Basic Information

Gene Symbol
MYB54
Assembly
GCA_035042505.1
Location
JAWNLF010000660.1:6292035-6294335[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 3.6e-12 3.2e-09 36.8 0.1 1 41 236 277 236 282 0.92
2 4 9.3e-05 0.083 13.0 0.0 2 44 292 338 291 340 0.87
3 4 1.5e-08 1.3e-05 25.2 0.0 1 46 346 392 346 392 0.94
4 4 1e-08 8.9e-06 25.7 0.0 2 41 399 439 398 440 0.95

Sequence Information

Coding Sequence
ATGTGCGATGTGAATAGTCTGAAGGAagaataccaacaacaattgcaagaAATAACAACACTGCTGTCTACCACAGCTGAAAGCGATGCAGATCCCTTGAAACTGAATCTGGCCCTGCAGAAGCGTCTCAAACAGATGCGTGAACGTATTCTGGATCTACTGCGGATAGTCCGAGCTCGTTATAAATTTAACGAGGACTTACTTATAAACCGCTTGAAGAAGCGGTCTAGGAACGCAGGAGCAGCGGGCACCGAGGAAGTCGTCGGAATGAGTGGAGCTCTGCTGCGCGGTGGAACGTTTCGATTTAAgggtaatttatattttcgcgATGTGAATGGACGAAGTTGTCCCAACAATGAGGACTACGAGCGGCGCTGCAGCAATGAAATGTTCCCCACCGATTTTGATATGCGCTCCAAGCACGTCTGGACGGTGATGGACAGGAAAAACATCGTGATGGGTATTAAGGAGCAGCTGTTGGATCATGCCGCCTACACAGCGCCAGCAGTCAAAACCGTTGACAGGAAGGGGAGCAAGCGTAAGGCTATCGATCTTCACGAGCAATCGCTGGCTTATTTGCTGAAACTGGCCGACAGCAGCTTCAGCATTGACTGGAATCAGATTAGCACACTCGATCTGCAGCATCGTCATTCATCGTACAGCTGTGAGGCCATGTGGCTAGTGTATTTGCAGCCGCAACTTAAACGCGAGGACTGGAGTGCCGAGGAGGATCAAATTTTGGTAGCTGCCGCCAAGGACCACAAGATGCAAAATTGGGAAGCCATTGCGGCTAAGGTGGATCGGCGGACGGACTATCAGTGCTTTGTGCGCATGCAGACAGCTCTGCGCAATCAAGCGGAGCCAGCGAGCTCCATGAAATGGAGTGATAATGACAACGAACGCTTGCGAGCAATTGTTTTAAAGAATACGGTTAACAGCGTTGTTAACTGGTCTGTAGTGGCAGAACACTTCCCGACCAAATCGCGATCCACAATAATTGGTCGCTATTTGTATTTCCTGCATCCCAGCATCAGTCGCGAACCCTTCACCGAAAAAGAGGATGTGATGCTGTTTGCTGCCGTTGAGGAATTCGATGGCAAGTTTAATTGCATTCCGCGAACGCTCTTCCCCAATCGCTCGACGGCCCAGCTGCGTACGCGCTATAATAATGTGCTGGCGCAGCGACATAAGACTGATCCCTGGTCGGTGAATGATGATATGAAACTGATTGCTTTCGTTGAAAAACATGGCAACTCGCAGTGGGTGAATTGTGCCAATGATTTGGGCAATCACTCGCGCACCAGCTGTCGCACACGCTCTCTAGTCATTCAGCGTTTTATGATGCAGCATCCAAATGCAACGGTGGCGGATATTCCACGTCGTAAGGTGCTGAAAAGTGCTCCAATTACCGCCGGCAATTGGGAGCAACGTCTCCATCAATGGCTAGCCGATCCGGAGTCACTCCAGAATAGCCCACCGGCCTGGAAGTCAGAAACAAAGTCATTACGTAGAAGTGGCACCGCCACCTATGAGTACTTCAAGTATGCCTATAATCTCAATTTACGATCGCCTGCGGCGCCAATACCACTGCCCCTGAACGAACGTAATCTGCGCACCATGGCTAATGCGCTGCGCTTCCATCCACCCGCAAATATGTGCAATATAATCCAAAGTGCTTGTCTACCCAGTCAGCTGTGCCGCCTCTTTAACAAGGTGCTGTGTGAATTGCCTGCGCGCGAAGGAAGTGAATCATCTACGGAGTTGCTGCCGCCGAATTGGTCAACAATGATGGGCTTTCGGGCcatatgcatattttcaaCGCAATGTATCAATGGTGCCGATCCTGCGACTGAATTGAAACCAACAATCAGCTACGATATATCTCAGCCAGCGGTTCAGCTGTTGGGGCAACGCTTACGGACTCTTTTCCTTCGCACTGTCCAGCTGAGCCGACTGAAGACAACGTCGTTCGAGGCGCTGCCGGCTGAATTGATGAAACTGTCACGTCCAACTATATATGTCGACTTGTCAGAGACCCTACCGCAATGCTCACGAAGAATCAAACAGCAGACACGGCCTGGCACAGACCGTAGTGGCCCGACTGTTAAAGAAATGAAATCTGAACCAATTAAACTTGAGGAAGAAATCCAATTACATTCAGATTAA
Protein Sequence
MCDVNSLKEEYQQQLQEITTLLSTTAESDADPLKLNLALQKRLKQMRERILDLLRIVRARYKFNEDLLINRLKKRSRNAGAAGTEEVVGMSGALLRGGTFRFKGNLYFRDVNGRSCPNNEDYERRCSNEMFPTDFDMRSKHVWTVMDRKNIVMGIKEQLLDHAAYTAPAVKTVDRKGSKRKAIDLHEQSLAYLLKLADSSFSIDWNQISTLDLQHRHSSYSCEAMWLVYLQPQLKREDWSAEEDQILVAAAKDHKMQNWEAIAAKVDRRTDYQCFVRMQTALRNQAEPASSMKWSDNDNERLRAIVLKNTVNSVVNWSVVAEHFPTKSRSTIIGRYLYFLHPSISREPFTEKEDVMLFAAVEEFDGKFNCIPRTLFPNRSTAQLRTRYNNVLAQRHKTDPWSVNDDMKLIAFVEKHGNSQWVNCANDLGNHSRTSCRTRSLVIQRFMMQHPNATVADIPRRKVLKSAPITAGNWEQRLHQWLADPESLQNSPPAWKSETKSLRRSGTATYEYFKYAYNLNLRSPAAPIPLPLNERNLRTMANALRFHPPANMCNIIQSACLPSQLCRLFNKVLCELPAREGSESSTELLPPNWSTMMGFRAICIFSTQCINGADPATELKPTISYDISQPAVQLLGQRLRTLFLRTVQLSRLKTTSFEALPAELMKLSRPTIYVDLSETLPQCSRRIKQQTRPGTDRSGPTVKEMKSEPIKLEEEIQLHSD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00527975;
90% Identity
iTF_00482159;
80% Identity
-