Basic Information

Insect: Drosophila cracens
Gene Symbol: -
Assembly: GCA_035042505.1
Location: JAWNLF010000631.1:8338047-8342150[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.0003 0.02 15.3 1.8 1 23 281 303 281 303 0.99

2 8 2.2e-06 0.00015 22.1 0.8 1 23 308 330 308 330 0.98

3 8 1.1e-07 7.2e-06 26.2 0.2 2 23 339 360 339 360 0.97

4 8 6.4e-07 4.3e-05 23.7 0.3 1 23 366 388 366 388 0.98

5 8 7.9e-08 5.3e-06 26.6 3.9 1 23 394 416 394 416 0.98

6 8 2.9e-07 2e-05 24.8 1.9 1 23 422 444 422 444 0.98

7 8 6.4e-06 0.00043 20.6 5.1 1 23 450 472 450 472 0.98

8 8 0.00021 0.014 15.8 0.5 1 21 478 500 478 501 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.0003	0.02	15.3	1.8	1	23	281	303	281	303	0.99
2	8	2.2e-06	0.00015	22.1	0.8	1	23	308	330	308	330	0.98
3	8	1.1e-07	7.2e-06	26.2	0.2	2	23	339	360	339	360	0.97
4	8	6.4e-07	4.3e-05	23.7	0.3	1	23	366	388	366	388	0.98
5	8	7.9e-08	5.3e-06	26.6	3.9	1	23	394	416	394	416	0.98
6	8	2.9e-07	2e-05	24.8	1.9	1	23	422	444	422	444	0.98
7	8	6.4e-06	0.00043	20.6	5.1	1	23	450	472	450	472	0.98
8	8	0.00021	0.014	15.8	0.5	1	21	478	500	478	501	0.94

Sequence Information

Coding Sequence: ATGAACAACGCACCCGCAACGCacaccacaacagcaactcgaagaagaagcagcagcggcatggGCTTTAAGCATGCGATGCTGCAACGCAGCTACGATCTCGCCGCATCTCCTGCCCCAGCAGAGGCGCCCCAGCAAGTTACGGATTTTAGCATCAGTCGCATTCTGGGCAACGTTGGCAAGGATAATCCAGCCAAGAAGAAGACAACGgcgagtgctgctgctggcaacattCTCGATCTCTCGAagagcagtcagcagcagcaggcagtgCCGCCCTTgcagacagcaacagccaatTATGGCTATGCCATGTTGCCACCGGATTTGCTGGCCATGGCCAGTGCAACCAAATTCTATGCACAGTTCTTTCCACACTTGCTGCCTGCCtatgcggcagcagcagctgccgccggcTTCACAACGCCACCCACCTCGCCCTatcagcaacaccagcagcaacagcagcagcatcagcagcagaagcgtTACTTTGCCCCCTATGTGATCAATGGTCAGAGTCCGACACGGGCCAAGCCTAGTACACCCAGTGTCTGCACCCGCGCGGATTGCGTGGAATGCCTGGACTACTATAGACAATTTGGAGCGGGCTACAAGCCGACGCCATTGATTTCGCCGGCGCCTTCATCGGTCAGCAGTGCAAGCAGCTCGAGGCTCGGCCGGGCAGACAGCGGCGCCACCAACATCTCATTCACCACGGTGACCAACCTCAATCTGAgcacgacagcaacaacaacaatgacaacagcaacaacaacaccagcattGCCCAATTtagttgccaacaacaacaacaccgcGACAGCTGAGGAGATCAGCTACAAGTGTCGCATCTGCGACAAGGTTTTTGGATGCTCCGAAACACTGCAGGCGCACGAGAAGACGCACAAATCGCCGCGGTACGAGTGCTCGGATTGTGGCAAAGGATTCTCGCAGCTGCGCAACTATAAATATCATCTGTCCGTGCATCGTGGCACGAAAGAGTTTGCTGCAGAGTGTCCTGAGTGCGGCAAGACCTTCAACGACAAGGGCTATCTGAGCAGTCACATGAAGATCCATCGCAACCGGAAGGAGTACGAGTGTCCATACTGCCCCAAGTCCTTCAATCAGCGTGTCGCCTTCAACATGCACGTGCGCATCCACACGGGCGTCAAGCCACACAAGTGTGCCGAATGCGGCAAGCGATTCTCCCGCAAGATGCTGCTTAAGCAGCACATGCGCACGCACAGCGGGGAGAAGCCGTATCAGTGCTCCGTTTGTGGCAAGTCCTTTGCGGATCGCAGCAATATGACGCTCCATCATCGGCTGCACTCGGGCATCAAGCCATTTAGCTGCCCTCTGTGCCCCAAGGCATTCACCAAGAAGCATCACCTGAAGACGCATCTCAATTATCACACTGGCTGCAAGCCCTACGTCTGCCCACATCCCAACTGCAACCAGGCCTTTACCCAGTCCAGCAATATGCGCACCCACGCCAAGAAGTGCCAATACAGACCGCTAGATGGCGCTCAGCCATTCCCCATGCctcacaagcagcagcagcagctgcagcaaccacaacagcagcagcaatcgctggcgctgccagcagctgcaagttTTGTCATGCCACCGGCAGCAtttgccactgctgcagcCTCATCCCCCTTTCCGCCGACCCAGCAAACGCTCCTCAGCAATTTGAGAACATTCCAAGCGATCTGA
Protein Sequence: MNNAPATHTTTATRRRSSSGMGFKHAMLQRSYDLAASPAPAEAPQQVTDFSISRILGNVGKDNPAKKKTTASAAAGNILDLSKSSQQQQAVPPLQTATANYGYAMLPPDLLAMASATKFYAQFFPHLLPAYAAAAAAAGFTTPPTSPYQQHQQQQQQHQQQKRYFAPYVINGQSPTRAKPSTPSVCTRADCVECLDYYRQFGAGYKPTPLISPAPSSVSSASSSRLGRADSGATNISFTTVTNLNLSTTATTTMTTATTTPALPNLVANNNNTATAEEISYKCRICDKVFGCSETLQAHEKTHKSPRYECSDCGKGFSQLRNYKYHLSVHRGTKEFAAECPECGKTFNDKGYLSSHMKIHRNRKEYECPYCPKSFNQRVAFNMHVRIHTGVKPHKCAECGKRFSRKMLLKQHMRTHSGEKPYQCSVCGKSFADRSNMTLHHRLHSGIKPFSCPLCPKAFTKKHHLKTHLNYHTGCKPYVCPHPNCNQAFTQSSNMRTHAKKCQYRPLDGAQPFPMPHKQQQQLQQPQQQQQSLALPAAASFVMPPAAFATAAASSPFPPTQQTLLSNLRTFQAI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00499718;
90% Identity: iTF_00596074;
80% Identity: -