Basic Information

Insect: Drosophila eohydei
Gene Symbol: -
Assembly: GCA_035045825.1
Location: JAWNOT010000097.1:2262383-2264856[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 4.2e-05 0.0028 18.0 1.5 1 23 96 118 96 118 0.97

2 14 0.0078 0.53 10.8 6.5 1 23 124 146 124 146 0.96

3 14 2.4e-05 0.0016 18.8 0.9 1 23 152 174 152 174 0.98

4 14 7.3 5e+02 1.5 1.4 2 13 181 192 180 194 0.87

5 14 0.00018 0.012 16.0 0.1 2 23 198 219 197 219 0.97

6 14 2.3e-05 0.0016 18.8 2.3 1 23 225 247 225 247 0.95

7 14 0.0092 0.63 10.6 6.7 1 21 253 273 253 274 0.94

8 14 0.00064 0.043 14.3 0.5 1 20 425 444 425 445 0.95

9 14 0.00016 0.011 16.1 4.6 1 23 496 518 496 518 0.98

10 14 1.7e-05 0.0012 19.2 5.8 1 23 528 550 528 550 0.98

11 14 6.1e-06 0.00042 20.6 4.8 1 23 556 578 556 578 0.98

12 14 4.9e-08 3.3e-06 27.2 1.5 1 23 584 606 584 606 0.98

13 14 0.00033 0.023 15.2 3.8 1 23 612 634 612 634 0.98

14 14 7.5e-06 0.00051 20.3 3.0 1 23 640 662 640 662 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	4.2e-05	0.0028	18.0	1.5	1	23	96	118	96	118	0.97
2	14	0.0078	0.53	10.8	6.5	1	23	124	146	124	146	0.96
3	14	2.4e-05	0.0016	18.8	0.9	1	23	152	174	152	174	0.98
4	14	7.3	5e+02	1.5	1.4	2	13	181	192	180	194	0.87
5	14	0.00018	0.012	16.0	0.1	2	23	198	219	197	219	0.97
6	14	2.3e-05	0.0016	18.8	2.3	1	23	225	247	225	247	0.95
7	14	0.0092	0.63	10.6	6.7	1	21	253	273	253	274	0.94
8	14	0.00064	0.043	14.3	0.5	1	20	425	444	425	445	0.95
9	14	0.00016	0.011	16.1	4.6	1	23	496	518	496	518	0.98
10	14	1.7e-05	0.0012	19.2	5.8	1	23	528	550	528	550	0.98
11	14	6.1e-06	0.00042	20.6	4.8	1	23	556	578	556	578	0.98
12	14	4.9e-08	3.3e-06	27.2	1.5	1	23	584	606	584	606	0.98
13	14	0.00033	0.023	15.2	3.8	1	23	612	634	612	634	0.98
14	14	7.5e-06	0.00051	20.3	3.0	1	23	640	662	640	662	0.98

