 4.3e-10 4.1e-07 30.4 0.0 28 89 146 198 119 198 0.81

Sequence Information

Coding Sequence
ATGTTTAAGTGCAAAAGTTATGAATTTGAAACAAATGTGAAACCAAATCTTCGGCGCCACTTGTTGACTCACACGAAGATACATGAAGGTCCCTATGGTTGCACCTTTTGCAGCTTTAAAACATTCAATAAACATTATGTAAAGGCACATGTCGCTCGCAAGCACGCTTCGGCAGGTGCTCCATTAAGGGAGCCCAACTCCCCCGTACTGGAGATTCCGCCGATGGCAGAAGGAATGATATTGGAGAACCCACAGACCATCGAGACGGAGCCTGAGGTACTGCAACACCCAGTGACCATCGAGACGGAGCCTGAGCCATTGCCAGCAGAGGAGTTAGAGCTCAAATGTGGACTTAAGTGGAGGAGCATGGCTGGCAAAAGGAAATACTTCTTCAAATCTTTAACGCCAGTCGAGGATGACACGGGTATCCTCCTAAATCCTGCCGTGGATTTATACAAGCTCTATATTACCGTGGTGGTCCAAGGGGGCTTTGACAAGCCACCTAATTGGGAAGACGTGGCCTATCTTTGCAATTTGATCGTGAACCCCTCCAAGCTGTCAGCAATATACGAAAAATTCCTGTTGAAGTACGAGGAGCAAGAAAAGACCCGACTGCGGTACCTGAAGCAGCGCAACATCCCGATCTGGTGGGACTACGGGGAGTATCATTGGAACACTCTTCTGCGTAAAAGACTCCTGGCTCTACGTCGTGAGGATGGACCCTCAGGAGTTGGTAGACTTTATGCTTTGCTTTAA
Protein Sequence
MFKCKSYEFETNVKPNLRRHLLTHTKIHEGPYGCTFCSFKTFNKHYVKAHVARKHASAGAPLREPNSPVLEIPPMAEGMILENPQTIETEPEVLQHPVTIETEPEPLPAEELELKCGLKWRSMAGKRKYFFKSLTPVEDDTGILLNPAVDLYKLYITVVVQGGFDKPPNWEDVAYLCNLIVNPSKLSAIYEKFLLKYEEQEKTRLRYLKQRNIPIWWDYGEYHWNTLLRKRLLALRREDGPSGVGRLYALL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00570908;
90% Identity
-
80% Identity
-