Basic Information

Insect: Drosophila emarginata
Gene Symbol: lov
Assembly: GCA_037075365.1
Location: JBAMCD010000121.1:4392986-4402746[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 1.3e-18 2.5e-15 56.3 0.0 1 44 815 858 815 859 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	1.3e-18	2.5e-15	56.3	0.0	1	44	815	858	815	859	0.96

Sequence Information

Coding Sequence: ATGTTAAAGGACGTCGAAGAGCTGATTAAACGCCGCAAACTGACGTCGCTTCACATGAACGACTACGGCCGCCAGTTGCCgatgccgttgccgttgccgctgccgttgccgttgccactGCTGGCCAAGACGACgccaacgacaacgacaatgcCGGCCACGGAGCACCCATCCATGCATACAACACCGCCCACAACGCCGCCCACACCGCCACCATTGCCATTGAATATGTCAACGGCAACATCGGCGAGAACCCACAGTAGTCATAGTCCACCTGCCACTCCCACTGCTGCCCATAGTTCAACTGGAACAGCATCAGCGGCAGTAGCCTCGGATCATTATAGTCTGCGTTGGAATAACCATCAAAATCACATCCTGCGAGCCTTCGATGCTTTattgcaaacaaaaactttgGTTGATGTAACCTTAGTTTGCGCTGAAACATCGATTCGAGCCCATAAAATGGTTTTGTCCGCCTGTTCGCCGTTCTTTCAACGCGTCTTTGCAGAAACACCATGCAAGCATCCAGTTATAGTACTTAAGGACTTTCGTGGATGGGTAGTACAGGCCATTGTGGATTTTATGTACCGCGGTGAGATCAGTGTACCACAACAGCGTCTACAGACGCTTATACAAGCGGGAGAGTCACTGCAAGTTCGTGGACTTGTCGAAAGCTCAGTACCGGAGCATACACCTACGCCGGCCGCTTCTCCCGATGACTTTGCTCTAATGGATGCGTCACCGCTGCTATCATCCAGCTATGAGGATGAATCACCCTCCATGGTAAGGCCAAGTGGAGCAAGTAAACAACTTATAATGCCCTCGAGACTGTTTGGTAATCCGAATGCCGCTAGTGCAATGCAGGCAGCGGTAAGTCTTCGTCGAAAGCGGGATCAGGATTGTAGTGAACGCGAACCGGAAAGTGACCAGGAGCTGGGTGGTAGTTCACCCATGCCAAGGCGTAAGCAGGCACGACCACGCAGACGTTCCGGGGATATGCCACATGACTTTGCCCTGAACAAGCCAGATACGGAAACTGTGATCAAACATGAACTGCTCGAGAGAATGGAGCATGAGACTGGCCAAGAACCCGAGGAAGAGCATGATGATGCGGATGAGGAAGATGAGGAAAATCGGGATATTAAAGAGAGCCAGAGCGAGGAGACGCCTAGCCAAAAACCGCCCGAAGAAGTGGAGCAACCCGATCAATCAGATCATCAAGAGCTTGATGAGGAAGATTTGGATGAAGAGCCTGAAGATGAACAGGATGAAGAGGAACAGGATATCGAAGAGCTTATACATACCACAAACGAGTTGAGACGTCAAGCGGCGGTAGCTGCGGCAAATGCAGCTGCCATGTCGCGCTCACCATCGCCGTGTCCCAGTGATGGGCCGGAGGACCTTTGTACCACCAAGAAGGACAAGGATGGTGGCAATACAATTGCCGCCAATAGCATTTCGTCGGATAgtgaaacaaacaacaacaataacaataacaacagctgTAAACTTCAGGACAACAATCAACGCATAATGTTGTCCCTGAAGGACATCCGACAATTAAATGCCAAACCGAATTCCTCATCGTCTACTCCAAATCACAATCACAATCATGTCCAACCACCCACCAGCTGTTCATCAGGAGGCAATGGCCTACTGTCTTTTCCTCCGCCCGGTATGCGTCCACCAGGACTTCCAGATAGTCCGCCCTGCAATATGGAAGCGCTAGAGGCACAAATGCATGCTGCAGCCGCtgcagctgttgctgctgctggagcTGCCGGAGAGCATCCCTTTCATCATATGGAACATCAAATGGAAATGTCTTTagcggcagctgctgcagcagcagctatgCGAGATCCGCGCGAACCAAGAGATCCACATAATCCATTTTCCGGCAATCTACTGGGACCCATGGGCTTACCGCCCTTTGGACCTGGACCACATACGGGTGGCGGGCCAGGAGGAGGCGGTTCAGGCATTGGACCACCCGGTAGCGGTGGAGGTTGCCCGGGACAAGCACCACATGAACGCCTCGAGGAGAGCATGAATCGTCTGAGTAAAGAGTTTGGCAAGGAATTCAGCAAAGAGTTTGGTAAAGAATTTGGCAAGGAATTCGGCAAAGAGTTCGATCCCACATCGCCCATGAGTCTGCCTGGCCACTTTAATCCCCCCGATGGACCACATCCGCCATCACCGCTGCCCTTTCCCGGTATGTCATCGGCGTTGACGCTAACGCCGCCACATCACATGTTTGGCCTAGATTCACCACTGGGCCTTTTTCCACCTGGCATCGATCCCGGCAAGCTCTACAATCCACTCATGGAAATGAGCGATCCACGAGATATGCCTGGCGGTCCGCCGCCATTtctcaaaaagaaaaTGCCACGCCCAAAGGGACAACATTCAGCACCTCGAGGTGGTCCACCGCGTTCATGGACCAACACAGAGCTAACGGAGGCCCTGCAACATGTGTGGAATAAGAAAATGACCACGTCGCAAGCCTCCCGCATCTTTGGCATACCCTACAATTCGCTTCTGATGTATGTAAGAGGTAAATATGGCAAGAGCTTGAAGTTGGAACAATTGCGCAAGGACTGCATCAGTGGACCACCCATTGAGATGCTGCAGATGGGCATCAGTGGTGGCGGCGGAGGAGGTGGTTCGAGCAAGAGTGAAAAGCACAAGGAGCGTAAGGAGAAGGATAAGGATAAGAGTGGCGGCGGTGGAGGCGGAGGTTCTGGAGGTAGCTCTAGCAATAGCTCTGGCAGCTGCTCCAATAATCCAAGTGGTAATGGTTTGCCACCAATGCCGCATCCAAGTGAAATGGGTCCATTGGGTCCTTTGGATTTGGAACTCGGATTGCAATTGGGTCCGCCGGGTGGACCACGCAGTGGTAGCTCAGAACCCGATCTACTGGGTGGACCCAATCCCTTGTTCAATCCTTTTAATCCGCAAGGTTTCTATCCAGATTTTGCTGGTGGATTTCCAGGTTTGCCGCTTAGCATGTTAAATCTTTTACCGCCAGCGGAACGACAtcatgcagcagcagctatgCATCATTTGGGGGTGACTATGGATGAGGATTGCAAATCGGTGGGCTCTAAGCAATCCTCATATCTGGACGATGATTTTCCTGTGCCAGGCCAGGGATTGCCACTGCCGTTAACTGAACCGCGTAGATCGGGCGAGAATGGACCACAATTGACGCAGGCGAATGGTTCGGGTAATGGGCAGGATTGA
Protein Sequence: MLKDVEELIKRRKLTSLHMNDYGRQLPMPLPLPLPLPLPLLAKTTPTTTTMPATEHPSMHTTPPTTPPTPPPLPLNMSTATSARTHSSHSPPATPTAAHSSTGTASAAVASDHYSLRWNNHQNHILRAFDALLQTKTLVDVTLVCAETSIRAHKMVLSACSPFFQRVFAETPCKHPVIVLKDFRGWVVQAIVDFMYRGEISVPQQRLQTLIQAGESLQVRGLVESSVPEHTPTPAASPDDFALMDASPLLSSSYEDESPSMVRPSGASKQLIMPSRLFGNPNAASAMQAAVSLRRKRDQDCSEREPESDQELGGSSPMPRRKQARPRRRSGDMPHDFALNKPDTETVIKHELLERMEHETGQEPEEEHDDADEEDEENRDIKESQSEETPSQKPPEEVEQPDQSDHQELDEEDLDEEPEDEQDEEEQDIEELIHTTNELRRQAAVAAANAAAMSRSPSPCPSDGPEDLCTTKKDKDGGNTIAANSISSDSETNNNNNNNNSCKLQDNNQRIMLSLKDIRQLNAKPNSSSSTPNHNHNHVQPPTSCSSGGNGLLSFPPPGMRPPGLPDSPPCNMEALEAQMHAAAAAAVAAAGAAGEHPFHHMEHQMEMSLAAAAAAAAMRDPREPRDPHNPFSGNLLGPMGLPPFGPGPHTGGGPGGGGSGIGPPGSGGGCPGQAPHERLEESMNRLSKEFGKEFSKEFGKEFGKEFGKEFDPTSPMSLPGHFNPPDGPHPPSPLPFPGMSSALTLTPPHHMFGLDSPLGLFPPGIDPGKLYNPLMEMSDPRDMPGGPPPFLKKKMPRPKGQHSAPRGGPPRSWTNTELTEALQHVWNKKMTTSQASRIFGIPYNSLLMYVRGKYGKSLKLEQLRKDCISGPPIEMLQMGISGGGGGGGSSKSEKHKERKEKDKDKSGGGGGGGSGGSSSNSSGSCSNNPSGNGLPPMPHPSEMGPLGPLDLELGLQLGPPGGPRSGSSEPDLLGGPNPLFNPFNPQGFYPDFAGGFPGLPLSMLNLLPPAERHHAAAAMHHLGVTMDEDCKSVGSKQSSYLDDDFPVPGQGLPLPLTEPRRSGENGPQLTQANGSGNGQD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00555933;
90% Identity: iTF_00555933;
80% Identity: iTF_00501134;