Basic Information

Insect: Drosophila colorata
Gene Symbol: -
Assembly: GCA_035041545.1
Location: JAWNLD010000680.1:10173437-10179057[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 26 0.0037 0.24 11.9 2.9 1 23 187 209 187 209 0.97

2 26 0.003 0.19 12.2 2.6 1 23 215 237 215 237 0.98

3 26 0.057 3.7 8.2 0.9 2 23 269 290 268 290 0.96

4 26 0.042 2.7 8.6 2.2 1 23 362 385 362 385 0.93

5 26 2.4 1.5e+02 3.1 4.6 2 23 396 419 395 419 0.93

6 26 3.7 2.4e+02 2.4 0.5 1 21 425 445 425 446 0.88

7 26 1.4 89 3.8 3.8 1 23 461 483 461 483 0.98

8 26 0.00071 0.046 14.2 1.1 1 23 557 580 557 580 0.97

9 26 0.028 1.8 9.1 0.1 3 22 591 610 589 610 0.93

10 26 6.9 4.5e+02 1.6 4.7 1 23 619 642 619 642 0.95

11 26 0.0005 0.032 14.6 0.4 2 23 673 694 672 694 0.97

12 26 1.9e-05 0.0013 19.1 5.6 1 23 702 724 702 724 0.98

13 26 0.031 2 9.0 0.4 1 23 875 898 875 898 0.95

14 26 0.0082 0.53 10.8 1.5 1 22 905 926 905 926 0.96

15 26 0.11 7 7.3 0.4 1 23 935 958 935 958 0.92

16 26 1.5e-05 0.001 19.4 1.2 1 23 983 1005 983 1005 0.97

17 26 0.00014 0.0089 16.4 0.9 1 23 1012 1034 1012 1034 0.98

18 26 0.0038 0.24 11.9 0.0 2 22 1061 1081 1060 1081 0.95

19 26 0.039 2.5 8.7 4.0 1 23 1126 1149 1126 1149 0.96

20 26 0.0071 0.46 11.0 0.4 1 23 1186 1209 1186 1209 0.96

21 26 0.0016 0.1 13.1 3.8 1 23 1234 1257 1234 1257 0.97

22 26 1.4e-05 0.00088 19.6 0.1 2 23 1285 1306 1284 1306 0.95

23 26 4.6e-05 0.003 17.9 2.9 1 23 1312 1334 1312 1334 0.99

24 26 3.8e-06 0.00025 21.3 2.0 1 23 1340 1362 1340 1362 0.97

25 26 2.4e-06 0.00015 21.9 6.7 1 23 1368 1390 1368 1390 0.99

26 26 0.0022 0.14 12.6 0.3 1 21 1396 1416 1396 1420 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	26	0.0037	0.24	11.9	2.9	1	23	187	209	187	209	0.97
2	26	0.003	0.19	12.2	2.6	1	23	215	237	215	237	0.98
3	26	0.057	3.7	8.2	0.9	2	23	269	290	268	290	0.96
4	26	0.042	2.7	8.6	2.2	1	23	362	385	362	385	0.93
5	26	2.4	1.5e+02	3.1	4.6	2	23	396	419	395	419	0.93
6	26	3.7	2.4e+02	2.4	0.5	1	21	425	445	425	446	0.88
7	26	1.4	89	3.8	3.8	1	23	461	483	461	483	0.98
8	26	0.00071	0.046	14.2	1.1	1	23	557	580	557	580	0.97
9	26	0.028	1.8	9.1	0.1	3	22	591	610	589	610	0.93
10	26	6.9	4.5e+02	1.6	4.7	1	23	619	642	619	642	0.95
11	26	0.0005	0.032	14.6	0.4	2	23	673	694	672	694	0.97
12	26	1.9e-05	0.0013	19.1	5.6	1	23	702	724	702	724	0.98
13	26	0.031	2	9.0	0.4	1	23	875	898	875	898	0.95
14	26	0.0082	0.53	10.8	1.5	1	22	905	926	905	926	0.96
15	26	0.11	7	7.3	0.4	1	23	935	958	935	958	0.92
16	26	1.5e-05	0.001	19.4	1.2	1	23	983	1005	983	1005	0.97
17	26	0.00014	0.0089	16.4	0.9	1	23	1012	1034	1012	1034	0.98
18	26	0.0038	0.24	11.9	0.0	2	22	1061	1081	1060	1081	0.95
19	26	0.039	2.5	8.7	4.0	1	23	1126	1149	1126	1149	0.96
20	26	0.0071	0.46	11.0	0.4	1	23	1186	1209	1186	1209	0.96
21	26	0.0016	0.1	13.1	3.8	1	23	1234	1257	1234	1257	0.97
22	26	1.4e-05	0.00088	19.6	0.1	2	23	1285	1306	1284	1306	0.95
23	26	4.6e-05	0.003	17.9	2.9	1	23	1312	1334	1312	1334	0.99
24	26	3.8e-06	0.00025	21.3	2.0	1	23	1340	1362	1340	1362	0.97
25	26	2.4e-06	0.00015	21.9	6.7	1	23	1368	1390	1368	1390	0.99
26	26	0.0022	0.14	12.6	0.3	1	21	1396	1416	1396	1420	0.91

