Dema013512.3
Basic Information
- Insect
- Drosophila emarginata
- Gene Symbol
- srp
- Assembly
- GCA_037075365.1
- Location
- JBAMCD010000221.1:27946468-27955729[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.7e-17 9.6e-14 51.1 3.1 1 34 706 738 706 740 0.97 2 2 1.3e-18 3.5e-15 55.7 2.7 1 35 808 841 808 842 0.97
Sequence Information
- Coding Sequence
- ATGACCAAGACTGGTAAAGCAAATAAGGAAAGGAACAATTTATTGACCAATGcagtaaaaatgaaattaaccaAGGCTCTGGCGAACGCCAAGACGCAGCAGCAAACCAAGCAAGGACGTGTAACGACTAcaactacagcaacagcaatataTACATCGGTGGTTTTAACAGGATCAAATGCCGAAGGCACCGACGAAAAGAAAGAGATGACAACAGAGGTAGCTGTAGGTACCGAGTCCAAAACCGACACCAAGACCGAGGCTGAAACAGCGACAGCGACGCTGACGCCGCAGCTAACGCTTGCCACAGCGAATTTATCGTCGTCATTTGAGTCCGCGCGCTTGCAGGCTCACACATCAGTTGTCAGCGAAGCACCAAAGCAAACGGTTACCACAACGATCGCGCCAGTGTCACCAAACGAGTCGTCAGTAATAACAATAGCACCAATTTCAACTGCATCGACAACTGCAAGTGCAGCCACAATAACAAATGCCACTGCAGCAGCAGTAATTGTGAATGtgataaatgataataaaccaaaaggagaacaacagcaacaagtaAGCGAGAACGCTAGTGAAAGTGTTgataacaaaatcaaagtaatcaACTATGCACATCAACAACTGGCACAGGAGCAACAAATCTACGAACATCAATTTATTGATCAGCAACTATTaagccagcagcaacaacaacagcataaGGAACAACATCAACACACCGGTTGGTTGACGGCTTACGATTTGACAAGCAATTCCTCAACCGGAGCAGACAAAACTGAATTCTACGCCTTGGCGGCACCACAGCACTTTCTGGCCCATTTGCCTTATCACAGCCACTCGCATAGCCATCCTCACCATTACGATCTTCACCAAAATCTCAATAGCACGGATTCAATGCGTAACAATTTTACTCTATATAGCCTGTATGGGAGCGGTGGAGGGACTCCTGATCATctgcaacatgttgctgctgtcaatgcagctgcagcagcagcggcggctgcagcagcggcttcatcatcagcatcatctcTGCCCCATGCCACATCGAATATTGATGAGGTCATTCAAGATACTTTAAAAGATGAGTGTTTTGATGATCCCCACAGTACTAGCTTTCATATGCTGACACCCGTCTCCGACCTACAGAGTCTCAAAGACCCAAATTCAGCTATATACTCTGTCACACATGAGCAACTCctgcagcaacatcatcatcaccagcaacagcatcacCAGCAACAAGAACTTCATCTTCAACAGCATCAGCCGCATCATCttcaaaataacaataataataacaacaattccaCTAGTTCTGTCGGTGGCGATTCACCCTCACCCACCAACGCCCTTTCCACTCTGCAAAATTTTACCCAGTTAAATAGCGCAGGACATCCCCGGGATAGTTATGGCGCCCTCTCGCCTGACCACAGCAATTATTTTACAACACCGCTGAGTCCTGTCTTGCAAACCAGctcTGTCTATGCGGGGCCTTTGCTTACCTCGACGGCAAATGGAATGCAATATGGTATGCCTTCTCCAACCCATAGCCATGTGCATCTCCATCAGCAACCTCttcaacatcagcaacaacatcacaACTCTACAAGTAGCAGTCCTGGACCTAGTTCTGGTCCACTGGGTACGCTTCATGCGAGCTCTTCGCCCAACCACAGTCATGTGCATCTCCATCAGCAAACTCATCAACACCCGCAACAGGAGCAGGCACATAATTCCACCAGCAGCAGTCCTGGACCTGGTTCTGCTCCATTGGGTGGAGGAAGTGGGGTAGGAGGTGGTACACTGCCTGCCTACGCTTCGCTGGCAAATTACCGCGGACATaacGAGGCCTGGTCTAATCATTACGAACCAATTAGTTATGCATCCACCAATGCATCCGGCCAAATACAGTCGCAACTGGGAGCCGGAGTCATACGCAATGGAAGGATCATAAGTGCGGCAAACACTGCAGCAGCAGTCGCTGCCAATGATGGAGGAGCCAGCAATGGTAGCGGTGTCGGTGTAGATCAGTCACGATTTCTTACTGCATCGGCATCGCTAACAGCATCATTTTTCGATGCCGATTTGTTCACTGAGGGGCGAGAATGTGTCAACTGTGGTGCGATTTCAACCCCATTATGGCGACGCGATAACACAGGACACTATTTATGCAATGCCTGCGGCTTGTATATGAAAATGAACGGCATGAATCtGGCCGCTGAATCAGGCGGGGATTTCTATAAGAACTACTCATTTAATGTGAGTAAGGCCTCCGCAAATGCCAACACCACCAGCACAACGTCAACGccagcggcggcggcggcggcaacAACAAGTACTACAGCGCTCGACGAGCAAGTTAGTCGCGCCAATTCGAGACGCTTGAATGCTTCCAGACGAGCCGGACTCTCTTGTTCCAACTGTTTAACTACCTACACCTCCCTATGGCGACGCAATCCAAGCGGCGAGCCTGTATGCAATGCTTGCGGTCTCTACTTTAAACTGCACAATGTGGCGCGCCCGCTAACCATGAAAAAGGACACTATACAGAAACGCAAACGCAAACCTAAGGgtacaaaaagtgaaaagtcaaagaaaaaagcaattgTATCGGTTAACAGTTTGGAGGCATCTAATAATAATGCGTCTTGCCACAATGCTAGTCTTTCTTTGGAGGGCCAAATGATGGGCGAAACCCATGAGGaaatgaaaacaattgcATACATGCCATACGCACCGCAactccaacagcaacaacaacaacaacaacagcagcaacaacaacagttacTAAACACTGAGCAACATACATCGGCGGCTAGCTCACCGCATAGCACGGCATCTTCATCACTATCGCCCTCAGCAACATTACAGCATCAacatcaccaacaacaacagcagcaagcgGTTTGCTCTGGGTTGGACATATCGGCATCGCCGTCATATCAAATGTCGCCCTTAAATatgcaacagcatcaacaatcAGCATGCAGCATACAACAGCATTCACCCAGCACGCCGACATCGGTATCAACTAGTATTTATCAGACGCCGTCGCCCACTCACTtgcaaaacaacaataacacactatttaacaacaacaatagcaatgaAAATACTAAATTTCTACAGAAATACCTGCAAAACCAACCAttgagcagcaacaacattgcagcggcagcagtggcagcagcaatcAGCAATTCAATAAAATCCGAACCGTCGACGGCCAGTTTATCAATAGCAGCAGCGGCGTCCACAACACTGACAACGGGATCGAGCACATTATCCTCACTGAgtcacaacagcaacaacattatcAGCTTGCAAAATCCCTATCACCAACTGGGAATTGGTCAGACAGCAATGCCATTGTGTAAGACAGGACGTGTCATGTCTCCTTCCTATTATTTGCCTGAAGACGATCAGgatcaccaacaacaaataaagcTTGAGCAGCAACATCATGTTGAAGAACTTTTGCTAAATCGTTCTGTATCATTAGACGAGCATTATGAACTGGCTGCTtatcaacaccaacaacatcagcaacagcagcaacaacttgcTGTTGCCAGCTACGCAATGCATGCAGCTGCCCAACAGCAACTGCATGAGTTTGAACGTAAATTTGTGGTTGATCGTGAAACTGTTGTCAAAATGGAATAA
- Protein Sequence
- MTKTGKANKERNNLLTNAVKMKLTKALANAKTQQQTKQGRVTTTTTATAIYTSVVLTGSNAEGTDEKKEMTTEVAVGTESKTDTKTEAETATATLTPQLTLATANLSSSFESARLQAHTSVVSEAPKQTVTTTIAPVSPNESSVITIAPISTASTTASAATITNATAAAVIVNVINDNKPKGEQQQQVSENASESVDNKIKVINYAHQQLAQEQQIYEHQFIDQQLLSQQQQQQHKEQHQHTGWLTAYDLTSNSSTGADKTEFYALAAPQHFLAHLPYHSHSHSHPHHYDLHQNLNSTDSMRNNFTLYSLYGSGGGTPDHLQHVAAVNAAAAAAAAAAAASSSASSLPHATSNIDEVIQDTLKDECFDDPHSTSFHMLTPVSDLQSLKDPNSAIYSVTHEQLLQQHHHHQQQHHQQQELHLQQHQPHHLQNNNNNNNNSTSSVGGDSPSPTNALSTLQNFTQLNSAGHPRDSYGALSPDHSNYFTTPLSPVLQTSSVYAGPLLTSTANGMQYGMPSPTHSHVHLHQQPLQHQQQHHNSTSSSPGPSSGPLGTLHASSSPNHSHVHLHQQTHQHPQQEQAHNSTSSSPGPGSAPLGGGSGVGGGTLPAYASLANYRGHNEAWSNHYEPISYASTNASGQIQSQLGAGVIRNGRIISAANTAAAVAANDGGASNGSGVGVDQSRFLTASASLTASFFDADLFTEGRECVNCGAISTPLWRRDNTGHYLCNACGLYMKMNGMNLAAESGGDFYKNYSFNVSKASANANTTSTTSTPAAAAAATTSTTALDEQVSRANSRRLNASRRAGLSCSNCLTTYTSLWRRNPSGEPVCNACGLYFKLHNVARPLTMKKDTIQKRKRKPKGTKSEKSKKKAIVSVNSLEASNNNASCHNASLSLEGQMMGETHEEMKTIAYMPYAPQLQQQQQQQQQQQQQQLLNTEQHTSAASSPHSTASSSLSPSATLQHQHHQQQQQQAVCSGLDISASPSYQMSPLNMQQHQQSACSIQQHSPSTPTSVSTSIYQTPSPTHLQNNNNTLFNNNNSNENTKFLQKYLQNQPLSSNNIAAAAVAAAISNSIKSEPSTASLSIAAAASTTLTTGSSTLSSLSHNSNNIISLQNPYHQLGIGQTAMPLCKTGRVMSPSYYLPEDDQDHQQQIKLEQQHHVEELLLNRSVSLDEHYELAAYQHQQHQQQQQQLAVASYAMHAAAQQQLHEFERKFVVDRETVVKME
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00484103;
- 90% Identity
- -
- 80% Identity
- -