Dcyr012824.1
Basic Information
- Insect
- Drosophila cyrtoloma
- Gene Symbol
- hang
- Assembly
- GCA_035042485.1
- Location
- JAWNLH010000885.1:13102931-13108801[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.067 4.3 7.9 0.1 4 23 141 161 141 161 0.95 2 13 0.0016 0.11 13.0 0.1 1 23 169 192 169 192 0.96 3 13 0.00012 0.008 16.5 0.2 2 23 283 304 282 304 0.97 4 13 0.00023 0.015 15.6 2.9 2 23 404 426 403 426 0.97 5 13 0.018 1.2 9.7 0.2 2 23 435 457 434 457 0.95 6 13 0.0011 0.071 13.5 0.3 1 23 470 493 470 493 0.97 7 13 0.0016 0.1 13.0 0.9 1 23 569 592 569 592 0.96 8 13 0.055 3.6 8.2 0.4 2 19 600 617 600 618 0.94 9 13 0.0013 0.081 13.3 0.3 3 23 731 751 730 751 0.98 10 13 0.00085 0.055 13.9 0.1 1 23 786 808 786 808 0.97 11 13 0.00048 0.031 14.7 0.6 2 23 898 920 897 920 0.93 12 13 0.0052 0.34 11.4 0.3 3 23 976 996 976 996 0.98 13 13 5.4e-05 0.0035 17.6 2.1 1 23 1430 1452 1430 1452 0.99
Sequence Information
- Coding Sequence
- ATGACCTGCGATGCGAAACTGGAGACGCATCAGCGATTCCTCGACCATGTCTATCAGGATCATTTGGGCGGGGTGAGCAGTGATAATGCATCGTCCACGGCGACGACCAGCGGCATGGATCATTCGCCCGGGAAGCGCAGTTTGCTGGGCGCCCTTGGCATCGGCGTTGTCAGCCAATCCAATGATGAGTCGCGCAGCAgtaacaaccacaacaacaacaataataacaacagcaacaacaacaacaacaatacaccTCAACCGACCCCTAAACTACCAACCgtagcaggagcagcaacagttgctggaggaggaggaggaggcagcagcagcagcagcagcaaccagtgGCGGATCGACAACATCGGGCAGTCGAGATGCACCCAAATCACAGTATTTTCACGAATGCCACAGGTTCGTCCGATCTGTGGCCAGCAGtacaacaactataacaatGTGTTGCGCCACATGGAATCGAAGCATCCCAACAAATTGCCCGAGACATACAAGTGTGTCCGTTGCGGATTGGGATATCCGCGGATCTCCTATCTGCGGGAGCACATGATCAATGTGCATGGCGTTGACAAGAATCGGCATTCGGGCGGCTTTGAATATATTGTGAATGCCGATGCGGTTAAATTGGCGGATGGCAGCACGCCCAATGTCTATACGGGACGATATGATTATGTGATGAAGGATCTGATGTCTATAACAAATGGTGGGACACTCgatgatgatgacgatgatggcGGCACCGGCGGCAACATTGCCAAAAAGATGAGACTCGAtgatagcagcaacaacagcagcagcatcaacatgAGCAGCATTGCCAACCAGCAGAAGGAGTGCCTCATCTGCAATGCGGTGTTTAGCAACAATATTGGTCTGTCGAATCATATGCGTTCCCATTACACAGCATCGATAACGACGAGTGCTGCTCTGGCGGCTGCCAATCGCATGACGCCCAAATCGCTGACAATAACAGCGACGCCACCGCTGGAGacaacgacagcaacaacaactgcagctggagttgcagcagtggcagcatcatcatcaggaGCAGTCgcctcaacagcaacagcatcaggaTCAGGCTCATCATCCGGCAACTTGCCGCCAGCAATGGTGCACCAGACGGCACAGGAGCAGGCGGTATTCCGTCGCAGTCTGGATCAGGCGGCCGATCGACGATTCCGTCGAATGCGCTGTCGCATCTGTCAGCGCAGATTCAGTTCGAAGAAATCGTATCGCTACCACATGCTCACCGACCACCAGGTGCAGAATGTGCAGTTCATCAAGTGCAAGCTGTGCAACGCGGAGTTCGCCTACGAGAAGGGGCTCAAGGTGCATCTGTTCAAGGTGCACGGCCGGGCCATCAAGGACGAGATGATTATCAAGCAGTTCGAGTGCGATGTCTGCTCCACGGTCTACAGTTCCGAGCTGGaattgcagcagcacaagCGCAGCGTACACAAGTCACAAGCCAGTGATTCATCGTCATCAGcagctggtggtgctggtgctgctggtgctggtgctgctggcaaATCATCATTGAAATCTGCCACTGCTACTACCTCATCGACAGCTGAGCTGGTCGCAGACACATCATCCTCTGCAAATATTGTCCATCCAATTTCAACACCAACAAGAACGGCCATCCACATCAACTCGCACGACGAGTTCGACTCGAATGATTACTCGTGCAAGGACTGCGGCAATGTCTACAGCGGCCGCAAGAGCCTCTGGGTGCATCGCTACAAGAAGCATCCGCAGGTGCCGGATCCCGCCGAGTGCACGCTCTGCCGCAAGATGTTCTTCGATCGCCAGATGCTGGAGAATCATACGCCCACCTGCAATCGCAAGCCAATCACTGCCACCGGCGCCCATCAGcaggatcagcagcagcagcagcagcagcagcaacaacaacaacaacaacagcagcaacaacagctgcagctgcaacatcaTCAGCGACTCATCTTCAAGCACAAAAcgggcgatgatgatgacgaggaggaggacgatGATCCGTTGCTGCTAATGGACGATGGCGGTGGCGGCAGCAATGATAGCAATGCTGGCAATGCCattgcatcagcagcagcagcagcggcagcagcagcagcagcagtcagaaTAAATACGAGCACAATGAAGATACGCATTCCGGAGGTTGCATGCACCATTTGCGGTGCCCGTTTCACCGATCAGGAAATATTCACCAAGCACATACAGAAACACGAACAGGAACTGTATGTGGACAATCCGTTGGCGGCGATGTTCGATGATGGGCCAGCGGATGCCGGACAGTTTCAGGTTGAGCACCAGAACGAGAATGGGGAATACGCGTGCGATTTGTGCACCAAGACGTTCCCGCAGGTGATAGCGCTCAAGGTGCATCGCAAGTGGCATTTCAGAGGTGATAGCAAGCAGATCCCAATCAACGACGGCGAAGCGACAACGctgaacaacagcagcaacaacagcagcagcagcaacaacaacaacaacaattcgcTGAGCTCATCATCGATGCTGCATCTACGCGAACTGCATGCGGTGGGCCTGATGcccaatcagcagcaacaccaaaaacaacaacagcaacaacaacagcagcagcagcagcagcagcagcaacaacggaCGAGCAAATCAATGAAACGGAAACGTGAACTGAAATGCGAATATTGCGCCTCCACAttcattagcaacaacaacctgcGACGCCACATGTACGAGCTGCACAAGCACGAGGTCAGCAACCTGCCAGAGCCGCCCGTGATTGAGGTGGATGAGCCGTTGGCGTGTCGCCGTTGCGGCGATCTACAATTTGATACCAAAGAGCAGTGGATCGAACATAAGCTGGCCGATGCGAGAGTGGTGCGTCCATTCTGTCCATTCCAATGGGGCTGTGATCTGTGCGGCGAGTATTTGTCGCGCAAGGAGAAGCTCATCAATCACATTAACAATCATCTCAAGGAGGATGTGATTGTGCCGGTCGCCACCAAGCCACCAGCACCGGCAGCAGCCCATAAaactgcagcggcagcggcagcagcagcagcaacaacaacagcggcaacaacaacaacaacaattgccgccgcagcaacacagcaggaggatgAGGACCTGCAGCTGGATGATGAGAAGCTAgcgaagcagcagcaccagcagcaacaggaggaggaggaggatgataGTGATATGGATGATGATAGTCATAGTGGCAATGATGATGAGGAGGGCAGCACCAGTgccgacgatgatgatgatgatgacgatgatgatgaggagggCGACgtcgatgacgacgatgatgatgatgacgaagaagaagacaacgacaacggcgacAATGTTGTTGCACAGCAGCAAAtactgcaacaacagcctcaaaatacaaacagcaacaccaacaacaacaacagcagcagcagcgcaattGAAAATGACGACGATCTCATTGAGGAGGTGATCGAGGATGATGGCATTGTCGAGCAGCTGGAcgtcgatgatgatgaggaagacgatgatgatgatgacgacgacgatgatgatgatggcgaagacgatgacgatatcgatgaggatgaggacgaggacgatgaGCAACATCAACCGAGGCGCCTCAATTTCGACTACTCGCGCACCGACAGCGCCAAGCTAAATGGCAACGGTGGCAAACAGTCTGTGGCAAAATCAAAGACACAGCCACAGTTGCAGccacagttgcagcaacagttgcagacACAGCCAATGCTGGTCATGCACAGTAGTAGTAGTCGCCACGTGGATGATGGCGAGGAGGAGGTGGATGATAtggatgatgatgttgatgacgatgatgttgTGGGTGAAGCGATGACCATTGATGATATTATTGAAGAGGATGATGGTGTGGATGATGACGATGTGGTTGGTGTcggtggtggtgttgttgaggatgatgatgatgatgacgaggaagatgatgatgacgacgatgatgatgacgatgatgttgAGGAGGAcatggatgatgatgatgatgatggggacGACGACGATGCCGGTGCCGATGTCAACAACACCAATATTGGCAACGGTGTTGGCCGTGTGGGTCGAGAAGatgctgatggtgatggtgatggggatggtgatggtgatggtgatggtgatggtgatggtgatgttGATGGTGGTACATCATCATCTGAGAGCgagtcgacaacaacaacatcgcaTTCAACTGCGGCACATGGCGCTGCCGCTGATCAGTCTAATTCCAGCTATACGTGTGATCTATGTCAACTTTGTTTCGATTCCCAGGAGCTACTGCAGACACATATTAAAAGTCATTTTCTCCATGGGCCATCGGcggggagcagcagcaacagcaacaagagcaacggCGCCAGCAGAAgcaccaataacaacagcaacaacaacagtagcaacagcaacagcagtaacaaaaTCAATACCAAAAAGTCCGGCTTGGATGCAacgaagacaacaacaacaacaacaacaacagttaagGCTGCTGCAGTAGCGGACGCTGTAACGGGCTTCAACTGA
- Protein Sequence
- MTCDAKLETHQRFLDHVYQDHLGGVSSDNASSTATTSGMDHSPGKRSLLGALGIGVVSQSNDESRSSNNHNNNNNNNSNNNNNNTPQPTPKLPTVAGAATVAGGGGGGSSSSSSNQWRIDNIGQSRCTQITVFSRMPQVRPICGQQYNNYNNVLRHMESKHPNKLPETYKCVRCGLGYPRISYLREHMINVHGVDKNRHSGGFEYIVNADAVKLADGSTPNVYTGRYDYVMKDLMSITNGGTLDDDDDDGGTGGNIAKKMRLDDSSNNSSSINMSSIANQQKECLICNAVFSNNIGLSNHMRSHYTASITTSAALAAANRMTPKSLTITATPPLETTTATTTAAGVAAVAASSSGAVASTATASGSGSSSGNLPPAMVHQTAQEQAVFRRSLDQAADRRFRRMRCRICQRRFSSKKSYRYHMLTDHQVQNVQFIKCKLCNAEFAYEKGLKVHLFKVHGRAIKDEMIIKQFECDVCSTVYSSELELQQHKRSVHKSQASDSSSSAAGGAGAAGAGAAGKSSLKSATATTSSTAELVADTSSSANIVHPISTPTRTAIHINSHDEFDSNDYSCKDCGNVYSGRKSLWVHRYKKHPQVPDPAECTLCRKMFFDRQMLENHTPTCNRKPITATGAHQQDQQQQQQQQQQQQQQQQQQQLQLQHHQRLIFKHKTGDDDDEEEDDDPLLLMDDGGGGSNDSNAGNAIASAAAAAAAAAAAVRINTSTMKIRIPEVACTICGARFTDQEIFTKHIQKHEQELYVDNPLAAMFDDGPADAGQFQVEHQNENGEYACDLCTKTFPQVIALKVHRKWHFRGDSKQIPINDGEATTLNNSSNNSSSSNNNNNNSLSSSSMLHLRELHAVGLMPNQQQHQKQQQQQQQQQQQQQQQQRTSKSMKRKRELKCEYCASTFISNNNLRRHMYELHKHEVSNLPEPPVIEVDEPLACRRCGDLQFDTKEQWIEHKLADARVVRPFCPFQWGCDLCGEYLSRKEKLINHINNHLKEDVIVPVATKPPAPAAAHKTAAAAAAAAATTTAATTTTTIAAAATQQEDEDLQLDDEKLAKQQHQQQQEEEEDDSDMDDDSHSGNDDEEGSTSADDDDDDDDDDEEGDVDDDDDDDDEEEDNDNGDNVVAQQQILQQQPQNTNSNTNNNNSSSSAIENDDDLIEEVIEDDGIVEQLDVDDDEEDDDDDDDDDDDDGEDDDDIDEDEDEDDEQHQPRRLNFDYSRTDSAKLNGNGGKQSVAKSKTQPQLQPQLQQQLQTQPMLVMHSSSSRHVDDGEEEVDDMDDDVDDDDVVGEAMTIDDIIEEDDGVDDDDVVGVGGGVVEDDDDDDEEDDDDDDDDDDDVEEDMDDDDDDGDDDDAGADVNNTNIGNGVGRVGREDADGDGDGDGDGDGDGDGDGDVDGGTSSSESESTTTTSHSTAAHGAAADQSNSSYTCDLCQLCFDSQELLQTHIKSHFLHGPSAGSSSNSNKSNGASRSTNNNSNNNSSNSNSSNKINTKKSGLDATKTTTTTTTTVKAAAVADAVTGFN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -