Basic Information

Gene Symbol
kn
Assembly
GCA_035042365.1
Location
JAWNLJ010000437.1:1084914-1087360[-]

Transcription Factor Domain

TF Family
COE
Domain
COE domain
PFAM
AnimalTFDB
TF Group
Helix-turn-helix
Description
This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 3.2e-119 9.3e-116 387.4 0.0 205 384 1 209 1 213 0.99
2 2 1.6e-06 0.0048 15.2 15.0 424 505 216 308 209 337 0.58

Sequence Information

Coding Sequence
ATGAGAAGATTTCAGGTTGTCATCTCCACCCAAGTGGCCGTTGATGGACCACTGCTGGCCATCTCGGATAATATGTTTGTGCACAATAATTCCAAGCATGGCAGACGCGCTAAGCGATTGGACACAACGGAAGGTACAGGCAACACATCCCTGTCCATTTCCGGTCACCCCCTAGCGCCCGACAGTACCTACGATGGCCTCTACCCACCGCTGCCCGTGGCCACGCCCTGTATTAAGGCGATATCGCCCAGCGAGGGCTGGACAACAGGTGGCGCCACCGTTATCATTGTGGGCGATAACTTCTTCGATGGTTTGCAGGTGGTCTTCGGCACCATGCTGGTGTGGAGCGAGCTAATCACATCACATGCGATACGCGTCCAAACACCACCCAGACACATCCCCGGCGTGGTCGAGGTGACGCTCTCCTACAAGAGCAAACAGTTCTGCAAAGGATCACCCGGTCGCTTTGTCTATGTCTCAGCACTCAACGAACCCACAATCGACTATGGCTTCCAGCGCCTGCAGAAGCTCATCCCACGGCATCCCGGCGATCCCGAGAAACTGCAAAAGGAGATCATACTCAAACGGGCCGCAGATCTGGTTGAGGCTCTCTACTCCATGCCCAGCAGATCACCCGGTGGCTCCACTAGCTTCAATTCGTATGCGGGTCAGCTGGCGGTGAGCGTACAGGATGGCTCCGGCCAGTGGACAGAGGATGACTATCAGCGCGCCCAATCGAGCAGTGTCAGTCCACGTGGCGGCTACTGCAGCAGCGCCTCAACGCCCCACAGTTCCGGTGGCTCCTACGGGGCAACAGCGACCACCGCCAGCGTGGCAGGCACTGCGAATGGCTATGCGCCTGCCCCCAACATGGGTACGCTCTCCTCCTCGCCCGGCAGCGTCTTCAACTCCACATCAATGTCCATGACGACGCCTTGGCATTCAGCGCTCGTGCAGCATCATCATGTCGCCGCCGCCAACACTCACCCGCATCACTATGCGCATCCGCATCAGCCATGGCACAATCCTGCCGTTacagcagcgacagcggcCGCAGTTTAA
Protein Sequence
MRRFQVVISTQVAVDGPLLAISDNMFVHNNSKHGRRAKRLDTTEGTGNTSLSISGHPLAPDSTYDGLYPPLPVATPCIKAISPSEGWTTGGATVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGSPGRFVYVSALNEPTIDYGFQRLQKLIPRHPGDPEKLQKEIILKRAADLVEALYSMPSRSPGGSTSFNSYAGQLAVSVQDGSGQWTEDDYQRAQSSSVSPRGGYCSSASTPHSSGGSYGATATTASVAGTANGYAPAPNMGTLSSSPGSVFNSTSMSMTTPWHSALVQHHHVAAANTHPHHYAHPHQPWHNPAVTAATAAAV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00521135;
90% Identity
iTF_01549315;
80% Identity
iTF_00500041;