Basic Information

Insect: Drosophila cracens
Gene Symbol: -
Assembly: GCA_035042505.1
Location: JAWNLF010000155.1:569148-599103[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 7.3 4.9e+02 1.5 0.3 3 23 1271 1294 1269 1294 0.79

2 9 0.019 1.3 9.6 2.2 1 23 1300 1323 1300 1323 0.96

3 9 0.003 0.2 12.2 0.5 1 23 1328 1351 1328 1351 0.97

4 9 0.00038 0.026 15.0 0.5 1 23 1564 1587 1564 1587 0.97

5 9 0.0031 0.21 12.1 0.8 2 23 1596 1617 1595 1617 0.97

6 9 0.073 4.9 7.8 0.3 1 23 1624 1647 1624 1647 0.96

7 9 1.9e-05 0.0013 19.1 1.4 1 23 1653 1675 1653 1675 0.97

8 9 9.5e-06 0.00064 20.0 0.4 1 23 1680 1702 1680 1702 0.99

9 9 0.0014 0.095 13.2 4.2 1 23 1708 1730 1708 1730 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	7.3	4.9e+02	1.5	0.3	3	23	1271	1294	1269	1294	0.79
2	9	0.019	1.3	9.6	2.2	1	23	1300	1323	1300	1323	0.96
3	9	0.003	0.2	12.2	0.5	1	23	1328	1351	1328	1351	0.97
4	9	0.00038	0.026	15.0	0.5	1	23	1564	1587	1564	1587	0.97
5	9	0.0031	0.21	12.1	0.8	2	23	1596	1617	1595	1617	0.97
6	9	0.073	4.9	7.8	0.3	1	23	1624	1647	1624	1647	0.96
7	9	1.9e-05	0.0013	19.1	1.4	1	23	1653	1675	1653	1675	0.97
8	9	9.5e-06	0.00064	20.0	0.4	1	23	1680	1702	1680	1702	0.99
9	9	0.0014	0.095	13.2	4.2	1	23	1708	1730	1708	1730	0.99

Sequence Information

Coding Sequence: atgAGTGCCAACAAGCGACgatgttgcaacagcaacaacaacaacgacaacagcaacacagctGATCACGTTGATAAGGATGTGCAGATTGAAGAATGCCAAGGAATGCCAACAATTGATGTGGAACGCTTGTGTCGCTGCTGTGGCAAAGGCGGCATGGAATTGCTCAAATTGTTCGAGGAGAGCCCTGCGACAGCCAATCAGAAGACACAAACTGAATTTGCGACTGCGCAAATCCGCCGACgtaaaacgacaacaacaggcGAAACAGAGAGAATAgctcaaaaacaacaacgtcaGCAACAGCGCAAAAGTGATAATCCCGTGGAATATGCGCTGAGTGGAGCACACAGCAGCATGGACATTGTGCTAGAGGAGCTGGTCTCTTGGAAGCTCAATATCGCACGTGACGATGGTCTGCCTCAGGAGATTTGTCGCCAGTGCAAGGCGCAATTCGTAATGGTTGCGAAATTTCGGCGGCGATGTGTTCGAGTCCAGCACCGACTACACGACTACGTCCAGGACATGATCGAGCGCAAGTCACAGAGGGAGGAGGAGCCCACACAGCAGTCACAGAGGGAGGAGGAGCACACACAGCAGTCACAgatggaggaggaggacaCAAAGCAGTCACAGAGGGAGGAGGAGCACACACAGCAGTCACAgatggaggaggaggacaCACAGCAGTCACAGAGGGAGGAGGAGCTCACACAGCAGTCACAGATGGTGGAGGAGGACACACAGCAGTCACAGAGGGAGGAGGAGCACACACAGCAGTCacaggtggaggaggaggacatACAGCAGTCACAgatggaggaggaggacaCACAGCAGTCACAGAGGGAGGAGGAGCACACACAGCAGTCacaggtggaggaggaggacacACAGCAGTCACAGAGAAAGCCACAGCTAAATGAGGCGTCCGCGGCAGATTACGTTCATCTGCCACAGTCACAAATGGAGCGGAAACGTTGCTTGGTGCCAAACACGGAGTCGTCGCCGCAGCCAAAATATGTCAAGACTGATGCCACACAGCTGCTGACGCCTCCCAAGCGCAATATGCGCATTGTCTCCTTGCCAGCCAGTAAAATTGAGACTacaacggaaacggaagcggGCAGGATAGCCACAGAAGCGACCATCGACTGTCGACTGACTGAGACGAGGCAGCGAACACCGCAGAGATCGCCATACAAAGCGAGACTTATTCACGTGCCATGGAAAACGAAAGCGGCACGCAAACAGATCTCGGACTCGCGGTCCACTGTCTATGCAGGCTCCCTCTGGCGAGCGGGCTCCATGCCACCGGAGCATACCAAAGAGCTGGAGTCAGCTAATGCAATGACTAGTTTAACGAAAATTGTAGCCGAAGCTAGTCGAAAATCATCGGAGGATTTGAGTGACTTGTCGGTGAATGCATGTCAAGGCTTCGACATCGAGGgcagcagctccaactccTCCACAATAGTTGGcccaaagccaacaacaaatgcgacGCTCAGGTTCCCACCAAAACGCTGTTCGCCCAATAAAACTCGGGTTTTGCGGCGACAAATGCACAGACCCAACTATGCGCCGGTCAAAAGGACGAGGCGCGTTTTCAAGAAGGCAAAGGCGACAAGTGAAGCACCCATCGATGAGCAGTGCTGCAAAGCAACGGAGGAAACGGAGGAAGTTGACAAAATGCCAAATAGCTCTGCGAATGAGGAGCCgtccaccagcagcagcagcagcagccgcaacagagCGCCAGTCAAAGAGCAAGAGAGTAATATCATTGAGAAAACAGAGAATGGGATGCCAAAAACAGAGTCAAGTGCGCAGCAGGAAGATCCGCAAAACAGCTCGCCAGCAAGCCAAAGCGAAAATACAGAGGAAGAGCTGCAGCCTGAAGAAGCAACCCAATCTTCGCCAGAAACTTTAGGCAAAGATGCTCAGGACAACATGTTGATGGAACAAATGGAAAGCATATCAGAAGGAGTGATTAAGGCAAATGGGGCAGTAAATGGAACAGTAGAGACAACGTTTATGAGTCCTGTGCAGCTTGAGGAATTAAGCTCTTCCAGCACGGATCacatggagagagagagacggcaATCAGTAACGCCCGAAGTGCCAGCCGCAGAGTGCGAGGTAGAAGTAAGCCTAACAAGTGAGGAGGAAATGACGGACCTGATGTCGGAGGAAATGTCGGAGCTTTTAGTCAGCATACCGCTAGATGCGCTTGGCGAGGATTTACAGCGTAAGCTATGCAACGAGTCGGATTTAGTCGACGAGTTGGAGCAACCAGATGGAGAACCCAAGGAGCCAGCGGAAGCGGACGATGTGAATAACAATGAGAATGGTGAGAATTTTTGCCAGAGTGCTACAGCAGATAGCTTCAATGCTGCTGTAGCACTCGcaaccaaacaaattgaagcagAACCCAACGGAgtaggcggcggcggcggcgatgatgatgatatggAGTCACTGGAGAAACTACCTAATCTCCAgaacgagcagcaacagcagcagcagccaccacgCGCTTCTGCCAATGCCAGTTCCATGGATTTTTTGGCTGAATTCGAGAAGCATTGCGAAAAGTCGCTCAAGCTGCAGGCAGCTGGGCAGGCGGAGCTGGCGGAGGCTAAGCAACAGTTGGCGGTGAAAATGAACGATGTGGAGAACACACTGCACGGCATACTCAATGAGATGCAGGATGAGCATCTCTATATGCCCGTCTGCACGCCCATCGATGAGTTCCTCACGCCCGCTGATTATGCGCCGCCAACGCCAGCATCGCCCAATCTCTATGAGCAGCCAGCGGAGCCACAGcagccactgcagcagcagcagcaacaacagcagccactgcagcagcagcagcaacaacagaaggaGGGGAATCTCTTTGATAGCAGCACTTTTAGTAATGAGCTGATTGGCTTTCAAAATGATATGCCCTGCTTTGAGAATATAGCGACTACGCCGGAAGAGCAGAgcctgcagctggagctgacGCAGTTCCTTAATGAGCTGCAGccggcacaacaacaacaacagcagcagccagcacaacaacagcagcagcaacagttgcagctgcagcaggagacTGTCAGGTATGAGACACTATATCAAACAGCACCGCTTCCTgtcgccaacaacaacaacaacaacaaattgcaggtCATACAAATGACGCCACAAGAGACGCTGTGGCAGGCACAGACtgcacagcagcaagagcagccacagcagcagccgcaggcgacagcagcaacacaactGCAATGGTCCACTGTGGGCGGCTTGGAGGCGATCAAGACGACGCCCAGTCTCGATAATCTgcacagcagtagcagcaacaacaacaacaacaacacaaccacctccaccacaaccaccacctACTACATTAATGCCAGTGATCTCTAtcaaacacaacagcagcagcagcaacagtctaGCGAGACTTATGCTCTGCTAGACAGCAATGATAACTATGTgctggaacagcagcagcagcagccacaacaccagcagcaccagcccATTATGATACTCATACAGCAGccggagctgcagcagccagtgGCTTCAGCCAGCAATCCGCAGCAGGCGCCGCTCCATGTAAACTACAGCAATGAGCTTCAAGCttatcaacagcaacatcagcaacatccacaacaaccacatcaacCACTTCCACATCCAAAACCACAAGcacatccacaacaacaagtacaaaatACAGTATTAGGCTTACCGGGAGCGGTGCCGCAGCCCACTCGCGGTCGCCCGTCCATGTTAAAGTGCCGCTTCTGCCAGAATGGACCGCGCTTCTCGAGCAATGTGGAGTACAGTCGCCACATCATTGAGCTGCATCCCGCCGTCGCGCCATTCAACTGTCCGCACTGCCCGCTCGCCTTTGCCGGCCGCAGCAAGCGCAACCAGCACATCCTCAGTTGCCACGTGGTGCAGCAGTTTCAATGTGGCCAGTGCTCGCAAATGTTTCCCTCGCAGCGTGCActcgatttgcatttgcagcgaTTTCACATGCCACTCGCCACGGAGCCGACATCCCCATCGAgtggcacagcagcagcagcagctggtgtGCGTCTAGAAGAGGTTCAACTGCGCATTGCCACCACCAATgatctgcagcagcaacagcagcggcagcggcaaccACTTCAGCAGCAATCAGCTCCACATATGCGGGCCTTGGAATTGCAGACAAGTCCATCCCGACCACGCAGGACGCGCATACTGTGCTGCCCGGACTGCGAGGACTGCACTTCGGCCAGTGGACACAGTCAGTGCAGCGTGCAGCCGTTCGAGGAGCTGAACACTTTGCAACCACCGCCCACGGTGCTGACGCCGCCGTCAACAATTGCATCGCTGCCGTCGCCGCAGCCGGCGCCGCATATAACCCTACCATCACCGGAGCAATCGGAGCCGGATTCGACGACGGCAACATTGCGGCAGTTCCGCAAACGTTGCACAGTCAACAATAGCTCGACAACAGCGGCGTCGGCTGCAGTGGCAGccgctacagcagcagcagcagtagcaccaacaacaacaatgctaaCAAACGCTGCCTCGCCATCGCCGTCGTCATCGCCATCATCGTCGACCATGGAGACAACAAGCGCCACACTGCAACTGGGCAAACTGCGTGGCAGCCATCAGTGTGTCATCTGCGAGGAGCGTTTCACCAACATTATTGCGCTGCGCAAGCATCAGCAAATGGCCCACGATTCACAGACGACGATGCCGTGGGTCTGTTCGATCTGTAAGCGAGGCTATCGGAAGCGCACCGACATGGATAACCATATGAAATCGCACGAGCCGAAGGGTCGACCCTATGAGTGCAGCGAGTGCTGGGTGCGCTTTCCGGAATTCAAGCAGCTGGCGATGCACAAGTTCACCGTGCACGAACTGATCAAGCCGCACACCTGCGATGAGTGTGGTAAACAATTTGGTACGGAGAGCGCCTTGAAGACGCACATTAAGTTTCACGGTGTGCGAGGCTTCGAGTGCGATGAATGCGATGAGGCATTCGCCTACATCAAAGATTTGCGCAAACATCGCCGAACCCACAACAGCGAACTATTTTACAAATGCGACTACTGTCCGCGCACGTTTCTACATTTTACGAGCTATCGTGCACATATGAACACCCACCTGCCGCTGGGTGTATTCCTTAACGACAAGATGCCCAGCAGCGTATGCAGCAAGTCGGAGAATCCATCAAACACTGAAGAATCGCTGCTGCCATTGACGCCGCTGAGCAACTGCAATGgaaacagtggcagcaacagcggatTAGAGGACTGTCCCGGCTCTGTGGAGATGGTGGTGGAGAGCAGCATGGCGGCGCCATCGTTGGACATGATTGTGGATACGCCATAA
Protein Sequence: MSANKRRCCNSNNNNDNSNTADHVDKDVQIEECQGMPTIDVERLCRCCGKGGMELLKLFEESPATANQKTQTEFATAQIRRRKTTTTGETERIAQKQQRQQQRKSDNPVEYALSGAHSSMDIVLEELVSWKLNIARDDGLPQEICRQCKAQFVMVAKFRRRCVRVQHRLHDYVQDMIERKSQREEEPTQQSQREEEHTQQSQMEEEDTKQSQREEEHTQQSQMEEEDTQQSQREEELTQQSQMVEEDTQQSQREEEHTQQSQVEEEDIQQSQMEEEDTQQSQREEEHTQQSQVEEEDTQQSQRKPQLNEASAADYVHLPQSQMERKRCLVPNTESSPQPKYVKTDATQLLTPPKRNMRIVSLPASKIETTTETEAGRIATEATIDCRLTETRQRTPQRSPYKARLIHVPWKTKAARKQISDSRSTVYAGSLWRAGSMPPEHTKELESANAMTSLTKIVAEASRKSSEDLSDLSVNACQGFDIEGSSSNSSTIVGPKPTTNATLRFPPKRCSPNKTRVLRRQMHRPNYAPVKRTRRVFKKAKATSEAPIDEQCCKATEETEEVDKMPNSSANEEPSTSSSSSSRNRAPVKEQESNIIEKTENGMPKTESSAQQEDPQNSSPASQSENTEEELQPEEATQSSPETLGKDAQDNMLMEQMESISEGVIKANGAVNGTVETTFMSPVQLEELSSSSTDHMERERRQSVTPEVPAAECEVEVSLTSEEEMTDLMSEEMSELLVSIPLDALGEDLQRKLCNESDLVDELEQPDGEPKEPAEADDVNNNENGENFCQSATADSFNAAVALATKQIEAEPNGVGGGGGDDDDMESLEKLPNLQNEQQQQQQPPRASANASSMDFLAEFEKHCEKSLKLQAAGQAELAEAKQQLAVKMNDVENTLHGILNEMQDEHLYMPVCTPIDEFLTPADYAPPTPASPNLYEQPAEPQQPLQQQQQQQQPLQQQQQQQKEGNLFDSSTFSNELIGFQNDMPCFENIATTPEEQSLQLELTQFLNELQPAQQQQQQQPAQQQQQQQLQLQQETVRYETLYQTAPLPVANNNNNNKLQVIQMTPQETLWQAQTAQQQEQPQQQPQATAATQLQWSTVGGLEAIKTTPSLDNLHSSSSNNNNNNTTTSTTTTTYYINASDLYQTQQQQQQQSSETYALLDSNDNYVLEQQQQQPQHQQHQPIMILIQQPELQQPVASASNPQQAPLHVNYSNELQAYQQQHQQHPQQPHQPLPHPKPQAHPQQQVQNTVLGLPGAVPQPTRGRPSMLKCRFCQNGPRFSSNVEYSRHIIELHPAVAPFNCPHCPLAFAGRSKRNQHILSCHVVQQFQCGQCSQMFPSQRALDLHLQRFHMPLATEPTSPSSGTAAAAAGVRLEEVQLRIATTNDLQQQQQRQRQPLQQQSAPHMRALELQTSPSRPRRTRILCCPDCEDCTSASGHSQCSVQPFEELNTLQPPPTVLTPPSTIASLPSPQPAPHITLPSPEQSEPDSTTATLRQFRKRCTVNNSSTTAASAAVAAATAAAAVAPTTTMLTNAASPSPSSSPSSSTMETTSATLQLGKLRGSHQCVICEERFTNIIALRKHQQMAHDSQTTMPWVCSICKRGYRKRTDMDNHMKSHEPKGRPYECSECWVRFPEFKQLAMHKFTVHELIKPHTCDECGKQFGTESALKTHIKFHGVRGFECDECDEAFAYIKDLRKHRRTHNSELFYKCDYCPRTFLHFTSYRAHMNTHLPLGVFLNDKMPSSVCSKSENPSNTEESLLPLTPLSNCNGNSGSNSGLEDCPGSVEMVVESSMAAPSLDMIVDTP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00528332;
90% Identity: iTF_00567090;
80% Identity: -