Basic Information

Insect: Drosophila cracens
Gene Symbol: -
Assembly: GCA_035042505.1
Location: JAWNLF010000640.1:1672394-1674890[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.026 1.8 9.2 3.8 1 23 262 284 262 284 0.98

2 11 1e-05 0.00067 20.0 0.5 1 23 290 312 290 312 0.99

3 11 0.0002 0.014 15.8 2.5 1 23 318 341 318 341 0.97

4 11 0.37 25 5.6 3.8 1 20 347 366 347 369 0.95

5 11 0.009 0.61 10.7 1.7 1 23 375 397 375 397 0.97

6 11 4.2e-05 0.0028 18.0 1.2 1 23 403 425 403 425 0.98

7 11 0.00014 0.0094 16.4 1.2 1 23 433 456 433 456 0.96

8 11 0.0021 0.14 12.7 0.4 2 23 463 484 462 484 0.97

9 11 0.0019 0.13 12.8 1.2 1 23 490 512 490 512 0.98

10 11 1.9e-05 0.0013 19.0 1.3 1 23 518 541 518 541 0.96

11 11 4.1e-07 2.8e-05 24.3 3.3 1 23 555 577 555 577 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.026	1.8	9.2	3.8	1	23	262	284	262	284	0.98
2	11	1e-05	0.00067	20.0	0.5	1	23	290	312	290	312	0.99
3	11	0.0002	0.014	15.8	2.5	1	23	318	341	318	341	0.97
4	11	0.37	25	5.6	3.8	1	20	347	366	347	369	0.95
5	11	0.009	0.61	10.7	1.7	1	23	375	397	375	397	0.97
6	11	4.2e-05	0.0028	18.0	1.2	1	23	403	425	403	425	0.98
7	11	0.00014	0.0094	16.4	1.2	1	23	433	456	433	456	0.96
8	11	0.0021	0.14	12.7	0.4	2	23	463	484	462	484	0.97
9	11	0.0019	0.13	12.8	1.2	1	23	490	512	490	512	0.98
10	11	1.9e-05	0.0013	19.0	1.3	1	23	518	541	518	541	0.96
11	11	4.1e-07	2.8e-05	24.3	3.3	1	23	555	577	555	577	0.97

