Basic Information

Insect: Drosophila differens
Gene Symbol: -
Assembly: GCA_037043665.1
Location: JBAMAZ010000007.1:433536-436307[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 3.2 2.1e+02 2.7 2.6 2 23 334 356 333 356 0.95

2 9 0.0059 0.38 11.3 0.5 3 23 414 435 412 435 0.94

3 9 0.00015 0.0099 16.3 0.2 1 21 479 499 479 500 0.96

4 9 0.57 37 5.0 3.5 3 23 509 530 507 530 0.94

5 9 3.3e-05 0.0021 18.4 1.8 1 23 536 558 536 558 0.98

6 9 0.0044 0.29 11.7 0.5 1 23 563 586 563 586 0.96

7 9 0.12 7.9 7.1 0.6 2 23 594 616 593 616 0.95

8 9 0.58 38 5.0 1.2 2 23 623 644 622 644 0.94

9 9 0.0015 0.1 13.1 1.5 1 23 649 672 649 672 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	3.2	2.1e+02	2.7	2.6	2	23	334	356	333	356	0.95
2	9	0.0059	0.38	11.3	0.5	3	23	414	435	412	435	0.94
3	9	0.00015	0.0099	16.3	0.2	1	21	479	499	479	500	0.96
4	9	0.57	37	5.0	3.5	3	23	509	530	507	530	0.94
5	9	3.3e-05	0.0021	18.4	1.8	1	23	536	558	536	558	0.98
6	9	0.0044	0.29	11.7	0.5	1	23	563	586	563	586	0.96
7	9	0.12	7.9	7.1	0.6	2	23	594	616	593	616	0.95
8	9	0.58	38	5.0	1.2	2	23	623	644	622	644	0.94
9	9	0.0015	0.1	13.1	1.5	1	23	649	672	649	672	0.97

