Deoh006825.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Drosophila eohydei
Gene Symbol
-
Assembly
GCA_035045825.1
Location
JAWNOT010000070.1:10541005-10543998[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 7 0.12 8 7.1 1.4 1 21 227 247 227 248 0.94
2 7 0.0017 0.11 13.0 2.3 1 23 254 277 254 277 0.96
3 7 0.00027 0.018 15.4 1.0 2 23 284 306 284 306 0.97
4 7 0.02 1.4 9.5 3.8 1 23 350 372 350 372 0.99
5 7 0.033 2.2 8.9 0.7 1 23 380 402 380 402 0.97
6 7 0.0045 0.3 11.6 0.2 1 23 407 429 407 429 0.96
7 7 0.00033 0.022 15.2 2.6 1 23 484 506 484 506 0.98

Sequence Information

Coding Sequence
ATGAACAATCAACTCAACCCGGCCACCTACCgcaaattcaataatttgctCAGCAGCGGCGCAGTCACCGTCACCGGTCCCGGCCAGCCACGCATATTGAAGACGACGCGTCTGGCGACGCCCGCATCGAACGtcgcagcgcagcagcagcaaagcatgATGGACTCGGATGCAGCTGCACGTTGTTATATCTGTGACGAGCCACTCTTGGCCAGTCAGACTCAGACATCGCTAACTGATATGTGCACCACGCACACCTCCACCAAATTTCCGAATAAGCTGGCCCAGCTGGTAGGTGAGGGCTTCTTGGTGATTGTGTGCAATGAGGATTTCGTTTGTTCGCGCTGCACTAATCTGGTCAACTACTTTGATCGCTTGGAGAATGACGTAGAGCGTGTAAAGTCGAATCTTTTAAACTTGCTTAATAAAAAGTATGGCATCAACGAGGACAGCGGCGGCAGTCATGCAGACGCCGCTAGTCCTCCGCTCAAGATGCAAAAGCTAGCCGGTGGCGTAGGCAATCGCTCTATGGAGGAGTCTGGAGGCGGTGAAGTGTTGCGCACACGCAAACTTGTGCAGCAGTCGACGCCAGTctcgcagcagctgaagctggcCACAGGTTCACAAGGCACTGTTGGCGGCACACAGACTGCAGTACAACGTAAGGCAACAAAGATTTACAAGTGCACCTCGTGCGATTACAAGACCTCGGACATGCGTCTGTTTAACACTCACTACGAGACCTGCAAACAGCAGACGTTCCAGTGCAAGACCTGCCGCAAGATCTTCCCACATTTTGGTGCCATGAAGCAGCACATGGTCCGGGATCATAATACGGCTATGGACAACACGTGCGCGATGTGCCACATCAATTTCGTTAACGAGGCCAGCCTGCGCAAGCACATGGAAACCAATCATGCTACAAATGTGCTGGTCACTAGCACCACAACCAtaccagctgctgcagcacctgttacagcggcagctgctgctgctgctgcagcagccggtGTCACTGAATCCATTGGCGCATCCGGCTCAGCTCTGTACACATGTAATCACTGTCAGTTCAAGTCGACCGACAAGGGCGTCTTTGATGAACACATGCGCAAACATGTCAGCGGCAAGCCGAAGCCCTTCAAGTGTCGTCTCTGTTCGCAGCGCTTCGAAACGCGTGAAGCAGCCACCATTCATGCCAAACAGCATCAGACGAACTACTTCAAGTGTGGCCAGTGCGCCATGACGTTCCCCAAGCGAGAGCTGCTGGTCAAGCATGTTGAGCTACATCAGGCTGAGAAGTTGAATGCTGCAAGCGGTGGCAGCCAGAACTTGAACACACAAAAGCTGCTGCAGGAGACTATTGATGAGGCGCTCAGCGATAGCGTGCCGGCTCAGGCAGGCGCTACTGTTGTGGCCAACGCTGCTGAGGCTGAGAATAACATACGTTTCTTCTCATGCAGTATTTGCTCGCTGACCTTCATCCAGGAGACGTACTACAATCACCATATGGAGACGCATAGGCGCGATAAGAAGGGCTCAGCTGCTGGCGGTGGCGGTACCACAGCCCTCAACTCGGCAGCCACAGCCCTGCTCAGCGATGAGCCTGGAGATGCGGGCGCTGGCGCCAAGGAGGAGCTCAACGAGCAGAATGCCGAGGCGGATATTGAGAGTCTGTTTGAGAAATTGCATTCGGATAAGAACGATAGCGAGAAGACCGGCAAGAATGAAATGGTCATCACCTCACAGGAGGGCAGCGGTGGCATCACCTTCAACATAACCATACCACAAGTGGATGCCAGCGGCGAGCAGGCAGAGAAGCATTCGCCAAACTCGCAGGCACCCGTTTCGGTGAGCATTGACATGCCTGTGCTTGACCAAGCCGAGGAAGACGAGTCACAATCCCaaagcagcaacgacaacaaagcAGCCGATGCTAGAGATGGCGGCAAGTCGAATGCAGCGCCTGTCTCGATGCCCAGCCTAGACGATGATAatgaggcagcggcagccagtGCAGCGGACACAACTGACGGCAATACGGCCAGCAGTGGCAAGGCGAACGAGAAGGTCGGTGCCAAAGCAGACCAATCAGCAGCTAAAGACAAGTCCAAGGAGGCCGAACAATCTGGCGACGCCGAGGGCGACGCAGAGAAGCGCGAAGCCAATGAAACACCAACTGCCGAGCAAGCAGCTGAATCGGAGGCAGCGGCCAACGAAGCTGCCGAAGCtgaggcagctgccacagctgagGGCGAAGCAGCAGAAGGATCCGGAGGCGAACAACAGGTGGCCATGGAGTTGGATGAGGCCATGCAAGCCCAGGTCGATGGCGGCCAGATTAAGTTCATTGTCAATGAGAACGGACACTTGCTGCAGCTGGACAACCACATACTGACCGATGCCGATGGCAATCAGATCATAGTACAAGATCCAGAGCAAATCCAGCAATTGCTGCAAAGCGTGGGCGTCCTACAATCGGGCGAAGGTCTCGAGGGCGAAACTTTGCAAATGATGACCGACGGAAGTGGTCAGATGGTGCTCGTCCATGGCGACAACAATGAGCAGCAGCTTATCGACGCCTCGCTCCTTAATTCCGAGGgccaaataataatacagcAAGGTCAGGATGGTGAGGAGGGACCGCATGTCATCAGCGAGGATGGCACACGCATACCAGTCTCCGTCTCTTACAATGAGGAAGGCCAGCCCGTTATTCAGGTGCAACAGCAGGTGCTGGAGGCAGCGCAAGCGGGCGCCGAAGAAAaggaagctgcagctgcaggtcAGGAGGAGGCTGCCGAGGAGGCGCAAACAAGCGAAACGGTGACAGTGACcacggcagctgctgcggttACCACCAGCACAGCCAGCAGTAGCACCGGTGGCACCGCTGGCTTCTTTGCGCTGGAAGAGTTCGCCGAGACGAAAACGGACTAG
Protein Sequence
MNNQLNPATYRKFNNLLSSGAVTVTGPGQPRILKTTRLATPASNVAAQQQQSMMDSDAAARCYICDEPLLASQTQTSLTDMCTTHTSTKFPNKLAQLVGEGFLVIVCNEDFVCSRCTNLVNYFDRLENDVERVKSNLLNLLNKKYGINEDSGGSHADAASPPLKMQKLAGGVGNRSMEESGGGEVLRTRKLVQQSTPVSQQLKLATGSQGTVGGTQTAVQRKATKIYKCTSCDYKTSDMRLFNTHYETCKQQTFQCKTCRKIFPHFGAMKQHMVRDHNTAMDNTCAMCHINFVNEASLRKHMETNHATNVLVTSTTTIPAAAAPVTAAAAAAAAAAGVTESIGASGSALYTCNHCQFKSTDKGVFDEHMRKHVSGKPKPFKCRLCSQRFETREAATIHAKQHQTNYFKCGQCAMTFPKRELLVKHVELHQAEKLNAASGGSQNLNTQKLLQETIDEALSDSVPAQAGATVVANAAEAENNIRFFSCSICSLTFIQETYYNHHMETHRRDKKGSAAGGGGTTALNSAATALLSDEPGDAGAGAKEELNEQNAEADIESLFEKLHSDKNDSEKTGKNEMVITSQEGSGGITFNITIPQVDASGEQAEKHSPNSQAPVSVSIDMPVLDQAEEDESQSQSSNDNKAADARDGGKSNAAPVSMPSLDDDNEAAAASAADTTDGNTASSGKANEKVGAKADQSAAKDKSKEAEQSGDAEGDAEKREANETPTAEQAAESEAAANEAAEAEAAATAEGEAAEGSGGEQQVAMELDEAMQAQVDGGQIKFIVNENGHLLQLDNHILTDADGNQIIVQDPEQIQQLLQSVGVLQSGEGLEGETLQMMTDGSGQMVLVHGDNNEQQLIDASLLNSEGQIIIQQGQDGEEGPHVISEDGTRIPVSVSYNEEGQPVIQVQQQVLEAAQAGAEEKEAAAAGQEEAAEEAQTSETVTVTTAAAAVTTSTASSSTGGTAGFFALEEFAETKTD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00476960;
90% Identity
iTF_00510141;
80% Identity
-