Sequence Information

Coding Sequence: ATGTCAAAACGCACGCGCGAGGTCGATTCAGAGGATTTGCAGTCCTTTTTAGCCAATTTTCACGAGGATTTAGAAGCGGGCAACGCTGATGCCAACGATGCCAAGCCAAATGCCGCCTTCAAAAGAGGACAAGAAGAACGCCTGGACGAAGAAGAGGACGATGtagatgatgaagatgatgacgatgatgacaaGTACTTTATTGACGACGAAGGCAACTGTTATATCAAAACTACGCccaagaagcagcaacagattaaaaagaaactaaaacCACAAACAACCTCTTCTGTTGCAATACGCAGCGCTAGCCGTGCAACTCCCAAAGCTATCAACCTGCGTCCAGCCAAGCCCAAAGCGGAGCAGTCACCACAGAAAACACCCAAAGCAATTAGCATACGTCCGGCTACACCAAAAAGGGCCCCCAACAAGCAGACTTCACCAGCAGCAGTTAGCGCGCCCCGAGCTTATTTACGTTCCGCAAAAGGCAAAGCCAATCGACCGCAGTCGGAGACGATAAACAAAGTGGTGATAGAGAAAGTGGAGGATATTGAGGAGCTTGCAGATGATCCGAGCGAAGCCAATGTGAGCACGTGTTCTATTGATATGCCGGAAACAAGTGTCGATCTCAGCGCaagcaaagacaacaactCCGATGATGAGGTCTACGAATTTGATGACAATGCGGCAAATGTCTCCACCCGATCGGATGTGGACTTTGTGCTAAGCGGTAACCAATACAAGCTGAAGCCAATGGCAGCCAATGCGACTGCAGCGCAAAAATATGCCTGCTCCCATTGCAGCTATACGACCAGCAAGAAATTCCTAATCTCACGGCATGTGCGCTCCCACGACGCTGAACTTTCTTACAAGTGTTCGATTTGTGAACGCGGCTTCAAGTCCAACATGGGTCTGGTGAATCACCTGAACACGCACATGGGCAACAAGCCGCATAAATGCAAGCTCTGCGAGAGCGCCTTCACCACCAGTGGCGAACTGATACGCCATACACGCTACAAGCACACCAAGGAGAAGCCGCACAAGTGTACCGAGTGCAGCTACGCCAGCGTCGAATTAACCAAGCTGCGTCGTCACATGACTTGCCACACGGGCGAACGTCCGTATCAGTGTCCGCACTGCACATACGCCTCGCAGGATATGTTCAAGCTGAAGCGGCACCTGGTCATCCATACGGGCGAGAAGAAATACCAATGCGACATCTGCAAGTCACGCTTCACCCAATCCAACTCGCTCAAGGCACATAAGCTGATCCACAGCGTGGTGGACAAGCCCGTCTTTCAGTGCACTCTTTGTCCCACGACATGCGGCCGCAAAGCGGACCTCCGCACCCACATGGCCAACATGCACACCTCAGAAAAGCCGCTCGTCTGCAAACGTTGCGGCCAGGAGCTGCCCGATCGCTATCAGTACAAGCTGCACATTAAATCGCACGAGGGCGAGAAATGCTATCGATGCAGTCTCTGCAGCTATGCGTCGGTATCTCAGCGGCATCTTGACTCGCACATGCTGATACACACCGACTCCAAGCCCTACAAGTGTGATCTGTGCTCCCAGACGTTCCGGCAACGTCAGCTGCTGCGTCGTCATGTGAATCTAATCCATAACGAGGACTATAAGGCGCCGGAGCCACGCGAGAAGATGCACTCCTGTCCCAGCTGCGATCGCGTCTTCACCCACAAGGGTAATCTGATGCGGCACATGGAGACACACGATGATACATTGAATGCGCGCGAAGAGAAACTAAAACTCAAATTGGGGCGTAATGTGCGCTTGCAGCCGGACGGTACAATTGTGACTTTGGTCAATGGCAACGATATCGATTCGCTGGACAAAAACGATGGCGCTTCGATTGACATCGATGAGCAGTATGAGCTTACTGAGATCCAGGAAATCGAAGATGAGGACGAGGTGTCGGATGCGGAGGTAGTGGCGAACAAAGTTATGATGGAGATGATTGCCACTAAAGCTAACCTTAGAACGAGAAGCGGTAAAAGAGATCGCGAGCAGAGCTCGTCCAGCAAGCCCATCATTATTAATCGGCAATTGAAAATACCCCGGGTGCATCGCGAGCTGAAAACTCAGGGCGGCACTTTCCGCATTAAGGAGGAGCTGGAAGCCAATGAGTTCACCGTGGAGCTGCAGGGTGACGATGATCAGTTTATCGTGCAGTTGGTCAACGATGACAGCGAAGTTGTGGTCAAACGTGAGCCCAAAATCAATGCCAGTAACTGTTTTGGGTTCGAGgatgatgctgatgcagaaTATGATGAGTATGTTGAACCCGTGGCGGAAGTGGATGCCACATCACAGGAGTTTCTGCAGCTAATGGACATGATTGAGCAGGATGCGGACAATTGA
Protein Sequence: MSKRTREVDSEDLQSFLANFHEDLEAGNADANDAKPNAAFKRGQEERLDEEEDDVDDEDDDDDDKYFIDDEGNCYIKTTPKKQQQIKKKLKPQTTSSVAIRSASRATPKAINLRPAKPKAEQSPQKTPKAISIRPATPKRAPNKQTSPAAVSAPRAYLRSAKGKANRPQSETINKVVIEKVEDIEELADDPSEANVSTCSIDMPETSVDLSASKDNNSDDEVYEFDDNAANVSTRSDVDFVLSGNQYKLKPMAANATAAQKYACSHCSYTTSKKFLISRHVRSHDAELSYKCSICERGFKSNMGLVNHLNTHMGNKPHKCKLCESAFTTSGELIRHTRYKHTKEKPHKCTECSYASVELTKLRRHMTCHTGERPYQCPHCTYASQDMFKLKRHLVIHTGEKKYQCDICKSRFTQSNSLKAHKLIHSVVDKPVFQCTLCPTTCGRKADLRTHMANMHTSEKPLVCKRCGQELPDRYQYKLHIKSHEGEKCYRCSLCSYASVSQRHLDSHMLIHTDSKPYKCDLCSQTFRQRQLLRRHVNLIHNEDYKAPEPREKMHSCPSCDRVFTHKGNLMRHMETHDDTLNAREEKLKLKLGRNVRLQPDGTIVTLVNGNDIDSLDKNDGASIDIDEQYELTEIQEIEDEDEVSDAEVVANKVMMEMIATKANLRTRSGKRDREQSSSSKPIIINRQLKIPRVHRELKTQGGTFRIKEELEANEFTVELQGDDDQFIVQLVNDDSEVVVKREPKINASNCFGFEDDADAEYDEYVEPVAEVDATSQEFLQLMDMIEQDADN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00525327;
90% Identity: iTF_00574224;
80% Identity: -