Basic Information

Insect: Drosophila eohydei
Gene Symbol: salm
Assembly: GCA_035045825.1
Location: JAWNOT010000045.1:4652965-4659901[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 2.3e-06 0.00016 21.9 1.7 1 23 343 365 343 365 0.98

2 8 3.3e-05 0.0023 18.3 3.5 1 23 371 393 371 393 0.98

3 8 2.3 1.6e+02 3.1 2.5 5 23 628 646 625 646 0.84

4 8 3.4e-08 2.3e-06 27.7 0.2 1 23 652 674 652 674 0.98

5 8 0.001 0.071 13.6 0.9 1 23 684 706 684 706 0.98

6 8 0.052 3.5 8.3 0.1 2 23 921 943 921 943 0.96

7 8 1.1e-05 0.00076 19.8 5.0 1 23 1080 1102 1080 1102 0.96

8 8 8.9e-08 6.1e-06 26.4 0.7 1 23 1108 1130 1108 1130 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	2.3e-06	0.00016	21.9	1.7	1	23	343	365	343	365	0.98
2	8	3.3e-05	0.0023	18.3	3.5	1	23	371	393	371	393	0.98
3	8	2.3	1.6e+02	3.1	2.5	5	23	628	646	625	646	0.84
4	8	3.4e-08	2.3e-06	27.7	0.2	1	23	652	674	652	674	0.98
5	8	0.001	0.071	13.6	0.9	1	23	684	706	684	706	0.98
6	8	0.052	3.5	8.3	0.1	2	23	921	943	921	943	0.96
7	8	1.1e-05	0.00076	19.8	5.0	1	23	1080	1102	1080	1102	0.96
8	8	8.9e-08	6.1e-06	26.4	0.7	1	23	1108	1130	1108	1130	0.98

