Dema012588.1
Basic Information
- Insect
- Drosophila emarginata
- Gene Symbol
- grn
- Assembly
- GCA_037075365.1
- Location
- JBAMCD010000221.1:20872211-20917670[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.4e-19 8.9e-16 57.6 4.7 1 35 478 511 478 512 0.98 2 2 1.2e-18 3.1e-15 55.8 6.3 1 35 538 571 538 572 0.97
Sequence Information
- Coding Sequence
- ATGGATATGACCTCAACTGCGGAGGCTGCCGCACGCAGCTGGTACGATAGTCCGCGCTTAGGAGGAGGCGGCGGAGGCGGTGGATCGCCACATCAATCCAATGGCCTGGGCAGTGCTGGTAGCAGTCTAGCCCATAGCCATCACAGCCTGTCCAGCGGCGCCTCATCGGCGGGCAGCAGTGTGGGCGGCACTGGACTTGGAGGCGGTGCTGGTGGCGCCGGTTTGGGTCTGGATACCAGCGATATGAGTGCTTTCTATGCTTTGGAAAGCAATGGCCATCATCGCAGATATTATCCAAGCTATCATCAACACACATCCCGCATGCCCTCCTCACATGCCACGCCCCAAGTGTGCCGACCTCACTTTCATACACCGCTCAGTCCATGGCTAACCAGTGAGCATAAATCGTTTGCACCCGCCAGCGCCTGGAGCATGGGTCAATTTGCCTGCCCGCAGGAGCCGCAGGTGGAGCATAAATTGGGCCAGGTGGGCCAAAGTCATCAGACAACAGCGGCGGGCCAACATTCGTTTCCATTCCCACCGACACCGCCAAAGGATTCAACGCCAGATTCAGTACAAACCGGTCCATCGGAATATCAGGCGGTAATGAACGCCTTTATGCATCAACAGGCCACAGGCTCTACCTCACTATCAGACGCCAGTTGTGCACTGGACATAAAGCCCTCAATACAGAATGGAGGAGCAGGAGGCAGTTCCACATCCTCGGCCCACACATCCAGCGGACCCAATCAAACATCAACGCCAAAGCAACGCGAAGGTACGACAAATCAgaacaccaacaataacacTAGCTccaacaacaccagcagcagtaacaataACGCTGTtagccaacaacagcaacaccagcaacagcaacaacagcagcaaccaaaCACAAATAGCAATGCCTCCTCCGCCTCCGCATCCACCACCGCCTCAGCATCGGCAACCTCAAATGGCCTATTTGATGGGACGGCTCAGGCCCACTATGCGGCAAATAATGCTGGAAATGGCAGCGGGTATGACAGCAGCAGCTATGCCTCCTATCATCATGCGGCCGCACATCATCAGGCAGCTGTGGCAGCGGCAAATATGTTTCAAAGTTCCTCGGTGGCAGCGGCCGCTGTGCGGCATAGCATgggtgcagcagcagcagcggcagcccaagcccatcatcatcatcatcaccatcacaGCAGTCACAGTGGTAGCCATCATCAGTCCTCCTCCAATTCAAGTGGCATGCTTGGCATCGGTGGCAGTGGTAGCGTTGGCGGCGGTAGCAGCGGTATCGGTGGCCTTGGCGGCATGGCTGGCCTGGGCAGTTGCAATTCGGATGTTAAACCTGGTATTGGCAGTAGTGTTGCTGGTGGTCTAGATGTGAAACCTGTGCGAACGAAACCCCGGACAAGTGCTGAGGGTCGCGAGTGCGTGAATTGCGGTGCCACCTCAACGCCATTATGGCGACGTGATGGGACTGGCCACTATCTATGCAATGCCTGTGGATTATACTATAAAATGAATGGTCAGAATCGGCCACTGATTAAGCCAAAGCGAAGACTGACACTACAGTCATTGCAAAGTGCGGCAAAAAGGGCTGGCACATCCTGCGCCAATTGCAAAACCACAACCACAACCCTTTGGCGGCGAAATGCCAGCGGTGAACCAGTATGCAATGCCTGCGGATTGTACTACAAGCTGCATAATGTTAATCGTCCACTCACAATGAAAAAGGAGGGCATACAGACGCGTAATCGTAAACTTAGCTCAAaatcaaagaagaaaaagggtTTGGGTGGCGGTTGTCTGCCCATTGGTGGACATTTGGGTATGGGTGATTTTAAACCATTGGATCCATCAAAGGGTTTCGGTGGCGGCTTCTCAGCTTCAATGGCGCAACATGGACACCTTTCCAGTGGTCTGCATCCGGCGCATGCGCATATGCATGGCAGCTGGTATACCGGCGGCATGGGCGCTCTAGGCGCTTCGAGTGGTCTGCAAGGAGGCTTCTCCACAGCCGGCTCATTGAGTGGAGCAGTTGTCCCACACTCACAGCCCTATCACTTGGGTCTTGGTTCGATGAGATGCTGTAATTCCATGGCTGCAATGCCGATTGGCTTGACTCTGGGTCTAGTAACTAAAAAGCCAACCAGCCACCACGACGACaacgaagatgatgatgatgatgatgcggtTGATTTGGGCTTATCACGTTCACTGGAGACTGCCAGACGCTAA
- Protein Sequence
- MDMTSTAEAAARSWYDSPRLGGGGGGGGSPHQSNGLGSAGSSLAHSHHSLSSGASSAGSSVGGTGLGGGAGGAGLGLDTSDMSAFYALESNGHHRRYYPSYHQHTSRMPSSHATPQVCRPHFHTPLSPWLTSEHKSFAPASAWSMGQFACPQEPQVEHKLGQVGQSHQTTAAGQHSFPFPPTPPKDSTPDSVQTGPSEYQAVMNAFMHQQATGSTSLSDASCALDIKPSIQNGGAGGSSTSSAHTSSGPNQTSTPKQREGTTNQNTNNNTSSNNTSSSNNNAVSQQQQHQQQQQQQQPNTNSNASSASASTTASASATSNGLFDGTAQAHYAANNAGNGSGYDSSSYASYHHAAAHHQAAVAAANMFQSSSVAAAAVRHSMGAAAAAAAQAHHHHHHHHSSHSGSHHQSSSNSSGMLGIGGSGSVGGGSSGIGGLGGMAGLGSCNSDVKPGIGSSVAGGLDVKPVRTKPRTSAEGRECVNCGATSTPLWRRDGTGHYLCNACGLYYKMNGQNRPLIKPKRRLTLQSLQSAAKRAGTSCANCKTTTTTLWRRNASGEPVCNACGLYYKLHNVNRPLTMKKEGIQTRNRKLSSKSKKKKGLGGGCLPIGGHLGMGDFKPLDPSKGFGGGFSASMAQHGHLSSGLHPAHAHMHGSWYTGGMGALGASSGLQGGFSTAGSLSGAVVPHSQPYHLGLGSMRCCNSMAAMPIGLTLGLVTKKPTSHHDDNEDDDDDDAVDLGLSRSLETARR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00578179;
- 90% Identity
- iTF_00484101;
- 80% Identity
- -