Basic Information

Gene Symbol
kn
Assembly
GCA_035042365.1
Location
JAWNLJ010000437.1:1100587-1116291[-]

Transcription Factor Domain

TF Family
COE
Domain
COE domain
PFAM
AnimalTFDB
TF Group
Helix-turn-helix
Description
This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.4e-88 4.2e-85 286.2 0.4 42 182 125 265 92 265 0.95

Sequence Information

Coding Sequence
ATGTTCGCGCCAAGAAGAAGTGCGCGTGTGGCCGAAATAGAAAATGCGACTTCGAATCAAGCAACTACAACGAGTGTGAATGCGAGTGTGAATGCGAGTGTGAATGCGAGTGTGAATACGAGTGTGAGTGCAAAAATGACAGCGGGCTTTCATTCAGTGCATTTGGCGACGGCAAatcaccatcagcagcaacaacaacaacagcaacaacaacaacaacaacagcaacaacaatcaaacaaTCAAGGACataatcaaacaaacaatcatcttcataatcatcatcagcatttgCAGCAGGAGGAAAATCTAAATCTCAATCGGGATCATAATCACAatcataatacaaataataaaataatgcgcTGTGATTTGAgTTTGGGCATTGGCCGCGCCCACTTTGAGAAGCAGCCGCCCAGCAATTTGAGGAAGTcaaatttctttcattttgtgATTGCGCTCTACGATCGGTCGGGACAACCCATCGAGATCGAGAGGACGGCCTTCATTGGATTCATCGAGAAGGATTCGGAGTCGGATTCAACAAAGACAAACAATGGCATCCAGTACAGATTGCAATTACTCTACGCCAATGGCGCCCGACAGGAGCAGGACATATTTGTCAGACTCATCGATTCGGTAACCAAAGCGGCCATCATCTACGAGGGCCAGGACAAGAATCCCGAGATGTGCCGCGTCCTGTTGACGCACGAGGTGATGTGCAGCCGCTGCTGTGATAAGAAGAGCTGTGGAAACCGCAACGAGACGCCCTCGGACCCCGTCATCATTGATCGGTAA
Protein Sequence
MFAPRRSARVAEIENATSNQATTTSVNASVNASVNASVNTSVSAKMTAGFHSVHLATANHHQQQQQQQQQQQQQQQQQSNNQGHNQTNNHLHNHHQHLQQEENLNLNRDHNHNHNTNNKIMRCDLSLGIGRAHFEKQPPSNLRKSNFFHFVIALYDRSGQPIEIERTAFIGFIEKDSESDSTKTNNGIQYRLQLLYANGARQEQDIFVRLIDSVTKAAIIYEGQDKNPEMCRVLLTHEVMCSRCCDKKSCGNRNETPSDPVIIDR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00499375;
90% Identity
iTF_00552094;
80% Identity
-