Sequence Information

Coding Sequence: atgttgccGTCGGATATTTGTCGCACGTGTGCGCTGCAGGTTGACTGCTTGCTGCCGCTGACGACGCGGATCGAGAAATACGCAAATAAGAGCTTCAACGACATGTTGCACGAACTGACGCACAACGATCCGCTGCTGGAGCATACGGATGACGGCCTGCCGCAGCATTTGTGTGACGACTGCCTGGGCAAGCTGGAGGCGGCCTATGGGTTTGTGCTGCAGGCTCGCCAGGCACAggagcaactgttgctgcagctgctcaaagGAATGCAGACGAGCGAAGCGACTCAGGATCAGCAGGAGGAGGCGCAGGTGGATGTGGATGGATTAAAGTGGCAGCCGGAAAGCGAGAGCGACAGCGCTGAGGCGGCTGCTGATGACCAGGATGTggagcccaagcccaagcagCTACGGCGCAGCGCACGCAAGTCCAGACCCGCCACAGACAGCGAAAATGAAGACACtaATCCCGACAGCTCTGTGAACACAAAGCCCGTGCCGCTCAAGCGTCGTCGCGGTCGGCCGTCCAAAAAGCAAACCATCAACGAGGACGGTCGCCATGTGTGCAGGGTGTGCGGCAAGACCTTCTCCTGGCACCGCGACATGCAGCGCCATGCGCGCGTCCATTTCGAGCAGGCCGCCTTCGTGTGCAACATATGCGGCAAGCGCTTCCTGCGCAAGGACAAGTACACGTTCCATCTGCGTACCCACGAGCGCAGCAGCGCCAAAAggcaggcgctgcagctgagCGGCGAATGGCGTTTCGCGGAGCGCCTCTATTGCTCTGCGCGGCTGAAGCGGGTCGAGTGCAAGCTGTGCGGATTGAAGTGCCAACGTATCCAGGAGCTGCGCGAGCATCTGGCCCGCCACGTGCGCATTGAAACCCTGTCCGAGCTGAGCCTGGAGGCGGATGCCATTCGGGAGCGCTTCGGCGGCGAGTTGAATTTGGCGCAAATCAAGCAACAGGTGTGCGCAGACATTGCCCAGGGACAACTGGACAAGTACTGCTCCGTGGTAAATGCGTATGGCTACGAGCTCGGCCTGAGCGATTCGGATGAGGAGCCGGTGGGCGTGGCGCCTCCATACCAGTGCCTGCCCTGCAGCCTGTCCTTCACGCGCAAACATCGCCTCATGCGGCACACGCTGGAGGAGCACACGCAAGCGGACGCGGCTTCAACTTGGCAGCGTTGCGATGTCTGCCAAATTGGCTTCGTGTGCCAGCggatgctgcagcagcatcggcGCACGCAGTGCCACAATCCGCTGAGGCACCACAGCTGCCCCAACTGTCCGGGCAAATTCATCTGGCAGCTGAATCTCGAGCAGCACGCGTGCACGCTGCAGGAGGAGCAGCCCGAGCAGTTGCAGAGCGTGCGCCAGTTCCAGTGCTGTCTGTGCGATGCCCACTGTCAGAGCATGGCCAAATTGCGCGCCCATGTGCTCATCCATCGTGACGGAAGCAGCGGCATCGATGGTACTCAGCAGGCGGCCTTCTTTCGCACCTACCATCCGGACGGGCTCGACTGCAGCCCGGCGGAGATGAGCGCGCGCATTGCCGGCGACTTCGAGGCACAGAACTACGGACGCTACTTCAATGCCAGCACGGACAACGGCCAGGAACTGGATTTCTTTGCCTCGGACACGGACTCCAGTGATGTGGGAGCTCGGCACACGTGCGACCTGTGCGGCGAGTCCACTCAGCGCCTggcccagctgctgcagcatcagCGCAGCCAGCACATGGAGCTGCAGGACCAGCTGCCGCATCTTTGCGAGTACTGCGGCTTGGGATTTGTGGCggaggcgctgctgcagcagcatcgcCGACGCGTCTGCGACAAGCGGGAGGCCAAGTTCCATTGCGAGGAGTGCGCCCTGCACTTTTACTGGCACTCCAACTACGAGCTGCACATGCAGTTGCAGCATGAGCCGGAGGAAGAGGCGGGGACGGAGGCGGAGATGGAGGGGCCCAGCTCCAGGCTAAGAAGCAAGCGACAACCGGCAGCTGCCAAGCTGCAGTGCACCGAGTGTGAGAAGGTCTTCATCTGGCCCAAGGACCTCACGCGGCACAAGCGGCTGCACCAGCCGCAGGCGTTGGCTCAGTTCGAGTGCAACCACTGCGAGCGCAAGTTCCATCGCAAGGATGGCCTCAAGTCGCACATGCGCGTGCAcggcgagcagcagctggaggcaGCGACCGTCAGTGAGGGTGCTCAGACAACGTCCGTGCTGCAGCGCTTGCCGCTGGTGCTGACCCAGTTATGTCGGCCCAACGGCTGCAAGCAGATTCGCTGCATGATTTGCCTCTCGCAGCACTCGAAGATCGCCGATCTGCGCGCGCATCTGGCCAGCCACCAGGTGGCGCTGCAGTTCGTCGAGGAGCGCGGCAGGCCGGAGAGCGTGGCCAACATCAGCCGTGCTCTGTACCCGGAGCTGGCACCGCCGCTGGAGCAGCAAGAGCTCATCGAGCGCATACAGAGCGATGTGGCCGCGGACGTGGAGCTGGACAGATTCATTTCGATCACCAACGAGGCGGGCATGGAGCTCAGTCTGGACAGCAGCGAAacggactcggactcggatTCCGCCGAGCCAcggtgcaacagcagcagcggacgCCACTACAGCTGCGAGTTGTGCCCGCTGCAGGTGCCGCGCAAGCATCTGCTCTATGCCCACCAGCTGGAGCGGCACACGTGGCAGCAGGCGACCCACGTGTGCGGCCACTGCCAGGCCCGGTTCGTCagcgagcagctgctggagcatCATTATCGCACGCTCTGCCGGAACGCCCAGCGGCGTTTCCTCTGTCGCAAGTGCCCGTTGCGCTTCCGCTGGCGCGAGAACCTCAAGCTGCACACGGCCGTGGCGCACCAGGAGGCGAGCGCGGAGCAGTCCAGCCTGGGCAGCCGACTGAATGGGCAGCATCTGCTGCCCGTGGCCAGCTACGATTGCGGCGAGTGCAATCGCAGCTTCAAAATGCAAAAGGATCTCACGCGGCACACGCTGATGCACGCCCAGGAGTCGAGCATCTATCGCTGTCGCTGGTGCGCCCGGCGCTTCTATCGCCAGGCCAACCTGCTGCAGCACATCGAGCGCCACGGCATCAGCGCCGAGCAGCTGCCCTACGCGGAGGCGCTGCTCAATGCCAGCCGGCATCCGCACGGCCCCAAGTGCGTCCAGTGCAAGGTGTGCGATGTGTCCTTTCCCACAATTGCCGCACTGCGCGAACATTTGCAGACGTCGCCCGTGGGCACACATCATGCGCTCGACTCCATGCTCAACTATTCGATTACCAATCAGCTGGGCtacgagctgctgctggacgaCTCGGAGACGGACGAGGAATCCAAGCCGCCGGGCACGCCCGCTCAGTACACGTGCGGCATGTGCCAGCTGCGCTGTGTGCGCAAGTTCGAGCTGCACCAGCATCAGCAGGCCATGCACCGGCTGGAGAGGATTGGGGAGGGCTGCGATCGGTGCATCTACAAGAGCGTCTCCGCGGATCTCATTGCCCACCATCGGCGTGTGCTGTGCGACAACGCGGAGAAGCAGTTCAAGTGCGCCAGGTGCGGCTACCGGTTCATGTGGGAGGCGAATCTGCTGCGGCacatgcagctgcagcatccCGGCGAGGAGGGGCAGCCGGAGGCCAGTTCCATGCCCGTGCCGGAGATGCCCAGTGCCGAGTGCCAGATCTTTCGGTGCGGTCAGTGTCCGCGTAAATACAATCGCAAAGATCGGCTGACGGCGCACGTCAAGAAGTGCCATGCACCGGGCGCGGCCAGCTCCACGGGCGATCAAACGAAGCCAGCGAAGACGTCGGCCGCCGCCAAGCAGCAGAAGAGTTTCCTGTGCGCCTTCTGCGGCAAGGCGGTGAGCTCCTCCTCCAATCTTATCATACACATACGCCGGCACACCGGCGAAAAGCCCTTCAAGTGTGACTACTGCGACATGGCCTTCCCGCGCTCCTCCGACCTGCAGTGCCATCGGCGCACCCACACCGGCGAGCGGCCGCACATCTGCACCGTCTGCCAGAAGGGCTTCGCGCGCTCCtacaagctgcagcagcacatgCGCATCCATAACGGCGAACGGCCCTACAAGTGCACCCACTGCGACAGGTGCTTCACCCAGTCGAACGACCTCACGCTGCACATACGACGACACACGGGCGAGCGTCCCTACCAGTGCAACACGTGCGGCGCGCGCTTCATCCAGGGCACGGCGCTCAAGAATCATCGCCTGCAGAGCGGACACTACGAGACGGAGGTGGGTCAACTGAAGGATCACTAA
Protein Sequence: MLPSDICRTCALQVDCLLPLTTRIEKYANKSFNDMLHELTHNDPLLEHTDDGLPQHLCDDCLGKLEAAYGFVLQARQAQEQLLLQLLKGMQTSEATQDQQEEAQVDVDGLKWQPESESDSAEAAADDQDVEPKPKQLRRSARKSRPATDSENEDTNPDSSVNTKPVPLKRRRGRPSKKQTINEDGRHVCRVCGKTFSWHRDMQRHARVHFEQAAFVCNICGKRFLRKDKYTFHLRTHERSSAKRQALQLSGEWRFAERLYCSARLKRVECKLCGLKCQRIQELREHLARHVRIETLSELSLEADAIRERFGGELNLAQIKQQVCADIAQGQLDKYCSVVNAYGYELGLSDSDEEPVGVAPPYQCLPCSLSFTRKHRLMRHTLEEHTQADAASTWQRCDVCQIGFVCQRMLQQHRRTQCHNPLRHHSCPNCPGKFIWQLNLEQHACTLQEEQPEQLQSVRQFQCCLCDAHCQSMAKLRAHVLIHRDGSSGIDGTQQAAFFRTYHPDGLDCSPAEMSARIAGDFEAQNYGRYFNASTDNGQELDFFASDTDSSDVGARHTCDLCGESTQRLAQLLQHQRSQHMELQDQLPHLCEYCGLGFVAEALLQQHRRRVCDKREAKFHCEECALHFYWHSNYELHMQLQHEPEEEAGTEAEMEGPSSRLRSKRQPAAAKLQCTECEKVFIWPKDLTRHKRLHQPQALAQFECNHCERKFHRKDGLKSHMRVHGEQQLEAATVSEGAQTTSVLQRLPLVLTQLCRPNGCKQIRCMICLSQHSKIADLRAHLASHQVALQFVEERGRPESVANISRALYPELAPPLEQQELIERIQSDVAADVELDRFISITNEAGMELSLDSSETDSDSDSAEPRCNSSSGRHYSCELCPLQVPRKHLLYAHQLERHTWQQATHVCGHCQARFVSEQLLEHHYRTLCRNAQRRFLCRKCPLRFRWRENLKLHTAVAHQEASAEQSSLGSRLNGQHLLPVASYDCGECNRSFKMQKDLTRHTLMHAQESSIYRCRWCARRFYRQANLLQHIERHGISAEQLPYAEALLNASRHPHGPKCVQCKVCDVSFPTIAALREHLQTSPVGTHHALDSMLNYSITNQLGYELLLDDSETDEESKPPGTPAQYTCGMCQLRCVRKFELHQHQQAMHRLERIGEGCDRCIYKSVSADLIAHHRRVLCDNAEKQFKCARCGYRFMWEANLLRHMQLQHPGEEGQPEASSMPVPEMPSAECQIFRCGQCPRKYNRKDRLTAHVKKCHAPGAASSTGDQTKPAKTSAAAKQQKSFLCAFCGKAVSSSSNLIIHIRRHTGEKPFKCDYCDMAFPRSSDLQCHRRTHTGERPHICTVCQKGFARSYKLQQHMRIHNGERPYKCTHCDRCFTQSNDLTLHIRRHTGERPYQCNTCGARFIQGTALKNHRLQSGHYETEVGQLKDH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00541909;
90% Identity: -
80% Identity: -