Basic Information

Gene Symbol
F54F2.9
Assembly
GCA_035045825.1
Location
JAWNOT010000036.1:10178932-10180655[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 4.2 4.7e+03 -2.2 0.1 4 17 26 38 24 45 0.56
2 3 1.6e-07 0.00018 21.5 0.0 4 38 307 344 304 345 0.86
3 3 9.1e-08 0.0001 22.3 0.1 3 43 400 445 398 447 0.80

Sequence Information

Coding Sequence
atggagttacacaacaaaacaacactGCCAGCGATATTATTTGGGCTACTGTTATTGTGCGGCTCATCCAACGCCTGGCACTCCGAGGAGCTGGAGATTTTCGACCTGGTCGAAGAGGTCAACAAGAACTTCTATGAATTTATGGGCATCAATCAGACTGCCACGAACAATGAAATAAAGCGCGCTTTTCGCACACTCTCCATTGTGCTGCATCCCGACAAGAATCCTGCCGAAGATGCCAACATCCAGTTTCGCAACCTCGTATCCATCTACGAAGTACTCAAGGATGCTTCTAAGCGTGAAAAATACGACAAAGTATTGCGCGATGGCATGCCCAACTGGAAGTCCGCCCTCTACTACTATCGCCGAATGCGTAAGATTGGCCTTTATGAGGGCGCCTTCATAATTTTCCTTATCATAACCGTGGGCCAGTATCTGTTCGCATGGGCAGCCTATCTGGAGACAAAGTACACTGCTGAGCTAGTATTTGGCTCCAAACTAAAGAAGCTGCAGAAacgcaacaaaaacattgaTATGGACGTGATTCTGAACGAGATCCCGATGCCTTCGCTCCTTAATACTCTGCCAATTCAAATACCAGTcgccatttggcatttgcctaGAACAATTAAGAATGGATTTAGCAAAGCCAATAAGCTCAAGCAGCTGGCGTTGGAGAAGCGCCGATTAGAAATTGAAGAGGCACGTCGTCTGGAGGAACAGGAGCGTGAAGCCGAAGAGCAGGTGCGTCTACGTAAAGAGCAGAAGGAGAATTTACGTAAGCGGAAGCAGAACGCAAAGGCACCTGAGAAGACCGAGGAGGAGTTACGTGGCTATTCACAAATCCAGGCACGGGAGCTAACAGAAGAAGATGCAATACGTCCAGCTACGCAAAAGAGCACGGTCAGCGGCGGCTTTTGGACCGATGAGGATCTTACTGAACTAATTAGGTTAGTTAAAAAATATCCAGGCGGTGCTGGCAGTCGCTGGAACACTATAGCCGAATCCATGAACCGCAGCGTACAAGAGGTGACATTCATGGCGGCCAAGATGAAGGAGAACGGCTACCGTATACCTGGCCAAACGGATAGCGTTGCCGAACACATAGTCCAGGAATCACAGGAGGCAGTCCGCAAGGAGAAAGTCAAGAAGGTGGCACCAACCGTAAATGAGAAGAGCATGCTTGTACCGGAGACTAACTGGACTCAGGATCAGCAGCGTGCTCTCGAAGCGGCCATTGTTAAATACCGAAAAACTGCCGGCGGCGATCGTTGGGTAAAGATTGCTAACAGTGTACCAGAAAAGACCAAGGAGGAGTGCTTAGTGCGCTATAAATACTTGTGCGAACTGGTCAAGACACAGAAGAAGGCCGAGGTTGAAGGGGCGGACGGAGAGTCGATCATTGACGGCGAGGAGAAGGAAGGCGTAGAGCGAACAGCAACGGAGACTCCTGATGTCACTCCTGCTCCTGCGGCTGCACCGCCAGCCAAAAAGCTGAGCAAACGTGAGCAACGACGACGCAAACGCGATATGTCCAGCGAGGAGGACTCTGATGATGCATATCAATATGAAATCAGTTAG
Protein Sequence
MELHNKTTLPAILFGLLLLCGSSNAWHSEELEIFDLVEEVNKNFYEFMGINQTATNNEIKRAFRTLSIVLHPDKNPAEDANIQFRNLVSIYEVLKDASKREKYDKVLRDGMPNWKSALYYYRRMRKIGLYEGAFIIFLIITVGQYLFAWAAYLETKYTAELVFGSKLKKLQKRNKNIDMDVILNEIPMPSLLNTLPIQIPVAIWHLPRTIKNGFSKANKLKQLALEKRRLEIEEARRLEEQEREAEEQVRLRKEQKENLRKRKQNAKAPEKTEEELRGYSQIQARELTEEDAIRPATQKSTVSGGFWTDEDLTELIRLVKKYPGGAGSRWNTIAESMNRSVQEVTFMAAKMKENGYRIPGQTDSVAEHIVQESQEAVRKEKVKKVAPTVNEKSMLVPETNWTQDQQRALEAAIVKYRKTAGGDRWVKIANSVPEKTKEECLVRYKYLCELVKTQKKAEVEGADGESIIDGEEKEGVERTATETPDVTPAPAAAPPAKKLSKREQRRRKRDMSSEEDSDDAYQYEIS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00616831;
90% Identity
iTF_00519850;
80% Identity
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