Basic Information

Gene Symbol
grh
Assembly
GCA_035042405.1
Location
JAWNLI010000487.1:1958454-1988816[-]

Transcription Factor Domain

TF Family
CP2
Domain
CP2 domain
PFAM
PF04516
TF Group
Beta-Scaffold Factors
Description
This family represents a conserved region in the CP2 transcription factor family.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 2 1.7e+04 -6.4 8.6 84 112 261 289 214 312 0.51
2 3 0.62 5.3e+03 -3.6 2.1 97 110 562 575 534 594 0.51
3 3 2.8e-63 2.4e-59 200.3 0.5 24 221 707 899 693 901 0.94

Sequence Information

Coding Sequence
ATGCAGGATGCAACCAGCAGCTATGCCATCTCCTACACGGGCTGGATAGCTGAGTCACGGCGCTATAGCTTGGAGGCTGCACAGCATGCAACGCCGCCCCCGCCATCAGCAacaccacagcaacagcaacagcagcagcagccgcaccagcagcagcatctgcatcAGCAacttcatcatcagcaacagcagcatctacatccacatccacatccggAACCACATCATCAGCTTCAAGCACACCATCttaatcatcatcagcaacatcatcagcattaTGCGAGTCAATCGCCACCGCATTACTCATATGTGGTGCCGCCCAAGGATGCAGCAGCTcagttgcaactgcatctGCCGCTGACCGCCGCTGGGCTCCTGCAATCGGTGGCCGATGAGATTCAACTAAGCGAACAGCAATCGACACAGCCGCCAGCAGCACCGCCCCCACCACCGcggccgccgctgccgctgccgctgccgccaaCAGCACACgcctccaactccaactatGCGGTCTACAGCTACTACCGAGATGTCGATGTGGATGTCGATGTGGAtgtcgagcagcagcagcaggagcagcagctgcatcagcagcaacacaatTCTAGATCACAACAAGATCAGCAGCTACTGTGGAGCAATGCGAGCAGCACCGGCAAACTGAATGGCCAGACCACACCTATCGATGTCTCTGGCCTATcgcaaaatgaaattcaaggCTTTTTGCTTGGCTCACACCCCTCCTCGTCGGCCGCCACAACCGGCGTTGTgtccacaacaacaatctcaaatcagcaacatcagcagcaacagcaacaacaacagcaacagcaacatcagcagcaacagcagcatcaacagcagcagcagcagcagcagcaacaacagcaacaacaaccgccaCATCCCAGCGACATTGTGACCATAACCACGGCGGGAGTGGGGAGTGCGGGCTCAATTGTCTCCGCAGCagtacaacagcagcaacagcagcagcaacaattgctgagCATCAAACGTGAACCCGAAGACTTGAGCAAGGATCCCAAGAATGGCAATCTGGGCGCCGCAGCAAACGGTTCAGTCATAACGCAGAAGATATTGCGCGTGGATGCAGCTAGAACTGAAGCtgaggcaactgcaacttcaactgcaactgcaactgcaactgcattcGAAATTAGCGAtaaaacagctgctgcagcagcaacaacaacaacaacaagtgaaaCTGCAACTAGTCCCGCCAGCGCCACAACAGATCTCGAGATGTATGCTACAACGGGCGGCACACAGATTTATCTACAGACCTCACATCAGAACAGCACCGGCCCCAGCACACAGCAGAGCACACTGCAAGCCCAGAGTCCCAGTCCCGGGCCGTACATCACAACGGATAGCTATGGCATGTATACGGCCACAAGATTGCCACCAGGCCCACCGCCCGCCACCACATTCATAACGGAACCCTATTACCGGGAATACTTTGCGTCCGATGGCCAGGGTGGCTATGTGCCCGCCGGCACAGCACGCAGCCTCTACGGCGAGGATGTATCCGTGGCTGCGGCCACACAACCACAGCCCGTGGGCGGTGTTTACGAGGCGCGATTCACCAGCAATGGcccaaccacaaccacagTGCTAACCAGCAGCAATGCACACCAACACAgtcaacagctgcaacagcaacagcagcagcagcagcaacaacagcagcaacaacagcaacagcaaccgcagcatcagcagcaggaacaatCGGTTAAAAGCGGCGGTACTCCACTATATGCCAAGACTATAACCGCGGCGGGTCTCACCGTCGATTTGCCAAGTCCCGATTCGGGCATAGGAACGGATGCAATTACGCCGCGGGATCAAAATCACATACAGCAGTCCTTCGATTACACGGAACTTTGTCAGCCGGGTTCCTTAATTGATGCGAATGGCAGCATACCCGTTTCGGTCAACAGCATCCAGCAGCGCACCGTGGTGCATGGCAGCCAGAATAGTCCAACCACATCGCTGGTGGACACTAGCACAAATGGCTCGACACGCTCGAGGCCCTGGCACGATTTCGGACGCCAAAATGATGCtgataaaatacaaataccaaaaatcTTCACAAATGTGGGCTTCCGTTATAATTTGGAGAGCCCCATCAGCTCGTCACAGCGTCGGGAGGACGATCGCATCACCTACATCAACAAGGGTCAGTTCTATGGCATTACGCTGGAATATGTGCATGATGCGGATAAGCCAATCAAGAATACAACAGTTAAGAGTGTGATCATGTTGATGTTTCGCGAGGAGAAGAGTCCCGAAGATGAGATAAAGGCCTGGCAATTCTGGCACAGTCGTCAGCATTCCGTGAAGCAAAGAATCTTGGATGCAGATACAAAGAACTCGGTTGGTCTCGTTGGTTGCATTGAGGAAGTGTCGCACAATGCCATCGCCGTCTACTGGAATCCGCTCGAGAGCTCTGCCAAGATCAACATCGCAGTTCAGTGCCTCAGCACGGATTTCAGCAGTCAAAAGGGTGTCAAAGGTCTGCCGTTGCACGTGCAAATCGATACGTTTGAGGATCCGCGGGATGCGACGGTCTTTCATCGCGGCTACTGTCAGATAAAGGTCTTCTGCGATAAGGGCGCGGAGCGTAAGACGCGCGATGAGGAGCGTCGCGCCGCCAAGCGCAAAATGACAGCCACTGGACGCAAGAAGCTGGATGAGCTCTATCATCCGGTCACAGATCGCTCCGAGTTCTATGGCATGCAGGACCTGGCCAAGCCGCCAGTACTCTTCTCGCCCGCCGAGGATATGGAAAAGAGCTTCTATGGGCATGAGACTGACTCGCCGGAGCTGAAAGGTGCCTCGCCGTTCTTGTTGCACGGTCAGAAGGTGGCCACGCCCACGCTGAAATTTCACAATCATTTTCCGCCCGACATGCAGACTGACAAAAAGGATCATATATTGGATCAGAATATGTTAACCAGTACGCCCATGTCCGATTTTGGGCCACCAATGAAGCGGGGCAGAATGACGCCGCCGACAACGGAGCGTGTCATGTTATATGTGCGGCAGGAGAACGAGGAGATCTACACGCCACTCCATGTGGTGCCCCCGACCACCATTGGCCTGCTAAATGCGattgaaaacaaatacaaaatctCAACAACGAgcataaataacatatatcGCACAAATAAGAAGGGAATTACGGCGAAAATTGATGATGATATGATTTCCTTCTACTGCAACGAGGATATTTTCTTGCTGGAAGTCCAACAGATTGAGGATGATCTGTACGATGTGACGCTCACCGAGCTGCCCAATCAGTAG
Protein Sequence
MQDATSSYAISYTGWIAESRRYSLEAAQHATPPPPSATPQQQQQQQQPHQQQHLHQQLHHQQQQHLHPHPHPEPHHQLQAHHLNHHQQHHQHYASQSPPHYSYVVPPKDAAAQLQLHLPLTAAGLLQSVADEIQLSEQQSTQPPAAPPPPPRPPLPLPLPPTAHASNSNYAVYSYYRDVDVDVDVDVEQQQQEQQLHQQQHNSRSQQDQQLLWSNASSTGKLNGQTTPIDVSGLSQNEIQGFLLGSHPSSSAATTGVVSTTTISNQQHQQQQQQQQQQQHQQQQQHQQQQQQQQQQQQQQPPHPSDIVTITTAGVGSAGSIVSAAVQQQQQQQQQLLSIKREPEDLSKDPKNGNLGAAANGSVITQKILRVDAARTEAEATATSTATATATAFEISDKTAAAAATTTTTSETATSPASATTDLEMYATTGGTQIYLQTSHQNSTGPSTQQSTLQAQSPSPGPYITTDSYGMYTATRLPPGPPPATTFITEPYYREYFASDGQGGYVPAGTARSLYGEDVSVAAATQPQPVGGVYEARFTSNGPTTTTVLTSSNAHQHSQQLQQQQQQQQQQQQQQQQQQPQHQQQEQSVKSGGTPLYAKTITAAGLTVDLPSPDSGIGTDAITPRDQNHIQQSFDYTELCQPGSLIDANGSIPVSVNSIQQRTVVHGSQNSPTTSLVDTSTNGSTRSRPWHDFGRQNDADKIQIPKIFTNVGFRYNLESPISSSQRREDDRITYINKGQFYGITLEYVHDADKPIKNTTVKSVIMLMFREEKSPEDEIKAWQFWHSRQHSVKQRILDADTKNSVGLVGCIEEVSHNAIAVYWNPLESSAKINIAVQCLSTDFSSQKGVKGLPLHVQIDTFEDPRDATVFHRGYCQIKVFCDKGAERKTRDEERRAAKRKMTATGRKKLDELYHPVTDRSEFYGMQDLAKPPVLFSPAEDMEKSFYGHETDSPELKGASPFLLHGQKVATPTLKFHNHFPPDMQTDKKDHILDQNMLTSTPMSDFGPPMKRGRMTPPTTERVMLYVRQENEEIYTPLHVVPPTTIGLLNAIENKYKISTTSINNIYRTNKKGITAKIDDDMISFYCNEDIFLLEVQQIEDDLYDVTLTELPNQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00476386;
90% Identity
iTF_00535075;
80% Identity
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