Basic Information

Gene Symbol
Ubp1
Assembly
GCA_037043665.1
Location
JBAMAZ010000281.1:2460780-2473572[+]

Transcription Factor Domain

TF Family
CP2
Domain
CP2 domain
PFAM
PF04516
TF Group
Beta-Scaffold Factors
Description
This family represents a conserved region in the CP2 transcription factor family.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 0.15 9e+02 -1.1 2.5 92 133 26 66 17 89 0.64
2 3 1e-52 6e-49 166.3 0.6 18 189 411 579 393 587 0.88
3 3 5.3e-13 3.1e-09 36.4 0.8 188 221 630 663 620 665 0.89

Sequence Information

Coding Sequence
ATGGCGCTTACGTTTTTATCGCAAACTTCCGGCCTTTTGGATTTAAAAAGCATATTTGATCCACAATATTCattacaacaacatcaacaagaaaatcaacatcagcaacatcaacaacaacagcagcagcaacagcaactttgtTTGccatcacaacaacaacatcaacaacaacatcatcaaatATCACACATATCAACGAAATTTGATTTGAGCATTTTCAACGATTTCGACCAAATggaattcaataataatttgagtCGAAACCATAATCAGTACcagaataacaataacaataacgatAATAACAGTAgcatcaacaataataacaaccaaaataacaacaacggtGAACATTTAAATCAGGTCCAAAATCGTCATTGCATGAGCGgctatcatcatcagcatatTGGGTCAGATTATGAGCAAGTGATTAACTTTGTTGACTCACCACCGACCTCTGAGGAATCTTGGACAGACGCACAGTCCAAGGATTCACCAGGACCGCATATTATCGACGTACGGACAATTTACTCAGAGAGTGGTTCACGCAAAAGACGAATGGATTGGGACTCATTGGATATTGGCCAAAGTGAAAATTCGCCGACAACACAATCGGGCGACATACCCAATAAGCTAGCACATCTCGAGAAAGATAAACACAAACGTGAAAAGCATTCAGGTCGCAGCAGCTGGAGCGACGATATTGGCTTCGATCTGAACGCCGATTTTAATAGCAACTCATATTTGAACAATGAAAATTTCTTGGCCTTCTCGCCGAGCTTAACGGCATTGAAACAGGAGCCGCAAACGGAGCAGCTGAAACCGACTCCAAAGCTACCCTTGGACAGCAGTTCTGCGGGAGCTGTGCACAATATTGGCAAGATCGACAAGTCGCCATTGGGCGATGCCAATCATTCACCACAGCGCCCGGTCCAATCCCAGGAAGTGATTGGCGCTGGAACAGGAACCGTAACAGCTActggcaacagtggcagcgAAAGCGGTGGCAAGCATGAGTTGAACTCCACTATTATATGCGGCTGTGGCTCACCACAAAGCTCGCCCGCCTCAACGGAATTTGAACTGAAGGACAGTGCCACCAATAgaaatgcagctgcaactgacaAAACCATTGCTGCATCTGGCAACGAGGCTTATGCCCAGGCTCCACGCtctgagctgcagcagcaggtgagCGTTGTCGAAGCGGCCAAAATTGAGCCAAGCTCATCCAGTGGTGCATCACATGCCGAGGATCACAAATTTCAGTACATTTTGGCAGCGGCCACCTCAATTGCAACAAAGAACAATGAGGAGACTTTGACCTATTTGAATCAGGGTCAAAGCTATGAGatcaaattgaagaaaattgGTGATTTATCATTCTATCGCGATAAGATTTTGAAGAGCGTTATCAAAATCTGTTTCCACGAGCGTCGATTGCAGTTCATGGAACGCGAACAGATGCAACAATGGCAAGCATCGCGTCCTGGTGATCGCATCATTGAGGTGGATGTGCCATTATCGTATGGTTTGTGCCACGTGTCGCAGCCGTTGAGTTCGAGTGCATTGAACACGGTGGAGATCTTTTGGGATCCATTCAAGGAGGTCGGCGTCTACGTCAAGGTCAATTGCATTTCAACAGAGTTCACACCAAAGAAGCACGGTGGTGAAAAGGGTGTTCCGTTTCGTCTACAAATTGAAACCTATATAGAAAACTCACCagcaaatagcagcaacagtaacagtaacagcagcagcagcagcagcggcagcggtcCCAGTGTcaataacaacaccaacaacaacactagcAATGCAACAactatcaacaacaacaacacattaGGTGGCACATCGGACAGTCGTGCCGCACTCAATGGCAAACAGGCGGTGCATGCAGCTGCTTGTCAGATTAAGGTCTTCAAGCTAAAAGGCGCCGATCGCAAGCACAAGCAGGATCGGgaaaaaatacagaaacgGCCAACATCTGAGCAGGATAAATTCCAGCCCAGCTACGAATGCACCATAATGAATGATATATCATTGGACCTGATAATGCCAACCACCACAACAGGCTGCTACAGTCCCGAGTATATGAAACTGTGGCCGAATTCGCCGGTGCATGTACCAAAATACGATGGAATGCTTCCATTTGCGAGCAGCGCATCACCAGCGGCCAGCAGCAGTCCCATTGCGATCAATTCAGTGACATCAACCAATTCGCCAACATTGAAACTAATGGATGCCACAAATATGGTATCGCCGCCACACGTGCCAGCAGACATGGAAGACTATAACCAGAACATAATGCCGGACTCAACACCGGCACAAGTGACACAATGGCTGACCAATCATCGTCTGACGGCCTACTTAGCCACATTTACTCATTTCTCGGGCGCGGACATTATGCGCATGTCCAAGGAGGATCTTATACAAATCTGTGGACTTGCCGATGGCATACGTATGTTCAATATTTTACGCGCCAAAACGATTGCCCCACGTCTGACGCTCTATGCGAGCATGGATGGCTACAGCTACAATGCGATCTACTTGCTCTCTAACACGGCCAAGGAGTTGCAGCAGAAGCTGTACAAGTTGCCGGGCTTTTACGAGTTCATGGCGAAGGGCGGATCTGGTGGCGCCTTGGAGAATGGTAGTGttgcagctgcggctgctgctgctgcggcgctCTACAATAATTGGGGCATGCAGTCGAAATACTCTGGCAGCGGCTCGAACATATTCAATGAGGTTAACAAGAGTTGCGTGTATATTTCGGGTCCTTCGGGCATTCTTGTCAGCGTCACCGACGAGGTGCTCAACAATGAGATCAAGGATGGCAGTCTCTATTCCCTGGATGTGCAGGGCGGCAAAGTTGTCTTGAAATTTATCAATAAGCAGGATAGCAATTAA
Protein Sequence
MALTFLSQTSGLLDLKSIFDPQYSLQQHQQENQHQQHQQQQQQQQQLCLPSQQQHQQQHHQISHISTKFDLSIFNDFDQMEFNNNLSRNHNQYQNNNNNNDNNSSINNNNNQNNNNGEHLNQVQNRHCMSGYHHQHIGSDYEQVINFVDSPPTSEESWTDAQSKDSPGPHIIDVRTIYSESGSRKRRMDWDSLDIGQSENSPTTQSGDIPNKLAHLEKDKHKREKHSGRSSWSDDIGFDLNADFNSNSYLNNENFLAFSPSLTALKQEPQTEQLKPTPKLPLDSSSAGAVHNIGKIDKSPLGDANHSPQRPVQSQEVIGAGTGTVTATGNSGSESGGKHELNSTIICGCGSPQSSPASTEFELKDSATNRNAAATDKTIAASGNEAYAQAPRSELQQQVSVVEAAKIEPSSSSGASHAEDHKFQYILAAATSIATKNNEETLTYLNQGQSYEIKLKKIGDLSFYRDKILKSVIKICFHERRLQFMEREQMQQWQASRPGDRIIEVDVPLSYGLCHVSQPLSSSALNTVEIFWDPFKEVGVYVKVNCISTEFTPKKHGGEKGVPFRLQIETYIENSPANSSNSNSNSSSSSSGSGPSVNNNTNNNTSNATTINNNNTLGGTSDSRAALNGKQAVHAAACQIKVFKLKGADRKHKQDREKIQKRPTSEQDKFQPSYECTIMNDISLDLIMPTTTTGCYSPEYMKLWPNSPVHVPKYDGMLPFASSASPAASSSPIAINSVTSTNSPTLKLMDATNMVSPPHVPADMEDYNQNIMPDSTPAQVTQWLTNHRLTAYLATFTHFSGADIMRMSKEDLIQICGLADGIRMFNILRAKTIAPRLTLYASMDGYSYNAIYLLSNTAKELQQKLYKLPGFYEFMAKGGSGGALENGSVAAAAAAAAALYNNWGMQSKYSGSGSNIFNEVNKSCVYISGPSGILVSVTDEVLNNEIKDGSLYSLDVQGGKVVLKFINKQDSN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00497147;
90% Identity
iTF_00576108;
80% Identity
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