Sequence Information

Coding Sequence: ATGAGCGCGATAATCGACGTGTCTTGTGTGAAAATTGAGCGCGACCAGGagccggagcagcagcaggagttcTATGGAGTCTTGGAGAACGCCAATTGTGCTCAGCTCAAAGCTGAACCACCTTTTACAGAGATGGACATAGGACCCATTAAAATAGATCCGGATGGGTTGAGAGTAGAGCCAGCAGACAAGCAGCAGACTGTAAAAAAGCCGGTTCCAAGAACTCGAATGAAGAagagagctgctgcagcagcagcggaCTCTTCAACTGTTGTCAAGGGACACCACCAGTGCGCACATTGTCCGCGGTATTTCGAACGCAGCGATGAGCTGAACATACACCTGCTAATACACACAGATAAACTATCCTACAAGTGTTCCTACTGCCCGTGTAGTTTCTCGCACAAATCTATCTACACTACCCATATGTTTGGACATACCGGGAAATTTCCACATCAGTGCCCTGATTGTCCGCAAGGATATATGAAATACGCAGATCTGATGAAGCATCAACGTACGCACATTGTCAAGGATATGAACAAATGTCCTTTGTGTCCGAGGAACTGCATACACAAGGGGAAGGGTTTTCTTCAATGTCCGCAATGTCCGCGCGTCTTTGCCAAAGGTTTCGAGCTGAAGATTCATCTGCAGATTCACAGCGACAAGTTGTCCTACAAGTGTCCACATTGCCCGAACAGCTTTGCCCACAAATCGAACTATATCGCTCACGTCTATGAGCATACGGGCGAATTTCCACACAAATGCCATCATTGTCCGAAGGGATTCATGAAGCGAAACGATTTGATCAAACACAAGTGCTCTGTGTCGAGCTCGCCCATTACCGTGAATCGCCAGCGGCAAAATGGAGCAAAGGCAATCATAGAAGCAAGCTGTATTGAAAAGGAGCCAGTGCAGCgagtggagcagctgcagcaaagcaaagctcCACCAAAACACACGCCTGAAGTTCAAAGGCGCATGAGTCCAAGAGTCAAAAAGCCTGCACTGGAATTGAAAACAGCAGAGAGcataaaaaaacacagaaaggagaagcagcagccgcagcagcaatcCATAACAAGTGCCTTAGTGAACTTGAAGAGTAAGGCTGATTTTCTGGAAAGCAATATCAAGCTGAAATTCATTAAAACAGAGCCGGAGGAGGAAGAGCAGCATAGCAAGGCAACACAGCAGCCATCAAATGTTAACTCGAGACTCGAAGCTAACAAAAATGTCGAGCAACCTGCAGTAAAAGTGAACAAGAGGCGCAGCTATAAATGCAACTTGTGCAGCAAGGAATTTCCCAActtacagcagctgcaactgcacgAAAAATGTTGCACCTCGTCGAGCAGGCAAACATCTGGAGTGGATAGCCATTGCTCGAGGAAGCTCCCACAGCCGTCCAGCACAACAGAGCAAAAACTCATTCATTCAGCTGAACGTACATATAAATGCCCGCCTGTTAGTAAGCTTGAAAGGCCATTCAAGTGTCCGCACTGCCCGTGCACATTTGAGAGCAACGTGAATCGAAAGAAACATTTGCAAGTCCATCAGAGTGAAGCGCCGAGCGATTGTCCTTACAAGTGCCCGCATTGTACAAGGACCTTTCAGCAAAAGTCGCATTTTCTGGTGCATCTACGTGGACATACCGGCGAACGGCCGTTTCAGTGCACCTACTGCACGAAAGGCTTCAAAGTCAGTCATGATCTGAAGAAACACCTGCGTAATCATACGGGCGAACGTCCCTATGAATGTCCGCATTGTCCGAAAACCTTTGCGCAGAACTCGAATTTCAATTCGCATCTGCGTGGACATGCAGGCGAAAGACCCTACCAGTGTCCGCATTGTCCGCGATCCTTTCTAAAGGCCTACAACTACAAGGTCCATCTGTGCATCCATACGGGCGAAAAGCCCTTCAAATGTCCATACTGCCCGAAATCCTTTGCCCAAAGCTCCTATTGCAAGGCGCATCAGCGAGAGCACACGAAATGA
Protein Sequence: MSAIIDVSCVKIERDQEPEQQQEFYGVLENANCAQLKAEPPFTEMDIGPIKIDPDGLRVEPADKQQTVKKPVPRTRMKKRAAAAAADSSTVVKGHHQCAHCPRYFERSDELNIHLLIHTDKLSYKCSYCPCSFSHKSIYTTHMFGHTGKFPHQCPDCPQGYMKYADLMKHQRTHIVKDMNKCPLCPRNCIHKGKGFLQCPQCPRVFAKGFELKIHLQIHSDKLSYKCPHCPNSFAHKSNYIAHVYEHTGEFPHKCHHCPKGFMKRNDLIKHKCSVSSSPITVNRQRQNGAKAIIEASCIEKEPVQRVEQLQQSKAPPKHTPEVQRRMSPRVKKPALELKTAESIKKHRKEKQQPQQQSITSALVNLKSKADFLESNIKLKFIKTEPEEEEQHSKATQQPSNVNSRLEANKNVEQPAVKVNKRRSYKCNLCSKEFPNLQQLQLHEKCCTSSSRQTSGVDSHCSRKLPQPSSTTEQKLIHSAERTYKCPPVSKLERPFKCPHCPCTFESNVNRKKHLQVHQSEAPSDCPYKCPHCTRTFQQKSHFLVHLRGHTGERPFQCTYCTKGFKVSHDLKKHLRNHTGERPYECPHCPKTFAQNSNFNSHLRGHAGERPYQCPHCPRSFLKAYNYKVHLCIHTGEKPFKCPYCPKSFAQSSYCKAHQREHTK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00520056;
90% Identity: iTF_00520056;
80% Identity: -