Sequence Information

Coding Sequence: ATGTGTTCAATATTTCGCAATCGCATTAATTACCGGAGCACAGGCACGCGCAGCGGCTCATCCAATGCAGGCAGCTCGTCGGTGGCCGATCCCACTAGCGACAGGGACAGTTTGCTAGCCAAGGAGCTCAGTGCGgatagcaataacaatggcaGCGCGGCAGACGGAACGCCAGATGCAGAGATGGAGCTACAGCTCGACGCGGAGCAGTCGCTGCCCTGCACGGATCAGCCGGAGAACAGCAATGAGGCGCTGGACTTGTCGGTAATCTCCGGCAGCCGTTTGCCCACGAGCGGGCATGTGGCACTAGAAGCTTTACAACATACCAAAGTGGCGGTGGCACAGTTTGCGGCCACTGCGCTGGCGGGATCTGTGTCCGATCCAAACGATCTGGCCATGGTCCAATCGACGATCTTCAATGTGCAGCGCCAGCACCTGATGCAGCTACAGCTCATCCAGCACCTACAGAGTCAATTGAAACGCGCGGGTGGCGTGGTAGCTGCGCTGAGCAGGCAAGGGCCCAACTATGCTGAGCCTGAAGACGACgaggatgaggaggaggagctgccGGAACACTCGGACCAGCCACATCCTGCCAAAGAGCAGGCGCGAGTTAATGGCGAGGCAGCACACATCGATCACGACAGGCTGCAGGAGAGTTCAAAGACTGAGGAACAGGACATGTGCAAGGAAGCGGAGCCAAGAGCGACTGAGTGCAATAGGGAACGAGTCGTGGCATCGGCCAAGTCAGAACAGGCGCGTGAGTTGGAGGCTGAAGtcgagcaggagctggagAGTGACTACAAGCCGATTATGTGCGACATCAGCTCTAGTCTGGCCTCAAGTATAATCACCAATCACGACCCACCGCCGGCGCCCAATGAGCCCAACTGCCTCGAAATGCTGCAGCGCCGAACCGAGGAGGTGCTGGACTCGGCCTCGCAGAGCTTGCATGCGGCCCAAATGCAGGAGGAATACTCGGAGTACGCCTCAAAGGAGGCGCAGAGTCGCGGCGAGATCTTCAAGCATCGTTGCAAGTACTGTGGCAAGATCTTCGGCAGCTACTCGGCGCTGCAAATACACCTGCGTTCCCATACCGGCGAGCGACCCTTCCACTGCAATGTCTGTGGCAGCAAGTTTACCACCAAAGGCAATCTGAAGGTGCACTATCAGCGCCATACGCAGATCTTTCCTCCCATGCTGTTGCCGCCTGTGGTCAACGGGGCACAGCCCTCGGCGTCAGCCTCCGAGCAGTTCGGCTCGCTGACACCCATACGCCTGCCCTTTGCAGCGCCAGCGCCTCTggcaccaccgccgccgccgatTGTGGGTCAGCTCAGTGGCGAGCACACGGCAttagagcagcagcaagcgtTGGCCATGCCCGGACAGCAACTTCAGCAAGCTGAGGATCTGAGCAAGCCAACCAGGGAGTTGGCGCATTCACCCATGCAACCCGCGCAGACACCCAAGTCCCTGCCCGAGCGTAGCAGAAGTCAAACTGCAACGGATGCTGTTCAGccagctctggctctggctctggagAAGGACAGTCCCAAGTCAACGACGCCACCAGCTGCAACGGCGAGTCGTCGCAATGGCAGCGTGCGCAAACGTCAGTCCAGCAATGGAGGTAGTCCGCCAGGTGAGGAGCGCGAGCAGTCCGAGCATCTGCAGTTAGTCAAGCTCGTGCGTCGCTCTTCGGCCAGTCGCGACGGTGCTGTTGCTCTGCCAGGTGAGTACTCACTCGCGCAGATGGAGCGCATCATAGACAAGTCGTGGGAGGATCTGATCGAGATCGACAAGACATCGGAAACGtcaaagctgcagcagctggtggACAACATTGAGAACAAGTTGACCGATCCGAATCAGTGCATTTTCTGCCAGAAGGTCATGTCCTGCCGCAGCTCTCTGCAGATGCACATACGCACCCACACTGGCGAGCGACCCTTCCGCTGCAAGATCTGCGGACGCGCCTTTGCCACCAAGGGCAACTTGAAGGCGCACATGAGCATACACAAGATTAAGCCGCCCATGCGCAGTCAGTTCAAGTGCCCCGTGTGCCACCAGAAGTTCTCCAACGGCATCATCCTGCAGCAGCACATTCGCATCCATACCATGGACGATGGAAGCGGCAATCAGGTGCATGGTCAGGGCCAGGGGCAAAGTCTTGGCGCTGGTGAGGCTGAACGCTTGGGCATTGAGGACCAGAACTCCAACAAGTCAATGGGTACTTCAGACACTCTGGACTTCTCGACAACCATTTCGGATCACTCTGGCCAGAGATCGGAGTCGTCGCAGGGAGGCGATTTCGATGAGTTCATGACCATGGACAGCACTGACGATTCCCGCGACAACTCGAGCGCGGCCACCACGACACTTCTTGACAGAGACAGACGGCCGATGACGAGCCACGATGACGAGCGCTCCAGATCGGATCTGGATGGCGGTGGGCGTGAAAGCAACAGCGGCGAAATGCCCGCAATGGATCTTTCATCGCCGTCTTCGTCGtcagcatcagctgcagcggcagcggcagccgcggCTGCGGCGCGACTCTTTGGAGTCGGCAACAGTGCGGCAGCAggcgctgctggtgctggagcTTTGCCGATGCTTGGCATGCCCATGCCGCCGAATCTCTTACTGATGGCCGCGGCGCGCGAGGAGATGCATGCGCTAGGCCAGACGCATGCCAAGTTCCCATTGCTGCCCTTCGGACCGCTCGGCTTAATGGGCTTGCAGCCGCCCCCAAATGTGTGCAACTTGTGCTTCAAGATGCTACCCAGCCTGGCCGCCTTGGAAAGCCATCTGCAGAGCGAACATGCCAAAGAAATGACGGCTCCTTCCGCCCGAGCCCACTGCAACGAAACTGCAGCACCATACGGAGCAAAGCTCACTCTCAATCCCAATCTATTTGCCAAGAAGCCGAAGCTGCcgcagcagtcgcagccacAGGAGTTGGCGCCAGCGGAGTCAGTCACGCCATCGGCGGCATCCATTAAAGAGGAGCCTGACTCCGACCAGCTGCTGGTCGATGAGGGTGGTTGCGACAGTGgtgcagctccagcagcttCCGGCTATCAGCACGAGGCAGCCGGCGATGCGGAGCAGTCGCTGATGAAGATGCAGTTGCATGCTCATCGTTTTCCAGCTAGTCCGCTGGACTTCCAGCAGGCCTTGATGTCAGCCGGTCCGCCCAGCTCCAGTCTCGATCCGCCTGTGAACAACAAGCACTTCTGCCACGTCTGCCGGCGCAACTTCAGCTCGAGCTCAGCTCTTCAGATTCACATGCGTACTCACACCGGAGACAAGCCCTTCCAGTGCAACGTCTGTCAAAAGGCCTTCACCACTAAGGGCAACCTGAAGGTTCATATGGGCACGCATATGTGGACGAATCCTACATCTCGTCGTGGCCGGCGAATGTCCTTGGAGCTGCCAATGCGCCCCGCACCTGGCCCGGGCACGGCACATGGCGCGCCCTCGGCTGAGCAGGAGTTCATGCAACGTCGACCGGAACTCTTTTTTCCTTACTTGCCACCTTTCTTTAACGGAATTCCGCCTAAGCCCGGAGAATTGAGTCCTGGTGCATTTGCCAACATACCTCCGCCGCACTTTGCAAACGGAGCTAAATATCCGTATCCGCCTGGTCTGCTGGGCTTTCCCGGTTTCTTGGGTGGTGCTGGAGCTCATCACCAATATCCGCATGGCGTGGAGAGAAGTAGCAGCAAGTCTCCCACACCGGAGCCGGCGCAGAGTCCTGCCTCCCGGGAGGACGACGGAGCTCTAAGCAGCAACATTTGGCATCCGCTGAACAGCATCAAGATGGAGAACAATCAAAACGAGAATATTGGCAATCAGAGCGAACTGGAGCAGGAGGACAATGGTGCTGCAGATGCGGATGCGGAACCAGAAGCTGAgcctgcagctgcggctgcaactacagctggagctggagctgacgAATCGGGTTCCCAGGGCTGCGAGAAGTAG
Protein Sequence: MCSIFRNRINYRSTGTRSGSSNAGSSSVADPTSDRDSLLAKELSADSNNNGSAADGTPDAEMELQLDAEQSLPCTDQPENSNEALDLSVISGSRLPTSGHVALEALQHTKVAVAQFAATALAGSVSDPNDLAMVQSTIFNVQRQHLMQLQLIQHLQSQLKRAGGVVAALSRQGPNYAEPEDDEDEEEELPEHSDQPHPAKEQARVNGEAAHIDHDRLQESSKTEEQDMCKEAEPRATECNRERVVASAKSEQARELEAEVEQELESDYKPIMCDISSSLASSIITNHDPPPAPNEPNCLEMLQRRTEEVLDSASQSLHAAQMQEEYSEYASKEAQSRGEIFKHRCKYCGKIFGSYSALQIHLRSHTGERPFHCNVCGSKFTTKGNLKVHYQRHTQIFPPMLLPPVVNGAQPSASASEQFGSLTPIRLPFAAPAPLAPPPPPIVGQLSGEHTALEQQQALAMPGQQLQQAEDLSKPTRELAHSPMQPAQTPKSLPERSRSQTATDAVQPALALALEKDSPKSTTPPAATASRRNGSVRKRQSSNGGSPPGEEREQSEHLQLVKLVRRSSASRDGAVALPGEYSLAQMERIIDKSWEDLIEIDKTSETSKLQQLVDNIENKLTDPNQCIFCQKVMSCRSSLQMHIRTHTGERPFRCKICGRAFATKGNLKAHMSIHKIKPPMRSQFKCPVCHQKFSNGIILQQHIRIHTMDDGSGNQVHGQGQGQSLGAGEAERLGIEDQNSNKSMGTSDTLDFSTTISDHSGQRSESSQGGDFDEFMTMDSTDDSRDNSSAATTTLLDRDRRPMTSHDDERSRSDLDGGGRESNSGEMPAMDLSSPSSSSASAAAAAAAAAAARLFGVGNSAAAGAAGAGALPMLGMPMPPNLLLMAAAREEMHALGQTHAKFPLLPFGPLGLMGLQPPPNVCNLCFKMLPSLAALESHLQSEHAKEMTAPSARAHCNETAAPYGAKLTLNPNLFAKKPKLPQQSQPQELAPAESVTPSAASIKEEPDSDQLLVDEGGCDSGAAPAASGYQHEAAGDAEQSLMKMQLHAHRFPASPLDFQQALMSAGPPSSSLDPPVNNKHFCHVCRRNFSSSSALQIHMRTHTGDKPFQCNVCQKAFTTKGNLKVHMGTHMWTNPTSRRGRRMSLELPMRPAPGPGTAHGAPSAEQEFMQRRPELFFPYLPPFFNGIPPKPGELSPGAFANIPPPHFANGAKYPYPPGLLGFPGFLGGAGAHHQYPHGVERSSSKSPTPEPAQSPASREDDGALSSNIWHPLNSIKMENNQNENIGNQSELEQEDNGAADADAEPEAEPAAAAATTAGAGADESGSQGCEK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00475377;
90% Identity: iTF_00559655;
80% Identity: -