Basic Information

Gene Symbol
grh
Assembly
GCA_035045825.1
Location
JAWNOT010000072.1:10783232-10815795[-]

Transcription Factor Domain

TF Family
CP2
Domain
CP2 domain
PFAM
PF04516
TF Group
Beta-Scaffold Factors
Description
This family represents a conserved region in the CP2 transcription factor family.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 0.53 3.1e+03 -2.8 7.3 33 110 148 249 116 294 0.51
2 3 0.83 4.9e+03 -3.5 2.8 96 125 513 523 484 540 0.50
3 3 3.8e-63 2.3e-59 200.4 0.5 24 221 652 844 638 846 0.94

Sequence Information

Coding Sequence
ATGATGCAGGATGCTAGCAGCAGCTATGCCATATCCTATACAGACTGGATAGCCGAGTCAcgGCGCAGCAGCTACAGCCTAgacgcacagcagcagcagcagcaactgcatcagctgcagcatctgcagcagcagcagcatttgccgCAGCATCTACCTCAGCATCATTATGGCAGCCAATCGCCAACGCGTTACTACGAGCCGCccaagcaggagcagcagcagcagcagcagcagctgcaacacctGCCACTCACTGCCGCTGGGCTAATGCAGTCAGTGGCAGATGAGATACAATTGAGCGAGCAGCAGGCGACGCCGCCgcccccagcagcagcagcagcagcagcagccagcgaggCCGCAGCTTCCAATGCCGTCGCCAACGCCTCCTCCTCTGCCAGCTCCGCCTCTCCCTACGCTGTCTACAGCTACTACAGAGATGTCGATGCTAAcagatcacagcagcagcagcagcagcagcagcaacttgtgTGGAGCAATGCGAGCAGCGCCGGCAAACTGAATGGCCAGACCACACCTATCGATGTCTCTGGCCTATcgcaaaatgaaattcaaggCTTTCTGCTTGGTTCACACCCCTCATCGTCGTCCGCCACAACCGGCGTTGTctccacaacaacaatctcgcatcagcagcagcaacaacagcagcaacagcaacagcaacagcagcaacagcagcagcaacaacaacaacagcatcaacagcagccgccacaTCCCAGCGACATTGTGACCATAACAACGGCAGGAGTGGGGAGCGCGGGCTCGATCGTCTCCgctgcagtgcagcagcagcaacagcaacagcagcagcaacaacagcagcagcagctgctgagcaTCAAACGTGAGCCCGAAGACTTGAGCAAGGATCCCACCAAGAATGGCAGCCTGGGCGCCTCGGCGAATGGTTCAGTCATAACGCAGAAGATATTGCGCGTGGATGCAGCTAGAAGTGAAGAAACtgaggcaactgcaactgcattcGATATAGCCAATaaaacggcaactgcaacagcaacagcaacagcaacaacaacaactgcaactgcaactagtCCCGCCAGAGCGACAGCAGATCTAGAGATGTATGCTACCACGGGCGGCACACAGATTTATCTACAGACCTCACATCAGAACAGCAATGGAACCAGCACACAGCAGAGCACATTGCAAGCCCAAAGTCCCAGTCCGGGTCCATATATCACAACGGATAGCTATGGCATGTACACGACGACACGACTGCCACCTGGACCGCCACCCGCCACCACATTCATAACGGAGCCCTATTATCGTGAATATTTCGCACCCGACGGCCAAGGCGGCTACGTGCCAGCGGGCACAGCGCGCAGTCTCTACGGCGAAGATGTTTCCGTCACGGCGGccgcacagccacagccggtGGGCGGTGTCTATGAGGCGCGCTTTAGCAGCAATGCGCCCACCACCACCACAGTGCTAACCAGCAGCAATGCACACCACCacagtcaacagcagcagcagcagcagcaacaacaacagcaacaacaacagcagcaacaacaacagcagcagcagcaacaggagcagtCGGGCAAGAACGGCGGGACGCCGCTCTATGCCAAGGCTATAACGGCGGCGGGTCTCACTGTGGACCTGCCCAGTCCCGACTCGGGCATTGGCACGGATGCCATAACGCCGCGGGATCAAAATCACATACAGCAGTCCTTCGACTATACGGAACTGTGTCAGCCGGGCAGCCTAATCGATGCCAACGGCAGCATACCCGTTTCAGTGAATAGCATACAACAGCGCACCGTGGTCCACGGCAGCCAGAATAGTCCAACCACATCGCTGGTGGATACGAGCACAAATGGATCGACACGCTCGAGGCCCTGGCACGATTTCGGACGCCAAAATGATGCtgataaaatacaaataccaaaaatCTTCACAAATGTGGGCTTTCGCTATAATCTGGAGAGCCCGATCAGCTCGTCGCAGCGTCGCGAGGACGATCGCATCACCTACATCAACAAGGGTCAGTTCTATGGCATTACGCTGGAGTATGTGCACGATGCGGATAAGCCAATCAAGAATACAACAGTTAAGAGTGTGATCATGTTGATGTTTCGCGAGGAGAAGAGTCCCGAGGACGAGATAAAGGCCTGGCAGTTCTGGCATAGTCGCCAGCATTCCGTGAAGCAGAGAATCTTGGATGCAGATACAAAGAACTCGGTTGGTCTCGTTGGCTGCATTGAGGAAGTGTCGCACAATGCCATTGCCGTCTACTGGAATCCGCTCGAGAGCTCTGCCAAGATCAACATTGCGGTTCAGTGCCTCAGCACGGACTTTAGCAGTCAGAAAGGTGTTAAGGGCCTGCCGCTGCACGTACAAATCGATACGTTCGAGGATCCACGCGATGCGACGGTCTTTCATCGCGGCTACTGTCAGATAAAGGTCTTCTGCGATAAGGGCGCCGAGCGTAAGACGCGCGATGAGGAACGCCGCGCGGCCAAGCGCAAAATGACAGCAACTGGACGCAAGAAGCTGGACGAGCTCTATCATCCGGTCACAGATCGTTCCGAGTTCTATGGCATGCAGGATCTGGCCAAGCCGCCAGTGCTCTTCTCGCCCGCCGAGGACATGGAAAAGAGCTTCTATGGCCATGAGACTGACTCGCCAGAACTGAAGGGCGCTTCGCCTTTTCTGCTGCACGGCCAGAAggtggccacgcccacgctcaAATTTCACAATCATTTTCCGCCCGACATGCAGACTGATAAAAAGGATCACATATTGGATCAGAGTATGTTAACCAGCACGCCGATGTCCGACTTTGGGCCACCCATGAAACGGGGTCGCATGACGCCGCCGACCACGGAGCGAGTCATGCTGTACGTGCGGCAGGAGAACGAGGAGGTCTACACGCCGTTGCACGTGGTGCCGCCCACGACGATTGGCCTGCTCAATGCGattgaaaacaaatacaaaatatcaacaacgagcataaataacatatatcgCACAAATAAGAAAGGGATTACGGCGAAAATTGACGATGATATGATATCCTTCTACTGCAACGAGGACATTTTCTTGCTGGAAGTGCAGCAGATCGAGGATGATCTGTACGACGTGACGCTCACAGAGCTGCCCAATCAGTAG
Protein Sequence
MMQDASSSYAISYTDWIAESRRSSYSLDAQQQQQQLHQLQHLQQQQHLPQHLPQHHYGSQSPTRYYEPPKQEQQQQQQQLQHLPLTAAGLMQSVADEIQLSEQQATPPPPAAAAAAAASEAAASNAVANASSSASSASPYAVYSYYRDVDANRSQQQQQQQQQLVWSNASSAGKLNGQTTPIDVSGLSQNEIQGFLLGSHPSSSSATTGVVSTTTISHQQQQQQQQQQQQQQQQQQQQQQQHQQQPPHPSDIVTITTAGVGSAGSIVSAAVQQQQQQQQQQQQQQQLLSIKREPEDLSKDPTKNGSLGASANGSVITQKILRVDAARSEETEATATAFDIANKTATATATATATTTTATATSPARATADLEMYATTGGTQIYLQTSHQNSNGTSTQQSTLQAQSPSPGPYITTDSYGMYTTTRLPPGPPPATTFITEPYYREYFAPDGQGGYVPAGTARSLYGEDVSVTAAAQPQPVGGVYEARFSSNAPTTTTVLTSSNAHHHSQQQQQQQQQQQQQQQQQQQQQQQQQEQSGKNGGTPLYAKAITAAGLTVDLPSPDSGIGTDAITPRDQNHIQQSFDYTELCQPGSLIDANGSIPVSVNSIQQRTVVHGSQNSPTTSLVDTSTNGSTRSRPWHDFGRQNDADKIQIPKIFTNVGFRYNLESPISSSQRREDDRITYINKGQFYGITLEYVHDADKPIKNTTVKSVIMLMFREEKSPEDEIKAWQFWHSRQHSVKQRILDADTKNSVGLVGCIEEVSHNAIAVYWNPLESSAKINIAVQCLSTDFSSQKGVKGLPLHVQIDTFEDPRDATVFHRGYCQIKVFCDKGAERKTRDEERRAAKRKMTATGRKKLDELYHPVTDRSEFYGMQDLAKPPVLFSPAEDMEKSFYGHETDSPELKGASPFLLHGQKVATPTLKFHNHFPPDMQTDKKDHILDQSMLTSTPMSDFGPPMKRGRMTPPTTERVMLYVRQENEEVYTPLHVVPPTTIGLLNAIENKYKISTTSINNIYRTNKKGITAKIDDDMISFYCNEDIFLLEVQQIEDDLYDVTLTELPNQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00476386;
90% Identity
iTF_00544231;
80% Identity
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