Basic Information

Gene Symbol
grh
Assembly
GCA_037043665.1
Location
JBAMAZ010000233.1:1701766-1733494[-]

Transcription Factor Domain

TF Family
CP2
Domain
CP2 domain
PFAM
PF04516
TF Group
Beta-Scaffold Factors
Description
This family represents a conserved region in the CP2 transcription factor family.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 3 1.7e+04 -14.7 19.0 78 120 245 285 174 305 0.48
2 3 0.67 3.9e+03 -3.2 2.6 96 106 557 567 526 585 0.52
3 3 4.2e-63 2.4e-59 200.3 0.5 24 221 697 889 683 891 0.94

Sequence Information

Coding Sequence
ATGATGCAGGATGCAACCAGCAGCTATGCCATCTCCTACACGGACTGGATAGCTGAGTCAcgGCGCTATACCTTGGAGCCTGCACAGCAAGCAACGCCGCCCccgccaccagcaccaccacagcagcaacaacaccagcagcaacaccagcagcaacagcagcagcagcagcaacttcatcatcagcaacagctgcatccgcatccacatcatcatcttcaAGCACACCATCttaatcatcatcagcatcatcatcagcattatGTGAGTCAATCGCCACCGCATTACTCGTATGTGCCGCCGCCCAAGGATGCAGCCGTTCAGTTGCAACAGCACCTGCCGCTGACCGCCGCTGGGCTCATGCAATCGGTGGCCGACGAGATTCAACTGAGCGAACAGCAATCGACACCGCCGCCACCAACACCGCccccaccaccgccgccgccgccaacagCACACGCCTCCAACACCACTTATGCGGTCTACAGCTACTACCGAGATGTCGATGTGGATGTCGATGTGGATgccgagcaacagcagcagcagcagcagcagcatcagcagcagcagcagcacaatgcTAGATCACAACAAGATCAGCAGCTACTGTGGAGCAATGCGAGCAGCACCGGCAAACTCAATGGCCAGACCACACCTATCGATGTCTCTGGCCTATcgcaaaatgaaattcaaggCTTTCTGCTTGGCTCACACCCCTCATCGTCGGCCGCCACAACCGGCGTTGtgtccacaacaacaatctcaaatcagcaacatcagcagcagcagcaacaacagcaacaacaacaacaacagcaacatcagcagcaacagcaacaacagcagcagcagcatcaacagcagcagcagcaacaacagcaacaacaacaaccgccaCATCCCAGCGACATTGTAACCATAACCACGGCGGGAGTGGGGAGTGCGGGCTCAATTGTCTCCGCCgcagtgcaacagcagcaacagcagcagcagcagcaacaattgctgagCATTAAACGTGAACCCGAAGACTTGAGCAAGGATCCCAAGAATGGCAATCTGGGCGCCGCAGCAAACGGTTCAGTCATAACGCAGAAGATATTGCGCGTGGATGCAGCTAGAACTGAAGCtgaggcaactgcaactgcaactgcattcGAAATTAGCGAtaaaacagctgctgcagcaacaacaacaacaagtgaaacTGCAACTAGTCCCGCCAGCGCCACAACAGATCTAGAGATGTATGCTACAACGGGCGGCACACAGATTTATCTACAGACCTCACATCAGAACAGCACCGGCCCCAGCACACAGCAGAGCACACTGCAAGCCCAGAGTCCCAGTCCCGGGCCGTATATCACAACGGATAGCTATGGCATGTATACGGCCACACGATTGCCGCCCGGCCCACCGCCCGCAACCACATTCATAACGGAACCCTATTACCGCGAATACTTTGCGCCCGATGGCCAGGGTGGCTATGTGCCCGCCGGCACAGCGCGCAGCCTCTACGGCGAGGATGTATCCGTGGCGGCGGCCACACAACCACAGCCCGTGGGCGGTGTCTATGAGGCGCGATTCACCAGCAATGggcccaccaccaccacagtGCTAACCAGCAGCAATGCACACCACCacagtcaacagcagcagcagcagcagcaacagcagcaacagcaacagcagcagcagcaacagcaacaacaacagcagcaacaggaacagtCGGGCAAAAGCGGCGGTACTCCACTATATGCCAAGGCTATAACGGCGGCGGGTCTGACCGTCGATTTGCCCAGTCCCGATTCGGGCATTGGCACGGATGCCATTACGCCGCGGGATCAAAATCACATACAGCagTCCTTCGACTATACGGAACTTTGTCAGCCAGGCACCTTAATTGATGCGAATGGCAGCATACCCGTTTCGGTGAACAGCATCCAGCAGCGCACTGTGGTGCATGGCAGCCAGAATAGTCCAACCACATCACTGGTGGACACAAGCACAAATGGCTCGACACGCTCGAGACCCTGGCACGATTTCGGACGCCAAAATGATGctgataaaatacaaataccaaaaatCTTCACAAATGTGGGCTTTCGTTATAACTTGGAGAGCCCGATCAGCTCGTCACAGCGTCGAGAGGACGATCGCATCACCTACATCAACAAGGGTCAGTTCTATGGCATTACGCTGGAGTATGTGCACGATGCGGATAAGCCAATCAAGAATACAACAGTTAAGAGTGTGATCATGTTGATGTTTCGCGAGGAGAAGAGTCCCGAAGATGAGATAAAGGCCTGGCAATTCTGGCACAGTCGTCAGCATTCCGTGAAGCAAAGAATCTTGGATGCAGATACAAAGAACTCGGTTGGTCTCGTTGGTTGCATTGAGGAAGTGTCGCACAATGCCATCGCCGTCTACTGGAATCCGCTCGAGAGCTCTGCCAAGATCAACATTGCAGTTCAGTGCCTCAGCACGGATTTCAGCAGTCAAAAGGGTGTTAAGGGTCTGCCGTTGCACGTACAAATCGATACGTTTGAGGATCCGCGGGATGCGACAGTCTTTCATCGCGGCTACTGTCAGATAAAGGTCTTCTGCGATAAGGGCGCGGAGCGTAAGACGCGCGATGAGGAGCGTCGTGCCGCCAAGCGCAAAATGACAGCCACTGGACGCAAGAAGCTGGACGAGCTCTATCACCCGGTCACAGATCGCTCCGAGTTCTATGGCATGCAAGATCTGGCCAAGCCGCCAGTGCTCTTCTCGCCCGCCGAGGATATGGAAAAGGATGATCGACCTTGGCCGGATTTTGACAACAGCTTCTATGGGCATGAGACTGACTCGCCGGAGCTGAAAGGCGCCTCGCCGTTCTTGCTGCACGGTCAGAAggtggccacgcccacgctCAAATTTCACAATCATTTTCCGCCCGACATGCAGACTGACAAAAAGGATCATATATTGGATCAGAATATGTTAACCAGTACGCCCATGTCCGATTTTGGCCCACCAATGAAGCGGGGCAGAATGACGCCGCCGACAACGGAGCGTGTCATGTTATATGTGCGGCAGGAGAACGAGGAGATCTACACGCCGCTCCATGTGGTGCCACCAACCACCATTGGTCTGCTAAATGCGattgaaaacaaatacaaaatctcAACAACGAgcataaataacatatatcgCACAAATAAGAAGGGGATTACGGCGAAAATTGATGATGATATGATATCCTTCTACTGCAACGAGGACATTTTCTTGCTGGAAGTGCAACAGATTGAGGATGATCTGTACGATGTGACGCTCACGGAGCTGCCCAATCAGTAG
Protein Sequence
MMQDATSSYAISYTDWIAESRRYTLEPAQQATPPPPPAPPQQQQHQQQHQQQQQQQQQLHHQQQLHPHPHHHLQAHHLNHHQHHHQHYVSQSPPHYSYVPPPKDAAVQLQQHLPLTAAGLMQSVADEIQLSEQQSTPPPPTPPPPPPPPPTAHASNTTYAVYSYYRDVDVDVDVDAEQQQQQQQQHQQQQQHNARSQQDQQLLWSNASSTGKLNGQTTPIDVSGLSQNEIQGFLLGSHPSSSAATTGVVSTTTISNQQHQQQQQQQQQQQQQQHQQQQQQQQQQHQQQQQQQQQQQQPPHPSDIVTITTAGVGSAGSIVSAAVQQQQQQQQQQQLLSIKREPEDLSKDPKNGNLGAAANGSVITQKILRVDAARTEAEATATATAFEISDKTAAAATTTTSETATSPASATTDLEMYATTGGTQIYLQTSHQNSTGPSTQQSTLQAQSPSPGPYITTDSYGMYTATRLPPGPPPATTFITEPYYREYFAPDGQGGYVPAGTARSLYGEDVSVAAATQPQPVGGVYEARFTSNGPTTTTVLTSSNAHHHSQQQQQQQQQQQQQQQQQQQQQQQQQQEQSGKSGGTPLYAKAITAAGLTVDLPSPDSGIGTDAITPRDQNHIQQSFDYTELCQPGTLIDANGSIPVSVNSIQQRTVVHGSQNSPTTSLVDTSTNGSTRSRPWHDFGRQNDADKIQIPKIFTNVGFRYNLESPISSSQRREDDRITYINKGQFYGITLEYVHDADKPIKNTTVKSVIMLMFREEKSPEDEIKAWQFWHSRQHSVKQRILDADTKNSVGLVGCIEEVSHNAIAVYWNPLESSAKINIAVQCLSTDFSSQKGVKGLPLHVQIDTFEDPRDATVFHRGYCQIKVFCDKGAERKTRDEERRAAKRKMTATGRKKLDELYHPVTDRSEFYGMQDLAKPPVLFSPAEDMEKDDRPWPDFDNSFYGHETDSPELKGASPFLLHGQKVATPTLKFHNHFPPDMQTDKKDHILDQNMLTSTPMSDFGPPMKRGRMTPPTTERVMLYVRQENEEIYTPLHVVPPTTIGLLNAIENKYKISTTSINNIYRTNKKGITAKIDDDMISFYCNEDIFLLEVQQIEDDLYDVTLTELPNQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00476386;
90% Identity
iTF_00535075;
80% Identity
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