Basic Information

Insect: Drosophila dives
Gene Symbol: salm
Assembly: GCA_035042365.1
Location: JAWNLJ010000357.1:971552-980298[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 2.3e-06 0.00016 21.9 1.7 1 23 363 385 363 385 0.98

2 8 3.2e-05 0.0023 18.3 3.5 1 23 391 413 391 413 0.98

3 8 2.2 1.6e+02 3.1 2.5 5 23 660 678 657 678 0.84

4 8 3.3e-08 2.3e-06 27.7 0.2 1 23 684 706 684 706 0.98

5 8 0.001 0.071 13.6 0.9 1 23 716 738 716 738 0.98

6 8 0.019 1.4 9.5 0.1 2 23 939 961 939 961 0.97

7 8 1.1e-05 0.00077 19.8 5.0 1 23 1108 1130 1108 1130 0.96

8 8 8.6e-08 6.1e-06 26.4 0.7 1 23 1136 1158 1136 1158 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	2.3e-06	0.00016	21.9	1.7	1	23	363	385	363	385	0.98
2	8	3.2e-05	0.0023	18.3	3.5	1	23	391	413	391	413	0.98
3	8	2.2	1.6e+02	3.1	2.5	5	23	660	678	657	678	0.84
4	8	3.3e-08	2.3e-06	27.7	0.2	1	23	684	706	684	706	0.98
5	8	0.001	0.071	13.6	0.9	1	23	716	738	716	738	0.98
6	8	0.019	1.4	9.5	0.1	2	23	939	961	939	961	0.97
7	8	1.1e-05	0.00077	19.8	5.0	1	23	1108	1130	1108	1130	0.96
8	8	8.6e-08	6.1e-06	26.4	0.7	1	23	1136	1158	1136	1158	0.98

Sequence Information

Coding Sequence: ATGTGTTCCATATTTCGCAATCGCATTAATTATCGGGGCACGGGCACGCGCAGTGGCGCCTCCAATggaggcggaggaggaggcggaggtagcagcagcagcagctcagatCCCACCAGCGAACGGGAGAGTCTCCTGGCCAAGGAACTAAATGCggacagcaataacaatgcgTCGGATGAGACAATCGAGCCGCAAATGGAGATGGAGTTGCAGCTGGAGAAGGAGAAGCAGTCGGCGGAGACAGCACTGCCCGGCGGCGGCGCCGATCAGCGAGATCCCGAGAACAGCAATGAGGCATTGGATCTGTCGGTCATCTCGGGCAATCGGTTGCCCAACAGCGGGCATGTGGCACTAGAAGCTTTACAACATACCAAAGTGGCGGTGGCCCAGTTTGCGGCCACGGCGCTGGCGGCGGCATCGACGGATCCCAGTGATCTGGCCATGGTCCAGTCGACCATCTTCAATGTGCAGCGACAGCATctgatgcagctgcagctcatCCAGCATCTACAGAGTCAATTGAAGCGGGCGGGGGGCGTGGTGGCCGCCCTCAGCCGGCAGGGTCAAAACTATGCCGAGCAggatgatgaggaggaggCGGCGGCCGAGGAGGCAGACGATGTGGAGGAgttggaggaggagcagcagatGTCGATGCCATCCAAAGAGCCGTCGCGAGTGAACGGGGAGCGAACCGAACTGGATCATGCAAGGCTGCAGGAGAGTTCAAAGACTGATGACGAGTGCAATAGGCTGGGGGAGAGATCAAGGCAGGAGAGATCAAGGCGGGAGACGACGAAGACGGCGGCAGAGACGGACGCCGAAGTGGAAGGCGAACACGAGCTGGCGGAGAGCGAGTACAAGCCACTGATGTGCGACATTAGCTCCAGTCTGGCGGCCAGCATCATCACCAATCATGATCCGCCGCCGGCGCCCAATGAGCCCAACTGCCTGGAGATGCTGCAACGACGCACCGAGGAGGTGCTGGACTCGGCATCGCAGAGCCTGCACGCCGCCCAGATGCAGGAGGAGTACTCGGAGTATGCCTCCAAGGAGGCGCAGAGTCGCGGCGAGATCTTCAAGCATCGCTGCAAATATTGTGGCAAAATCTTTGGCAGCTACTCGGCCCTCCAGATCCATTTGCGTTCGCACACCGGTGAGCGACCCTTCCACTGCAACGTTTGCGGCAGCAAGTTCACCACCAAGGGCAATCTCAAGGTGCACTATCAGCGGCACACACAGATCTTTCCGCCCATGCTGATGCCACCCGTGGTCAATGGGGTCAGTGCACCCGAGCAATTTGCTGCCATACGGCTGCCGTTTGTGGCACCACCTGGAGTGGCAGcagttggagcagcagcagcaccagcaccactgGCAGCAACACTACCAccacctccaccaccaccaccacccccgCCGCCAAGCAACGAACATCAAGAGGAGCCGGCAGCTGCGGCACGATTGCAGCAGGCCGAGGATCTGAGCAAGCCAGCAGCCAGAGAACTGTCGCAGTCGCCGGAGCAAGTCACACAAACCGCTCCGACAACCAAGTCACCACCTGCATTGGTCTCGCCAGAGAAGCAGGACCAGGACAAGCCGAAGGACAGTCCCAAGCCAACGACACCGCCAACGCCACCAGCTCCCTCGCCcacaactccaactccagcagCGAGCAATCGTCGCAATGGCAGCGTCCGCAAGCGGCAGACCAGCCAAGCGGGCAGTCCGCCTGGCGAGGAGCATCCCCATGCCGAACACCACTCGCACCTGGTGAAGTTGGTGCGTCGCTCATCGGCGAGCCGGGATGGGATGACGGCAATGCCTGGCGAGTATTCGCTGGCGCAGATGGAGCGTATTATTGACAAGTCGTGGGAGGATCTCATTGAGATCGACAAGACGTCGGAGACATctaagctgcagcagctggtcGATAATATTGAGAACAAGCTGACCGATCCCAATCAGTGCATCTTCTGCCAGAAAGTGATGTCCTGTCGCAGCTCCCTGCAGATGCACATACGCACCCATACCGGGGAGCGACCCTTCCGCTGCAAGATCTGCGGACGCGCCTTTGCCACCAAGGGCAACCTGAAGGCGCACATGAGCATCCACAAGATTAAGCCACCGATGCGCAGTCAGTTCAAGTGTCCCGTCTGCCATCAGAAGTTCTCCAACGGCATCATTCTGCAGCAGCACATACGCATCCACACCATGGACGAGGGCAGCGCTGGCCATgctcagctgcagctgcagcagggGCAGGGTGGGGATGTGGAACGCTTGGGCATCGAGGATCAGAACTCGAACAAGTCGTTGGGCACCTCGGACACGCTGGACTTCTCGACGACCGTCTCGGATCACTCGGGTCAGCGATCGGAGTCGTCGCAGGGTGGCGACTTTGACGAGTTCATGACCATGGACAGCACCGATGATTCGCGGGACAATTCCAGCGCGATGCTCGACAGACGCCTGCCTGGACACGAGGATGAGCGCTCCCGGTCGGATGATGTGGAGGGCAGCGGACGTGAGAGTGCCAGCGGTGAGATGCCCGCCATGGATCTATCATCGCCATCGCCAACGGCCACATCGCTGGCGCGTCTCTTTGCAGGCGGCGGCAACAGCGGCGGAGCAGCCGGCGTTGCCAGCTCAGGCGGCTTGCCCATGTTGCATGGCATGCCGATGCCACCGAATCTGCTGCTGATGGCCGCCGCCAGGGAGGAGATGCATGCGCTGGGCCAGACGCATGCCAAGTTTCCGCTGTTGCCCTTCGGACCGCTCGGATTAATGGGACTGCAGCCGCCCCCAAATGTGTGCAATCTGTGCTTCAAGATGCTGCCCAGCCTGGCCGCCCTCGAGACTCATCTGCAGACCGAACATGCCAAAGAAGTGACGGCTCCTTCCGTTCGAGCCCACTGCAATGATGCATTATCACCCTACGGTCCAAAGcttaCTCTCAATCCAAATCTGTTTGCCAAGAAGCCGAAGCCGGCCTCAACGTTGGAGCTGGCGCCTGCGGAACCAGTCACGCCATTGTCGGCACCCATTAAAGAGGAGCAGCCCGAATccgatcagcagcagcagctgcagcagcagcagccgcttcCCGATGAGGGCGGCTGCGATGCCCCAGCTGCCCCAACTCCCGCTGCTGCCACCACTGGCTATCAGCATGAGTCTGCCGCCGATGCGGAGCAGTCTCTAATGAAGATGCAGTTGCATGCACATCGCTTTCCAGCCGGTCCGCTGGACTTTCAGCAGGCACTGATGTCGGCGGGACCGCCCAGCTCTAGCCTGGATCCGCCGGTGAATAACAAGCACTTTTGCCATGTCTGCCGTCGCAATTTCAGTTCGAGCTCGGCTCTCCAGATTCATATGCGTACCCACACCGGAGATAAGCCGTTTCAGTGCAATGTGTGTCAGAAGGCCTTCACCACGAAGGGTAACCTTAAGGTTCACATGGGCACCCATATGTGGACGAATCCGACATCGCGTCGCGGCCGTCGCATGTCCCTGGAGTTGCCGATGCGACCGGGACCTGGTCCGGGCCCCGGCCCAGGTGCCCCACATGGTGTCCCAACCGCTGAGCAGGAGTTCATGCAGCGTCGCCCCGAACTGTTCTTCCCATATTTGCCACCCTTCTTCAACGGAATGCCACCCAAGCCTGGGGAATTGAGTCCTGGCGCTTTTGCCAACATTCCTCCACCGCATTTTGCCAATGGAGCCAAGTATCCATATCCACCGGGTCTGCTCAGCTTTCCCGGCTTTCTAGGTGCTGGCGGTGCGCATCCCCAGCATCCCTATGCCGGCATGGAGCGTGGCAACAGCAAGTCACCCACATCGGAGCCGGCACAGAGTCCTGCTTCGCGTGAGGATGACTCCGCTCTGGGCAATAATATTTGGCATCCGCTGAGCAGCATTAAAATGGAGAGCAATCATCACGAAAGCGCTGGCAATCAGAgcgagcaggagcaggaaccggaacaggagcaggaacaCGAGGATAACAAGAGCGTGGGCATCGATGAGCCTGAGGCGGAAGCTGAGGATTCAGCTGAGAAgtag
Protein Sequence: MCSIFRNRINYRGTGTRSGASNGGGGGGGGSSSSSSDPTSERESLLAKELNADSNNNASDETIEPQMEMELQLEKEKQSAETALPGGGADQRDPENSNEALDLSVISGNRLPNSGHVALEALQHTKVAVAQFAATALAAASTDPSDLAMVQSTIFNVQRQHLMQLQLIQHLQSQLKRAGGVVAALSRQGQNYAEQDDEEEAAAEEADDVEELEEEQQMSMPSKEPSRVNGERTELDHARLQESSKTDDECNRLGERSRQERSRRETTKTAAETDAEVEGEHELAESEYKPLMCDISSSLAASIITNHDPPPAPNEPNCLEMLQRRTEEVLDSASQSLHAAQMQEEYSEYASKEAQSRGEIFKHRCKYCGKIFGSYSALQIHLRSHTGERPFHCNVCGSKFTTKGNLKVHYQRHTQIFPPMLMPPVVNGVSAPEQFAAIRLPFVAPPGVAAVGAAAAPAPLAATLPPPPPPPPPPPPSNEHQEEPAAAARLQQAEDLSKPAARELSQSPEQVTQTAPTTKSPPALVSPEKQDQDKPKDSPKPTTPPTPPAPSPTTPTPAASNRRNGSVRKRQTSQAGSPPGEEHPHAEHHSHLVKLVRRSSASRDGMTAMPGEYSLAQMERIIDKSWEDLIEIDKTSETSKLQQLVDNIENKLTDPNQCIFCQKVMSCRSSLQMHIRTHTGERPFRCKICGRAFATKGNLKAHMSIHKIKPPMRSQFKCPVCHQKFSNGIILQQHIRIHTMDEGSAGHAQLQLQQGQGGDVERLGIEDQNSNKSLGTSDTLDFSTTVSDHSGQRSESSQGGDFDEFMTMDSTDDSRDNSSAMLDRRLPGHEDERSRSDDVEGSGRESASGEMPAMDLSSPSPTATSLARLFAGGGNSGGAAGVASSGGLPMLHGMPMPPNLLLMAAAREEMHALGQTHAKFPLLPFGPLGLMGLQPPPNVCNLCFKMLPSLAALETHLQTEHAKEVTAPSVRAHCNDALSPYGPKLTLNPNLFAKKPKPASTLELAPAEPVTPLSAPIKEEQPESDQQQQLQQQQPLPDEGGCDAPAAPTPAAATTGYQHESAADAEQSLMKMQLHAHRFPAGPLDFQQALMSAGPPSSSLDPPVNNKHFCHVCRRNFSSSSALQIHMRTHTGDKPFQCNVCQKAFTTKGNLKVHMGTHMWTNPTSRRGRRMSLELPMRPGPGPGPGPGAPHGVPTAEQEFMQRRPELFFPYLPPFFNGMPPKPGELSPGAFANIPPPHFANGAKYPYPPGLLSFPGFLGAGGAHPQHPYAGMERGNSKSPTSEPAQSPASREDDSALGNNIWHPLSSIKMESNHHESAGNQSEQEQEPEQEQEHEDNKSVGIDEPEAEAEDSAEK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00525326;
90% Identity: iTF_00535491;
80% Identity: -