Sequence Information

Coding Sequence: ATGGCCGCCGCAGCGGATGCTGCAAAATCGAACGCGTTGCTCGCGACGAACAAAggcaataatacaaaatgccGCGCTTGCCTCGCCGTCGGTCGCCAAACGGTCAAACTGGATGCCAAAATACCGGAACTGAAGACCGTGCGCACCTACGGCCAGGGATTGCGCCAGTGCACGAATATACCGTTAACCGCTCGCTCCGCCGGCGGCTACAGGTGGCCCATGCAGATCTGTTTGCGCTGCTGTCGTGCCCTCGAGGTGACCATGCATTTTGTGGAACTGACACTGGAATCCAATCGGAAATTGTTTGCCGAATCGCAAAATCTCAAgtcgatgacgacgacgacgatgacaatGACGAGTGCTTCGGGTGAGCTGAAGCGCAAGGCGAGTGGTAGCAGTGAGCTGTTGCATTGGAATCAATTCAGTCAGGAGTTTGAGCAATTTGTGGAGAGTTACGATGGGATCACAGCGCCCATCGAGGAGAACGTGCTGTACATGCGGGGTGCCAAGGTGCCACGCCTCGATGCGGACATAGCGCCCAACAGGCAGCCACCCGAGGAGGATGATGTCATCTTATTTGATGTAAAGTATGAGAGCAATGATCAGGATCAGGAGGATGAGAACGATGGCTCCGATGCGAAGAATAGCGAAACCTTCTATGACACTAGTATTATGAATGAGAGCAACCAATCCGCCGCAACTGGCATTAAAAGCAGCgccgagaacaacaacaattataattttaataacaagAATGGGGATGTGGAGGGCGATCTCATCCAGCGTGCCCTCTTCATGACTCTCAACGATgatgccaacagcagcagcagccaaacaacaacgcATGATTTACAATCCATTGAGTCCATCAAAGCcacattattaaaatCTacggaggagcagcagctggcagggACAAGTGGCAGCAGCTTGAGGAGCATTTTGACTAGCAAATCAAATCAGCCCAGCAGGGAGATCAATGTCCAGATACCGTTGCTCAGCTGCAGCATGTGCAAACAGACGCACACGGAGGCCAAACAGATGAGGACACACTATATGCGTGCCCACAGCTGTGATGTGCCCGAGGATGATATCATTGGCCTGACCAAAAatcAAAGCTTTAAGTGTCGTCCATGCAATGATTATGTGACAAACAGTCGCACGGATATGCAACAGCATCTGATTGAACACCACAAAATCGATGGGGATTTTGAAATGTATTGTTATGTGCAGCAGAATTGTCCCGCCTGTGGGCGCATCTTCAAGGATCAGCGCTCGGCACGCACACACTacacacgcatgcacacaccacaacagcaacaacaacagcaacaacaacagcagcaacaacagcagcagcagcagcttcagcaacaacaaccgcaacagttgcagccacAATCTGGCAATTCAgttgagcagcagccgcaacaattTGTGTGTACCGCCTGCGATAAGGTATTCAATTTAAAGGGCAGCCTGCAGGCGCATCAACGTTTCTGCCAGGTGAAGCAGCCGGTGCACTGCACCTTCTGCAAGCAGCAGTTTAGCAGCATGCGCAAATACgagttgcacttgcaacagcagcacgcTGTGGACACGTTGCACGAATGCGAGATATGCCTGAAGAATTTCAAGAATAGCGATTCGCTGGCAGTGCATCGCAAGCGGCACTCAGAGCGACATTTTCACTGTGACAAGTGTTCGCTGAACTACATCAATGCGGCGGAGTTGCGGGTGCACTACGAGCGTGCCCATGTCCACGAGGAGCAGGTGGTCACCTGTCGCAGCTGTGACAGCACATTTCAGAATTACGCCCTGCTTCGCGAACACGAACAGCGCTCGCATCAAAAACTCAAGATTTGGCGCTGCGACAGTTGCAGTTTCGAGACGAAATCGCGTGCTCGACTGCGTCAACATCAGTACGAACACATGGACTATCCGTACAAGTGCCAGCACTGTCCCGAGGAGTTTGCCGATCGCGGCAAAATTCGTCAACATTCCAAGAAGGTGCACTCGGTGGAGCTGAGCGATGAGCAGCTGGCGGATATGTTTCGGGAACGCATCGGCTACACCAATCGCCATGATGCATTCAGCAAGACAAACACCTCCCTGGAGATACCCGGTTTCAGTGATGATTGCTTTACGGAGCTGAAGAGTCTGGGCCTAGACTATGATGATATAACAACCGATCTCTTCTCGAATTCCATTAGTGCACTGGACACTCTGCTCGAATTGGTACCCTGA
Protein Sequence: MAAAADAAKSNALLATNKGNNTKCRACLAVGRQTVKLDAKIPELKTVRTYGQGLRQCTNIPLTARSAGGYRWPMQICLRCCRALEVTMHFVELTLESNRKLFAESQNLKSMTTTTMTMTSASGELKRKASGSSELLHWNQFSQEFEQFVESYDGITAPIEENVLYMRGAKVPRLDADIAPNRQPPEEDDVILFDVKYESNDQDQEDENDGSDAKNSETFYDTSIMNESNQSAATGIKSSAENNNNYNFNNKNGDVEGDLIQRALFMTLNDDANSSSSQTTTHDLQSIESIKATLLKSTEEQQLAGTSGSSLRSILTSKSNQPSREINVQIPLLSCSMCKQTHTEAKQMRTHYMRAHSCDVPEDDIIGLTKNQSFKCRPCNDYVTNSRTDMQQHLIEHHKIDGDFEMYCYVQQNCPACGRIFKDQRSARTHYTRMHTPQQQQQQQQQQQQQQQQQQLQQQQPQQLQPQSGNSVEQQPQQFVCTACDKVFNLKGSLQAHQRFCQVKQPVHCTFCKQQFSSMRKYELHLQQQHAVDTLHECEICLKNFKNSDSLAVHRKRHSERHFHCDKCSLNYINAAELRVHYERAHVHEEQVVTCRSCDSTFQNYALLREHEQRSHQKLKIWRCDSCSFETKSRARLRQHQYEHMDYPYKCQHCPEEFADRGKIRQHSKKVHSVELSDEQLADMFRERIGYTNRHDAFSKTNTSLEIPGFSDDCFTELKSLGLDYDDITTDLFSNSISALDTLLELVP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00560615;
90% Identity: iTF_00525464;
80% Identity: -