Basic Information

Insect: Drosophila engyochracea
Gene Symbol: Sp4
Assembly: GCA_035042385.1
Location: JAWNLK010000107.1:1603520-1604812[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 5 0.00031 0.019 15.3 1.7 1 23 131 155 131 155 0.96

2 5 3.2e-08 2e-06 27.8 0.4 1 23 161 185 161 185 0.97

3 5 1.9e-06 0.00012 22.2 3.8 1 23 191 213 191 213 0.98

4 5 5.2e-08 3.3e-06 27.1 3.3 1 23 376 398 376 398 0.99

5 5 0.00036 0.023 15.0 6.9 1 23 404 426 404 426 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	5	0.00031	0.019	15.3	1.7	1	23	131	155	131	155	0.96
2	5	3.2e-08	2e-06	27.8	0.4	1	23	161	185	161	185	0.97
3	5	1.9e-06	0.00012	22.2	3.8	1	23	191	213	191	213	0.98
4	5	5.2e-08	3.3e-06	27.1	3.3	1	23	376	398	376	398	0.99
5	5	0.00036	0.023	15.0	6.9	1	23	404	426	404	426	0.98

Sequence Information

Coding Sequence: ATGTCCCAAGTAATTCCAAACACGCCCACACCACAAATGCTGAcgacatcaacaacaatgcatCAGAGCACAATTGAGAAAGTGAAACCAGCGCACTCCTTTCCCACAATTGGTGATGCGAATCACAGAAATGAACTGCCGCCGGCACCCGACGACGATTTGCTTAGGGCCTCAAACCCAAATATGTTTGAGGCCCTAAGCGACCATCTCAAGCACGATGCGCCAATGGATCTCGATAATAATGTACATAACAACACGGCGGagactgacaacaacaatttattaacgAATCGCGATCCTCTACACTTTGATGCTGGTGATCCGAAAATTCGAATTATGCCCTCGATCAAGCTGATGGCGGCACCGCATGCAGCGGATCCCAAGCGTAAATTCGTCTGTCCGTACGATAATTGCACGAAAAGCTATGGCAAAAGCTCCCACCTCCGCTCCCATCTCACGTGGCACACGGGCATTAAGCCGTTTGTGTGCTCAGAGCCGAAATGTGGCAAGGGATTCACACGGTCTGACGAGCTGAATCGTCACCTGCGCACGCATACGGGCGAGAAGCCCTTCGAGTGCATGCAGTGCAGCAAAAAGTTCTCGCGGAGCGATCATCTGACCAAGCATCTGGCGACGCACGATCGCCAGttgaagagcagcagcagcaatattcCGACGAAACGAAACTCCCTAGGCAACAGCGTGGGACGGGTGAAATCGTCAAAGAAGATTATCTCGGAGGCGGAGTcaggttttcattttatggccGTGCTCAGTGGCAATGTCGAATCGAGTTCCAATCAAAataatcagcatcaacagcatcagcagcagtcggCGGAAATTGCTGCTGATTTCGGGCATACGCCAATACGAATCAAATTGGAACGCCCGGAGCATAGTGACAAATATCAGATAATACCGCCGCCGCTACCGCCACCGATAACATCGATAGCCGATAACCAGTTGAGAAGCCAGCAATCGGTATATAGcgaaaagcagcaacaacagcaggccGAGGTGAAATACGAGCCTGCCGATGAAATTGTACGCACACTCTCACAACTACCGCCACAGGATGGTCCCTCCACCTACGGCATGCCTCATTTTGTACAGGATCGTCCGTTCCGCTGCCGTCAGTGCGAGAAGCGATTCAAGCGCCAAGACGATTTGAATCGGCATATTCGCACGCACACCGGCGAGAAGCCCTATGCGTGTAATCAATGCTGTCGACGCTTTGTGCGCAGCGATCACTTGAAAAAGCATCAGCAAACGCATTTAAAATCCCAATAG
Protein Sequence: MSQVIPNTPTPQMLTTSTTMHQSTIEKVKPAHSFPTIGDANHRNELPPAPDDDLLRASNPNMFEALSDHLKHDAPMDLDNNVHNNTAETDNNNLLTNRDPLHFDAGDPKIRIMPSIKLMAAPHAADPKRKFVCPYDNCTKSYGKSSHLRSHLTWHTGIKPFVCSEPKCGKGFTRSDELNRHLRTHTGEKPFECMQCSKKFSRSDHLTKHLATHDRQLKSSSSNIPTKRNSLGNSVGRVKSSKKIISEAESGFHFMAVLSGNVESSSNQNNQHQQHQQQSAEIAADFGHTPIRIKLERPEHSDKYQIIPPPLPPPITSIADNQLRSQQSVYSEKQQQQQAEVKYEPADEIVRTLSQLPPQDGPSTYGMPHFVQDRPFRCRQCEKRFKRQDDLNRHIRTHTGEKPYACNQCCRRFVRSDHLKKHQQTHLKSQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00576546;
90% Identity: iTF_00517192;
80% Identity: -