Basic Information

Gene Symbol
tfcp2
Assembly
GCA_035042485.1
Location
JAWNLH010000672.1:2150309-2163107[-]

Transcription Factor Domain

TF Family
CP2
Domain
CP2 domain
PFAM
PF04516
TF Group
Beta-Scaffold Factors
Description
This family represents a conserved region in the CP2 transcription factor family.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 0.44 3.7e+03 -3.2 2.7 102 132 33 63 20 124 0.70
2 3 2.7e-53 2.3e-49 167.6 0.8 17 189 412 581 395 591 0.88
3 3 3.6e-13 3e-09 36.4 0.8 188 221 632 665 622 667 0.89

Sequence Information

Coding Sequence
ATGGCGCTTTCGTTTTTATCGCAAAGTTCCGGCCTTTTGGatttaaaaagcatatttGATCCACAATATTCattacaacaacatcaacaagaaaatcaacatcagcaacatcaacaacaacagcagcagcaactttatttgccatcacaacaacaacatcaacaacaacattatcaAATATCACACATATCAACGAAATTTGATTTGAGCATTTTCAACGAATTCGACCAAATggaattcaataataatttgagtCGAAACCACAATCAGTACcagaataacaataacaataataataacaataacgatAATAACAGTAGcatcaacaataataataaccaaaataacaacaacggcgaACATTTAAATCAGGTCCAAAATCGTCATTTCATGAGCGgctatcatcatcagcatatTGGGTCAGATTATGAGCAAGTGATTAACTTTGTTGACTCACCACCGACCTCTGAGGAATCTTGGACAGACACACAGTCCAAGGATTCACCAGGACCGCATATTATCGACGTACGGACAATTTACTCAGAGAGTGGTTCACGCAAAAGACGAATGGATTGGGACTCATTGGATATTGGCCAAAGTGAAAATTCGCCGACAACACAATCGGGCGACATACCCAATAAGCTACCACATCTCGAGAAAGATAAACACAAACGTGAGAAGCATTCAGGTCGCAGCAGCTGGAGCGACGATATTGGCTTCGATCTGAACGCCGATTTTAATAGCAACTCATATTTGAACAATGAAAATTTCTTGGCCTTCTCGCCGAGCTTAACGGCATTGAAACAGGAGCCGCAAACGGAGCAGCTGAAACCGACTACAAAGCTACCCTTGGACAGCAGCTCTGCGGGAGCTGTGCACAATATTGGCAAGATCGACAAGTCGCCATTGGGCGATGCCAATCATTCACCACAGCGCCCGGCCCAATCCCAGGAAGTGGTTGGCGCTGGAGCAGGAACAGTAACAGCTGCTGGCAACAGTGGCAGCGAAAGCGGTGGCAAGCATGAGTTGAACTCCGCTATTATATGCGGCTGTGGCTCACCGCAAAGCTCGCCCGCCTCAACGGAATTTGAACTGAAGGACAGTGCCACCAATAgaaatgcagctgcaactgacaAAACCATTGCTGCATCTGGCAACGAGGCTTATGCCCAGGCGCCACGCtctgagctgcagcagcaggcgagCGTTGTCGAAGCGGCCAAAATTGAGCCAAGCTCATCCAGTGGTGCATCACATGCCGAGGATCACAAATTTCAGTACATTTTGGCAGCGGCCACCTCAATTGCGACAAAGAACAACGAGGAGACTTTGACCTATCTGAATCAGGGCCAAAGCTATGAGatcaaattgaagaaaattgGTGATTTATCATTCTATCGCGATAAGATTTTGAAGAGCGTTATCAAAATCTGTTTCCACGAGCGTCGATTGCAGTTCATGGAACGCGAACAGATGCAACAATGGCAAGCATCGCGTCCTGGTGAACGCATCATTGAGGTGGATGTGCCATTATCGTATGGTTTGTGCCACGTGTCGCAGCCGTTGAGTTCGAGTGCATTGAACACGGTGGAGATCTTTTGGGATCCATTCAAGGAGGTCGGCGTCTACGTCAAGGtcaattgcatttcaacaGAGTTCACACCAAAGAAGCACGGTGGTGAAAAGGGTGTTCCGTTTCGTCTACAAATTGAAACCTATATAGAAAACTCACCAgcaaatagcagcaacagtaacagtaacagcagcagcagcagcagcggcagctgtgCCAGTGTCAataacaacgccaacaacaacactagcAATACAACAactgtcaacaacaacaacacattagGTGGCACATCGGACAGTCGTGCCGCACTCAATGGCAAACAGGCGGTGCATGCAGCTGCTTGTCAGATTAAGGTCTTCAAACTAAAAGGCGCCGATCGCAAGCACAAGCAGGATCGGGAAAAAATACAGAAGCGGCCAACATCTGAGCAGGATAAATTCCAGCCCAGCTACGAATGCACCATAATGAATGATATATCATTGGACCTGATAACGCCAACCACCACAACAGGCTGCTACAGTCCCGAGTATATGAAACTGTGGCCGAATTCGCCGGTGCATGTACCAAAATACGATGGAATGCTTCCATTTGCGAGCAGCGCATCACCAGCGGCCAGCAGCAGTCCCATTGCGATCAATTCAGTGACATCAACCAATTCGCCAACATTGAAACTAATGGATGCCACAAATATGGTATCGCCGCCACATGTGCCAGCAGACATGGACGACTATAACCAGAACATAATGCCGGACTCAACGCCGGCACAAGTGACGCAATGGCTGACCAATCATCGTCTGACGGCCTACTTAGCCACATTTACTCATTTCTCGGGCGCGGACATTATGCGCATGTCCAAGGAGGATCTTATACAAATCTGTGGACTTGCCGATGGCATACGTATGTTCAATATTTTACGCGCCAAAACGATTGCCCCACGTCTGACTCTCTATGCGAGCATGGATGGCTACAGCTACAATGCGATCTACTTGCTCTCTAACACGGCCAAGGAGTTGCAGCAGAAGCTGTACAAGTTGCCGGGCTTTTACGAGTTCATGGCGAAGGGCGGATCTGGTGGCGCCTTGGAGAATGGCGGTGTTgcagctgcggctgcagctgctgcggcgcTCTACAACAATTGGGGCATGCATTCAAAATACTCCGGCAGCGGCTCGAACATATTCAGTGAGGTTAACAAGAGTTGCGTGTATATTTCGGGTCCTTCGGGCATTCTTGTCAGCGTCACCGACGAGGTGCTCAACAATGAGATCAAGGATGGCAGTCTCTATTCCCTGGATGTGCAGGGCGGCAAAGTTGTCTTGAAATTTATCAATAAGCAGGATAACAATTAA
Protein Sequence
MALSFLSQSSGLLDLKSIFDPQYSLQQHQQENQHQQHQQQQQQQLYLPSQQQHQQQHYQISHISTKFDLSIFNEFDQMEFNNNLSRNHNQYQNNNNNNNNNNDNNSSINNNNNQNNNNGEHLNQVQNRHFMSGYHHQHIGSDYEQVINFVDSPPTSEESWTDTQSKDSPGPHIIDVRTIYSESGSRKRRMDWDSLDIGQSENSPTTQSGDIPNKLPHLEKDKHKREKHSGRSSWSDDIGFDLNADFNSNSYLNNENFLAFSPSLTALKQEPQTEQLKPTTKLPLDSSSAGAVHNIGKIDKSPLGDANHSPQRPAQSQEVVGAGAGTVTAAGNSGSESGGKHELNSAIICGCGSPQSSPASTEFELKDSATNRNAAATDKTIAASGNEAYAQAPRSELQQQASVVEAAKIEPSSSSGASHAEDHKFQYILAAATSIATKNNEETLTYLNQGQSYEIKLKKIGDLSFYRDKILKSVIKICFHERRLQFMEREQMQQWQASRPGERIIEVDVPLSYGLCHVSQPLSSSALNTVEIFWDPFKEVGVYVKVNCISTEFTPKKHGGEKGVPFRLQIETYIENSPANSSNSNSNSSSSSSGSCASVNNNANNNTSNTTTVNNNNTLGGTSDSRAALNGKQAVHAAACQIKVFKLKGADRKHKQDREKIQKRPTSEQDKFQPSYECTIMNDISLDLITPTTTTGCYSPEYMKLWPNSPVHVPKYDGMLPFASSASPAASSSPIAINSVTSTNSPTLKLMDATNMVSPPHVPADMDDYNQNIMPDSTPAQVTQWLTNHRLTAYLATFTHFSGADIMRMSKEDLIQICGLADGIRMFNILRAKTIAPRLTLYASMDGYSYNAIYLLSNTAKELQQKLYKLPGFYEFMAKGGSGGALENGGVAAAAAAAAALYNNWGMHSKYSGSGSNIFSEVNKSCVYISGPSGILVSVTDEVLNNEIKDGSLYSLDVQGGKVVLKFINKQDNN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00497147;
90% Identity
iTF_00576108;
80% Identity
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