Basic Information

Gene Symbol
cdc5l
Assembly
GCA_035045825.1
Location
JAWNOT010000069.1:3256407-3258806[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 2.6e-10 2.9e-07 30.5 0.0 1 41 238 279 238 284 0.91
2 4 1.1e-06 0.0012 18.9 0.0 2 44 294 340 293 342 0.91
3 4 7.1e-07 0.00079 19.5 0.0 3 46 350 394 348 394 0.92
4 4 6.5e-11 7.3e-08 32.4 0.0 2 43 401 443 400 446 0.95

Sequence Information

Coding Sequence
ATGTGCGATGTAGACAACATTAAGTTGGATcatcaacagctgctgcaggaaATTACTACGTTGTTGGCGGCTAACACAGAGACAAGCGATGCTAATGCCTTGCAATTGAATCAAGAACTTCAGCGGCGCCTGGAACAGGTGCGCAGACGTATATTAAAGTTGTTGGAGATAGTGCGCGGCCGCTACAAGCGCAACGAGCAGACACTCGTACGCCGCCAGAAACCACGCTCTTACATCGTCACAGCAGATGGCCCTGAAAGCGTAAGCAGGAGCGGAGCAGTACTTCGCGGCGGAACATTTCGTTTTAAGGGCAATCTATACTTTCGCGATGTCGATGGACGTAGCTGTCCTAACAATGACGACTACGTACGACGTTGCAGCACCGAAATGTTTCCCACCGATTTCGATATGCGCTCTAAGCACGTCTGGACAGTGCTAGACAAAAAGAACGTCGTCATGGGAATTAAGCAGCAGTTGTTGGATCATGCCAGCTATCAGGCCGCAGCAGCGAATAAATCGTTCAACAATATCAATGAGCGCAAACGCAAGGGCATCGATTTGCATGTTCAAACTGTGGCCAGTTTGTTAGCTAATGCCGACAATAATTTCAGCATCGACTGGAATCAGATTAGCACACTGGATCTCGAGCATCGTCACTCGTCCTACAGCTGCGAGGCAATGTGGCTGGTGTACCTGCAGCCTCAGCTAAGGCGCGACGACTGGACAGCTGAGGAGGATAAAGCTTTGCTGGCCGCAGCTAAAGCCAACAAGCTACAAAACTGGCAAGCCATAGCGGAAGCAGTGAGTCAGCGATCCGACTATCAGTGCTTTGTGCGCATGCAGACAACATTGCGCTTTCACTTGGAACCGACAAGTACGATGCGATGGAGTCATGAGGATAATGAACGTTTGTGCGCCGTTGTCCAGCGAAATACGGTGAATGGGTTGACCAACTGGTCGCAAGTGGTCGAACATTTCCCGGGCAGATCACGATCTACATTAATTGGAcgctatatgtatgtgctaCATCCCAGCATCAGTCACGCTCCTTTTACACCCAGCGAGGATCTCATGCTGTTCGCTGCCGTTGAGGAGTACAATggcaaattcaattgtttCCCGCGTAATTTGTTTCCCAATCGGTCGCTGGCCCAGCTTCGCACACGATATAACAATGTGCTGGCACAGCGGAGTAAAACCGATCCCTGGTCCATGGATGATGACACAAAGCTAATGAGTTTTGTTACCGAACATGGTACCTCACAGTGGGTGAAGTGTGCCAATCATTTGGGCAATCACACACGTACCAGCTGTCGTACACGCTTTCTGGTCATCAAGCGTTTTCTTGAGCAGCATCCGGATGCGACAGTGAGTGACATTCCACGTCGGAAGATCACTAAAAATGCTCCAGTAACCGCCGAGAATTGGGCTCAGCGTTTGCAGGAATGGCAAGCTGACCCGGATTCACTGGTCATCGATCTCGCCCACAAGCCGAAACCAAAAAGACCCAAGTTTGAAACGGCCATCAATGGCAATTGTTTGATGCCATTGCGCGGCGTTGACTCGCACATCTACGAGTACTTCAAGTATTCCTACAATCTGAAACTTCATGCTTCGCCAGCACCAATTCCGCTCCCATGCAACGAACGTAATCTATATGTGGTGGCCAATGCCCTACGCTACAGGCCACAAGCAAATGCTACCCAACTGGTGCAGAGCATCGCACTGAACAAGCAGTTAAATCGGTGCTACAGCAAGATGATGCGTCAATTGCCCGCCATGGAGGCAAGTGAATCAGCTGCGGccccattgctgctgccgcccaATTGGTCCACAATGATGGGCTTTCGTGCCATATGCATCTTGTCAGTGCATTGTCGCAATCACGCGAAAATATCGAGTGAGCTGAAACCTGCCGTAAGCTATGATGAATCGCAGGCAGCAGTACAGCAATTCCGGCAACGATTACGCACCCTTTTCTATACCACCACACTGCTGAGTCGGCTGGAACCGCCTTCATTTGAACAGCTTCCCTCGGCTTTAATGGCACTGCCGCGACCAGCTGTAAGCTATGGTGCGACAAAGAAATCTGATCCGCCGACATCCACACAGCTTCAGAAGCAAACCCGTCAGAAGCACGACTCATCCAGAGACGTAAGTAGTCTGAACGCTCAAAAAATAGCCCGCCGACAAATCGAAGAACTGGACCGCATGGCACAATCGCAGAAGAGTTTTAAATCTGAGTTTAAGGATGAGCCAAATGTTAAGCAGGAACTGTCTTACGAATAA
Protein Sequence
MCDVDNIKLDHQQLLQEITTLLAANTETSDANALQLNQELQRRLEQVRRRILKLLEIVRGRYKRNEQTLVRRQKPRSYIVTADGPESVSRSGAVLRGGTFRFKGNLYFRDVDGRSCPNNDDYVRRCSTEMFPTDFDMRSKHVWTVLDKKNVVMGIKQQLLDHASYQAAAANKSFNNINERKRKGIDLHVQTVASLLANADNNFSIDWNQISTLDLEHRHSSYSCEAMWLVYLQPQLRRDDWTAEEDKALLAAAKANKLQNWQAIAEAVSQRSDYQCFVRMQTTLRFHLEPTSTMRWSHEDNERLCAVVQRNTVNGLTNWSQVVEHFPGRSRSTLIGRYMYVLHPSISHAPFTPSEDLMLFAAVEEYNGKFNCFPRNLFPNRSLAQLRTRYNNVLAQRSKTDPWSMDDDTKLMSFVTEHGTSQWVKCANHLGNHTRTSCRTRFLVIKRFLEQHPDATVSDIPRRKITKNAPVTAENWAQRLQEWQADPDSLVIDLAHKPKPKRPKFETAINGNCLMPLRGVDSHIYEYFKYSYNLKLHASPAPIPLPCNERNLYVVANALRYRPQANATQLVQSIALNKQLNRCYSKMMRQLPAMEASESAAAPLLLPPNWSTMMGFRAICILSVHCRNHAKISSELKPAVSYDESQAAVQQFRQRLRTLFYTTTLLSRLEPPSFEQLPSALMALPRPAVSYGATKKSDPPTSTQLQKQTRQKHDSSRDVSSLNAQKIARRQIEELDRMAQSQKSFKSEFKDEPNVKQELSYE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00476550;
90% Identity
iTF_00519846;
80% Identity
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