Ddif005671.1
Basic Information
- Insect
- Drosophila differens
- Gene Symbol
- NFX1
- Assembly
- GCA_037043665.1
- Location
- JBAMAZ010000209.1:20689-22097[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 9 0.0059 34 4.5 2.0 13 19 150 156 149 156 0.90 2 9 3 1.7e+04 -4.3 1.6 5 10 216 221 216 221 0.87 3 9 0.0042 25 5.0 4.1 1 12 227 238 227 238 0.94 4 9 0.23 1.3e+03 -0.6 0.3 4 10 248 254 247 254 0.92 5 9 1.1e-07 0.00062 19.7 13.5 1 19 260 277 260 277 0.99 6 9 3 1.7e+04 -4.6 3.7 10 15 306 310 305 318 0.56 7 9 0.00037 2.2 8.4 11.3 10 19 326 335 324 335 0.94 8 9 6.6e-07 0.0039 17.2 11.4 1 15 370 383 370 389 0.91 9 9 0.17 9.8e+02 -0.1 1.5 1 6 399 403 399 405 0.91
Sequence Information
- Coding Sequence
- ATGTTATTGTTACGTGCCCCTCGTGCCGTGCGGAACAGACGTTATCCTGTACCTGTTCTGCAGTCGCGTGAGTACGCCACCTTTCGACATTTTCCTGATTCCGCACAGCTGCGGCAACAGTTGTGGTCGCGTGCAGCCTCCCTGTCCGCACCCCCGCCCCCTCCAGTGCCACCCCGGCCCGTGTGCGTGCACCAAGATCATCGGACCGAAGAGCTGCCCTTGTGGACGCAGCAGCTACTCACTACCGTTGCGGCCAGGAGGATCCAAAGACGTGCGGTGGGGTGTGCGACCGACTGCTTGCCTGCGGAGTGCATCGGTGTGAGGACGCGTGTCACGTGGGCAGCTGCAAGCGTTGTACTGTTGAGGTCGATTCAGCAGCATGTGCTTGCCGCAAGTCTCACAAGAAGGGAACCTGTGGGGACGCCCTTGGCACTGCGACGAACCCTAGGTGAGTGCCCACCTTGCAAACGCGACCCATCTGTCGTTTCACGCTGTCCGTGTGGCGCACAGGCCCTCTCCGAAGAACGAGCCAGCTGCCTGGATCCTATTCCCTCCTGCGGCCGTGTCCGTGGCATGACGCTGGACTGCCTCACCCACACCCTGCACGCTGCCGTGTCACGATGGACCCTCGAGAAAGACACGTGGAAGTGCACTAGACGATGTGCGGCGAAGCTATCGTGCAGTCGTCACTACTGTACGGTGCTGTGCTGCCCTGACCGTCGGAATCCGCTCGCCGCGGTCCACATCTGTGATGCCGTGTGTCTGCGGCCGCACAGCTGCGGCCACCGGTGCTTGGAACCGTGTCACGCAGGGGCGTGCCGATCCTGCCCCAACGTAACAACGGAGCGACTGTACTGCAACTGCGGTGCGACAATGCTTATGCCGCCACAACCCTGCGGGACGGTTGCCCCAGACTGCCACGAGCCGTGCAAAATTCCCCGCCCTTGCGGCCACGCGCCGACTGACGGTCATCGGTGCCACTTGGGTCCGTGCCCGCCGTGCCCCGTTACGGTaatgagagtgtgtgtggggggtcATGAGGAGGTGGAGACCATCTGCGGGGAGCCGCGGCCCACCTGCACTACGGGCTGTGGGAAGCTCCTGCAGTGTGGGCACACCTGTCCTAGGCCGTGCCACGATGGAGAGTGCGTCGTCAATGCCTGCAGCACAGCATGTGGTCGGGTGCATGAAGCGTGCGGTCACAGTTGCCGTGTCATGCCACTGGCCTGGACAACGTGCCCCCGTGCGCATTTCGGTAGAGCAGACATGCATGTGCGGTCGCCGTAG
- Protein Sequence
- MLLLRAPRAVRNRRYPVPVLQSREYATFRHFPDSAQLRQQLWSRAASLSAPPPPPVPPRPVCVHQDHRTEELPLWTQQLLTTVAARRIQRRAVGCATDCLPAECIGVRTRVTWAAASVVLLRSIQQHVLAASLTRREPVGTPLALRRTLGECPPCKRDPSVVSRCPCGAQALSEERASCLDPIPSCGRVRGMTLDCLTHTLHAAVSRWTLEKDTWKCTRRCAAKLSCSRHYCTVLCCPDRRNPLAAVHICDAVCLRPHSCGHRCLEPCHAGACRSCPNVTTERLYCNCGATMLMPPQPCGTVAPDCHEPCKIPRPCGHAPTDGHRCHLGPCPPCPVTVMRVCVGGHEEVETICGEPRPTCTTGCGKLLQCGHTCPRPCHDGECVVNACSTACGRVHEACGHSCRVMPLAWTTCPRAHFGRADMHVRSP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -