Dema012767.1
Basic Information
- Insect
- Drosophila emarginata
- Gene Symbol
- pnr
- Assembly
- GCA_037075365.1
- Location
- JBAMCD010000221.1:22663440-22665176[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6e-18 1.6e-14 53.6 3.2 1 34 129 161 129 163 0.97 2 2 5.1e-19 1.3e-15 57.0 6.7 1 35 186 219 186 220 0.98
Sequence Information
- Coding Sequence
- ATGTATCATTCGAGTGCTGTGGCAGCAGCCGCCTACACAGATCTTGCGGCAGCGGGCagtgcagcagcagtagcCAACGCTGGCGTGGGTGTTGGTATAGGCCCCTCTGGCTATCATCACCAGCAGGCTGTCAATGCACCAGTCTATGTGCCCTCAAACCGTCAATATAACCATGTGGCAGCTCATTTTGGTAGTGCTGCTGCACAGAATGCTTGGACTACGGATAGCTTTGGTTCGGCTCATGCCCAGCTGCCGGCCCAGTTTTACACACAGAATGCGGCAGTTATGATGGGATCCTGGCGCAGTGCCTACGATCCAACTGGATTTCAGCGGTCGTCACCATATGAGAGTGCCATGGATTTTCAGTTTGGAGAGGGGCGCGAATGTGTCAACTGTGGGGCCATCTCAACACCACTCTGGCGACGGGACGGCACTGGTCACTATCTCTGCAATGCCTGTGGGCTGTATCATAAAATGAATGGCATGAATAGGCCGCTGATTAAGCCTAGCAAGCGCCTGGTGAGTGCAACAGCTACACGACGCCTTGGTCTATGCTGCACCAATTGTGGCACTCGCACCACTACTCTCTGGCGTCGTAATAATGATGGCGAACCAGTGTGCAATGCATGTGGACTGTATTACAAATTACATGGGGTCAATCGACCATTGGCAATGCGCAAGGATGGAATACAAACGCGAAAacgaaaacccaaaaaaacgGGCAGTGGCACTGCAGTAGGAGTTGGCGGGGGAACAGGTGCAGGTGGGAGCACAAATCTCGAGACCATTAAAGAGTGCAAAGAGGAGCATGACCTAAAGCCGTCACTCAGTCTAGAACGTCACGGGATCAACAAGTTGCACACAGATTTGAAAATGActcagcatcagcaacacgctcagcagcaacagcaacaccaacagcaaacgcatCAACAATGTTATTCCCATTACTCTCCGGTTACAGGGCAGAGCCAGACGACACAGctacaaacacaaaatcatCAAACACATGGACATGCTGGAACTAGTGGCCATCAAACGCAGCTAGGTTCAAGGCAATTACATACAACTGGCTCTCAACTATATACCCCCAGCGGCAGCAGTTCAGCCTCCGCCTATACGACACTTAGTAGTAATGCAACTGCTCCGGATACGCCCAGTTTGAGCAATGGAACGCCCTCGCCACActatcagcatcatcatcatcatcactcCCATCATCAGTCAGGCCATCCTGGCATGAGCGTAAGCGGAATGGGTGGGATGGGCGTAGGTGTGGGTGGAATGGCGCATCATTTGCatgcagctgcagctgcgGCTGCATACGGCGTGAAAACGGAAACAAATGCTAACAACTATGACTATGTGAACAATTGCTATTTTGGCGCATCATTTGGGGCATTAAGTGGTGCTGCAGCTGCCTCATCAGCAGCAATGGCTGGTGGAACAGCCAGCGATTTGGCCGGCTATCATCATCAGCACAACGTAATTCAGGCCGCCAAACTGATGGCTTCTTCTTAA
- Protein Sequence
- MYHSSAVAAAAYTDLAAAGSAAAVANAGVGVGIGPSGYHHQQAVNAPVYVPSNRQYNHVAAHFGSAAAQNAWTTDSFGSAHAQLPAQFYTQNAAVMMGSWRSAYDPTGFQRSSPYESAMDFQFGEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGMNRPLIKPSKRLVSATATRRLGLCCTNCGTRTTTLWRRNNDGEPVCNACGLYYKLHGVNRPLAMRKDGIQTRKRKPKKTGSGTAVGVGGGTGAGGSTNLETIKECKEEHDLKPSLSLERHGINKLHTDLKMTQHQQHAQQQQQHQQQTHQQCYSHYSPVTGQSQTTQLQTQNHQTHGHAGTSGHQTQLGSRQLHTTGSQLYTPSGSSSASAYTTLSSNATAPDTPSLSNGTPSPHYQHHHHHHSHHQSGHPGMSVSGMGGMGVGVGGMAHHLHAAAAAAAYGVKTETNANNYDYVNNCYFGASFGALSGAAAASSAAMAGGTASDLAGYHHQHNVIQAAKLMASS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00612475;
- 90% Identity
- iTF_00591361;
- 80% Identity
- -