Basic Information

Insect: Drosophila differens
Gene Symbol: salm
Assembly: GCA_037043665.1
Location: JBAMAZ010000286.1:290069-301286[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 5.1e-06 0.00033 20.9 0.9 1 23 503 525 503 525 0.98

2 7 1e-05 0.00065 20.0 2.1 1 23 531 553 531 553 0.98

3 7 0.017 1.1 9.8 1.5 2 23 928 949 927 949 0.98

4 7 7.2e-08 4.7e-06 26.7 0.5 1 23 955 977 955 977 0.98

5 7 0.00022 0.014 15.8 2.3 1 23 987 1009 987 1009 0.98

6 7 0.029 1.9 9.1 2.9 2 23 1433 1454 1432 1454 0.97

7 7 2.8e-08 1.8e-06 28.0 1.3 1 23 1460 1482 1460 1482 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	5.1e-06	0.00033	20.9	0.9	1	23	503	525	503	525	0.98
2	7	1e-05	0.00065	20.0	2.1	1	23	531	553	531	553	0.98
3	7	0.017	1.1	9.8	1.5	2	23	928	949	927	949	0.98
4	7	7.2e-08	4.7e-06	26.7	0.5	1	23	955	977	955	977	0.98
5	7	0.00022	0.014	15.8	2.3	1	23	987	1009	987	1009	0.98
6	7	0.029	1.9	9.1	2.9	2	23	1433	1454	1432	1454	0.97
7	7	2.8e-08	1.8e-06	28.0	1.3	1	23	1460	1482	1460	1482	0.99

Sequence Information

Coding Sequence: ATGAAAAATCACTTGCAAAACGTTCTGTGTGCAATGCGTAGTGACTTCAAGGATAATCACCAGGagaccataaataaaatgatacaATTTGGTACCGTTAAATATGGCATTGTCAAACAGCTGAAGGATCGCGCCAGAAGCGCCGAGAAAGACATCGCAAGTGATCAGGAAGATAATGGCGCCTGCTCGCCGCTGACAACGGCGACACCGGCCAGCGCCAGTGCTGGGAATAGTCCCTGCCCCAGCCGCAGTCCGCGGCGccacagcgacgacgacgacgaggtgGCTGGCGAAGGGGAGCTGCTACAAGTGGCAGACAGCAAAGAGGATAAACAGGATAAGCCGGACAAGCTCAAGGAGAGCGTGGAGCAAATTGAGCATCGAACAGATGCGATCGTCGAGGatcacaatcacaacaacagcagcaaccacaacaacaacaacgatagcgataacgataacgataacgataacgttgccgataacgataacaacaaagcCAAGGCCATGACAAAGCCGCCCGAGGAACACGAGACGAACGCGAACGCGAACTCAAACTCATCTCTGCCCAATTCACCCACCGCTGCCACGTCCAGCATGGAGGCGCCACAGAAGCAACTGGATGTGGACGTTGAGATGCCGCAGGCGGAGCACGAGAAGAGTCCAGCGACGCCGCCGGTCagcaatgcaacagcagcagcagcaacagcagcagcagctgcagcggcagcagcccaACAATTTGGGGCAACACCGGTCACGCTGGAGGCGATACAAAACATGCAGATGGCAATCGCCCAGTTTGCGGCCAAGACAATTGCGAATGGCGCCTCCGGAGCGGACAACGAGGCGGCCATGAAGCAGCTGGCCTTCCTCCAGCAGACGCTGTTcaatctgcagcagcagcaactgtttcAGATTCAGCTCATCCAGCAGCTGCAATCGCAGCTGGCCCTCAATCAGGCCAAGCAGAGCAACGAGGACGACGCCGACGAGGATGTGGAGCCCGAGGAGCGGGAGGATGGCGAGACGGATACctacgaggaggaggagcgcaTTGCCGACATGGAGTTGAGGCTGAAGGCCGAGGCTCGCATGGCCGAGTCCAAGGCACGCCAGCATCTCATCAATGCGGGCGTTCCGCTACGTGAACGTTCCCCCTCGCCGGCTGTCTCCCTGAAGCGCAAGCGGGGCGAAGACGCCGGCGCCAAGTCTGTTGGTGGTGCCAAGGCCTTTGGCCAGCCGCCGGAGAGCGCCCAGGATGCGCTGTCCAAGCTCAAGGAGATGGAGAATATGCCGCTGCCCTTTGGCACTGATCTGGCCTCCAGCATCATAACGAATCACGATGATCTGCCCGAGCCGAACTCCCTGGATCTGCTGCAGAAGCGGGCACAGGAGGTGCTCGACTCGGCCTCGCAGGGCATCCTGGCCAACAACATGGCCGATGACTTTGCGTTCGGGGACAAGTGCGGCGAGGGCAAGGGTCGCAACGAGCCCTTCTTCAAGCACCGCTGCCGGTACTGCGGCAAGGTCTTCGGCTCCGATTCGGCGCTACAGATCCACATCCGATCTCACACGGGCGAGCGACCCTTCAAGTGCAACGTCTGCGGCAGCCGGTTCACCACCAAGGGCAACCTGAAGGTGCACTTCCAGCGGCATGCCCAGAAGTTTCCGCACGTGCCGATGAATGCGACACCGATACCCGAGCACATGGACAAGTTCCATCCGCCGCTGTTGGATCAAATGTCCCCGGACAGTTCGCCCACACAATCGCCAGCGCCGGCATCCGGCCAGGCGTCGGCCAGCTCAACGTCCGCCCATCCGCCAGCGATGTCTTTTCCCGGCCTGCAGGGCCTCTACCGTCCGCCCATGGAGCTGCTGAAGTCCCTCGGAGCGGCGGCTGGCAGTACGGCCGGACTGCCGCATCCCTTCTTCCCCCAGATGCCGGGGCTGGGTGCGGCTCTCAAgcacagccaacagcagcaggttAGTCAGGAAATGCCTACAGATTTGCGAAAATCCTCTGGTCCCAGTTCACCCCACGACGAGgaggacgacgatgatgacgatgatatGACTGCTGTGCGGCTGCCTGTCAAAGCGGAACTGCTCGAGGAGGAGAAGACGGAGCCGGAGACGGCAGCAACGTCCGCCGAGTGTGCCGACATGgaaccagagccagagccactGCCGCTGGAGGTGCGCATAAAAGAGGAACGCGTCGATGAGAttgaggagcaggaggaggagcagcagcagcagcgggagcgggagcagcagcaggaaaccCCTGCCAATCGCACGCCGACAGCCTCGCCGAAGAACCCAcagcatcatcatcaccaccaTCATCCCgcccagcagcaccaccataTGGCCGGCTATCCACCGGTGGTGCAACCGATTCAACCACCAGCAATAATGCACGCCCAGTGCTCGCCCGGCTCGCATTCGCATCTGGACCAGCTGCCGACACCGGGCCAGCTGCCGCCAACGATGCCCCATCGCGAGGACTTCTTCGCCGAACGATTCCCCCTCAATTTCACCACAAAGACCCTCTCCCCCGAGCACCACTCGCCGATCCGCTCGCCGGCTGGCCACGCTCACGCCCACATTCCGCGCTCGCCCTTCTTCAATCCGATCAAGCATGAGATGGCGGCGctgttgccacgcccacacagcAACGACAACTCGTGGGAGAACTTCATCGAGGTGTCGAACACGTCGGAGACGATGAAGCTCAAGGAGCTGATGAAGAACAAGAAGATCAGCGATCCCAATCAGTGTGTCGTCTGCGATCGCGTCCTCTCCTGCAAGAGTGCCCTGCAGATGCACTACCGCACCCATACCGGCGAGAGGCCCTTCAAGTGTCGGATCTGCGGACGCGCCTTCACCACCAAGGGTAACCTGAAGACGCACATGGCTGTGCACAAGATTCGTCCGCCGATGCGCAACTTCCATCAGTGTCCCGTCTGCCACAAGAAGTACTCGAATGCGCTGGTCCTCCAGCAGCACATCCGGCTGCACACGGGCGAGCCGACGGATCTGACGCCCGAGCAGATTCAGGCGGCCGAGATTCGTGATCCGCCGCCCTCAATGATGCCCAGCCACTTTATGAATCCCTTCGCAGCGGCTGCCTTTCACTTTGGTGCCATGCCCGGCGGTGGTCCGGGCAGTCATAATCCGGGTGCGGGTGCGGGTGCGGCTGGCATGTCGGGCGTTCCGCACAATGGCGCCCTGGGTTCGGAGTCGTCGCAGGGTGATCTGGACGACAACATGGACtgtggcgatggcgatggcgatgattTCGACGACGCCTCCTCGGACCATCTCTCCAACGATCCAGCGATGGGCGACGAACGTCCGCGTTCCGGCGACGACTTCAAGTCGCTGCTCTTCGAGCAGAAGCTGCGCATCGATGCCACCGGCGTGGTCAACATCAACAGTCATCATCCCCACTCACATCACCAGCACTCGCGTCCCCGATCCGCCGCCAGCAATGCCAATTCGATTGGCTCCGCTTCCGCTTCACCCTCCGCACCCGCCAGTCCCAGTTCGCAGCCGAAGCCGAGCTGTTCGCCGGCACGATCCGTCTCGGAGGCATCGCAGGGCGCACTCGACTTGACGCCGCGCGCCGCTGTTCCTGCCCCGTCGCAGCCACTTGCCGCCACGTCGCGCTCCCCGCCCCCGCCCAAGGAGAAGACAGTGAGTCCGCTGAGCCAGCAGTCCACTCCAGCACGCAGTCCCAACGCCTCCGTGTCCGTCTCCGCCTCAGCCTCTGCCTCCGTGTCTGCCTCGCAGCTGCTCTCCTCGCAGCTGGCACCGTCTGTGGGCATTGATTGCCTGCCGCCCGGCTTGCAGcatcatctgcagcagcagcatcagcatctgatgcagcagcaggcggcggtggcagcagcggcggctgcCCAGCATCATCACCATCAGATGCAGCAACATGCCGCCGCCCTGCACCAGCATCAGGAGCAACTGCGTCGCGAGGCACAGGAGGTGCAACAAaaggcggcagctgctgcggcagcggctgctgcccAGCGTCAGACATCGCCACAGCCTCCGACGCGTGCCGGGGAATCGCCTGGCGGGCCACCCGGCGGTGGTCAGCCCAATCCGTTGATCGGTGCCCGGCCGCCTTTCGGCATGTTCCCCAATCTGCCCATCTTCCCGCCGGCCACCACCCAGAATATGTGCAATGCCATGAATCAGATTGCCCAATCCGTGATGCCAGCGGCCCCATTCAACCCACTGGCATTGAGTGGGGTGCGGGGCAGCACCACCTGCGGCATCTGCTACAAGACATTCCCCTGCCACTCGGCGCTCGAGATTCACTACAGGAGCCACACCAAGGAGCGGCCCTTCAAGTGCAACATCTGCGACCGCGGCTTCACAACTAAGGGCAACCTCAAGCAGCACATGCTGACACACAAGATCCGCGACATGGAGCAGGAGACCTTCAGGAATCGAGCTGTGAAGTATATGAACGAGTGGAGCGATGAACGCGAATAA
Protein Sequence: MKNHLQNVLCAMRSDFKDNHQETINKMIQFGTVKYGIVKQLKDRARSAEKDIASDQEDNGACSPLTTATPASASAGNSPCPSRSPRRHSDDDDEVAGEGELLQVADSKEDKQDKPDKLKESVEQIEHRTDAIVEDHNHNNSSNHNNNNDSDNDNDNDNVADNDNNKAKAMTKPPEEHETNANANSNSSLPNSPTAATSSMEAPQKQLDVDVEMPQAEHEKSPATPPVSNATAAAATAAAAAAAAAQQFGATPVTLEAIQNMQMAIAQFAAKTIANGASGADNEAAMKQLAFLQQTLFNLQQQQLFQIQLIQQLQSQLALNQAKQSNEDDADEDVEPEEREDGETDTYEEEERIADMELRLKAEARMAESKARQHLINAGVPLRERSPSPAVSLKRKRGEDAGAKSVGGAKAFGQPPESAQDALSKLKEMENMPLPFGTDLASSIITNHDDLPEPNSLDLLQKRAQEVLDSASQGILANNMADDFAFGDKCGEGKGRNEPFFKHRCRYCGKVFGSDSALQIHIRSHTGERPFKCNVCGSRFTTKGNLKVHFQRHAQKFPHVPMNATPIPEHMDKFHPPLLDQMSPDSSPTQSPAPASGQASASSTSAHPPAMSFPGLQGLYRPPMELLKSLGAAAGSTAGLPHPFFPQMPGLGAALKHSQQQQVSQEMPTDLRKSSGPSSPHDEEDDDDDDDMTAVRLPVKAELLEEEKTEPETAATSAECADMEPEPEPLPLEVRIKEERVDEIEEQEEEQQQQREREQQQETPANRTPTASPKNPQHHHHHHHPAQQHHHMAGYPPVVQPIQPPAIMHAQCSPGSHSHLDQLPTPGQLPPTMPHREDFFAERFPLNFTTKTLSPEHHSPIRSPAGHAHAHIPRSPFFNPIKHEMAALLPRPHSNDNSWENFIEVSNTSETMKLKELMKNKKISDPNQCVVCDRVLSCKSALQMHYRTHTGERPFKCRICGRAFTTKGNLKTHMAVHKIRPPMRNFHQCPVCHKKYSNALVLQQHIRLHTGEPTDLTPEQIQAAEIRDPPPSMMPSHFMNPFAAAAFHFGAMPGGGPGSHNPGAGAGAAGMSGVPHNGALGSESSQGDLDDNMDCGDGDGDDFDDASSDHLSNDPAMGDERPRSGDDFKSLLFEQKLRIDATGVVNINSHHPHSHHQHSRPRSAASNANSIGSASASPSAPASPSSQPKPSCSPARSVSEASQGALDLTPRAAVPAPSQPLAATSRSPPPPKEKTVSPLSQQSTPARSPNASVSVSASASASVSASQLLSSQLAPSVGIDCLPPGLQHHLQQQHQHLMQQQAAVAAAAAAQHHHHQMQQHAAALHQHQEQLRREAQEVQQKAAAAAAAAAAQRQTSPQPPTRAGESPGGPPGGGQPNPLIGARPPFGMFPNLPIFPPATTQNMCNAMNQIAQSVMPAAPFNPLALSGVRGSTTCGICYKTFPCHSALEIHYRSHTKERPFKCNICDRGFTTKGNLKQHMLTHKIRDMEQETFRNRAVKYMNEWSDERE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00499142;
90% Identity: iTF_00542688;
80% Identity: -