Dcol005017.1
Basic Information
- Insect
- Drosophila colorata
- Gene Symbol
- Mblk-1
- Assembly
- GCA_035041545.1
- Location
- JAWNLD010000269.1:1816638-1828229[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.4e-06 0.0023 17.6 0.0 9 35 308 335 308 341 0.88 2 2 1.1e-18 1.7e-15 56.4 0.0 1 43 819 862 819 864 0.95
Sequence Information
- Coding Sequence
- ATGGGTCGCAGGAAATGGAAACATTATCAAGATCAACTGACGCGCAAACAATTGAATATCGCAGAGCAACAGCCCATATCAATAACGACAGAAGCAGAAGACAGCAAACACAAGGAGAGCCACTGCAAGCCACTGAACCACCGTTTAGCGCAGCCCAACGGTCAAcatttcaacaacaacaacaacaacggcgcgCTGCAATTTGATAGAGATTTTGACAACAACCACACATCACAAGACCACGACTCAAGTGCAACATCACGTAGCAGCTCAGGCTCACCGTCACCACCGCCAGAACCCAACGATTGGACACCGTCTGATAAGTGCAATTTCTGTGTTAACGGTCGCTTGCTAACGGTAAACGCCAAAGGCGAATTGGTGGCCGAAACAACGGCAACCGCGTCCAGCAGCAATtgtagcaacagcaacaacactaACAACGGCTCAGCTGTGCAGCAGcacgacagcgacagcaactcGAGCGCATCGCTGCACAATAGCAgcagaaataacaacaacaagaacaccaccaacaacaacaacaacaacaagcatagAGCACGCAACAACACTAACGCCGCcacgacgtcgtcgtcgtcgttgtcgtcgtcaaCCTCAAAAGAACTTTTCAAGCTGATCTACCAGCAAGCAGCCGAAATGACATCAATGGAATCGATGGCCGCCAAGCTGGCCCAGTTCACAATGATGGCCGATTTCAATCTGATGAACACGCTGGTGAATCAACAAAATGCTAGCTCGGTAACACCAACTACCTCGGAATTatctgccgccgctgccagtCCCACACTTAAAGACACGCCCAGTCCCAGTGCAGATGCGCCTCTGGATCTAAGCAGCAAACCATCGCCAAATTCATCGATCAGCGGCGATATAAAGACAGCCAGAGATCTGAAAGGCGTGCTGCAGGATGTGCTGGAAAGCAAGCTGGGCCCGCGCAAAGCGGCCAGCCAGTACCAGGTGCCGCGCTCCACGCTGCGCAACAAGCTGTGCAAAATGTCCTCCGATGGCAAACGGCCGAATGCGCCAACGCCCCcagagctgcagcagcacgaACTGGAGCTGGACGAGCAGGACGAATCCGGCGAGGAGGCCGGCGATGGCGATAGCAATGCGTCGACGCCAACGCCGGGCTATCAGAATATAGCGCAACGCATTGCGGCCACCGAGCATCTGCACCAGCCACGCGGCATGTCCGAGCACAATGGCAGCGAACTGGGCGACGATCTCGAACCGATGATGTCGCCAAAATCGATTCGGCCACAAAGCGGCGGCACgcccacagcaacaacagcagcagcagcggccgtcgcagcagcagcggcagctggcgTCAATACCGCCGGACTGCCGATGCCGATCGATTCGAGCATGCTGTTGCATACGCTGGTGCTGGCCGCGAGCATCGGTGTCATGCCCAAGCTGGAGGAGACGCAGACGCTGGGCGATGTGCTCAAAACGCTGCTgatggccaacagcagcggccTTTTGGGCGAAGCACTCGCCGGCGCGGCCGCATCCAGCCAGGAGAGCAATGGCACTGCCtcgctgctgcaacagcagcaacagcaacaccagcaacaccagcagcagcagcaacaccagcagcagcagttaaaTGCTGCGGCCGCTGTGGCCGCCTTTCGTCGTCATCTACCAAAGTCTGAAACGCCTGAGACCAGCTCCTCGCTGGACGCCCATGAGGCGTGCGAGGATCCCATACTGAAGATTCCGTCCTTCAAGGTCAGCGGCGCGCCCAGCGTCTCGCCAACGCTgcactgcaacagcagcggcagcgccagccacaacaataacaataacagcaacaacaacaataacaacaataacaacaacaacagcaacaacaacaacacgagcagcaacagcaatcgcAACGGCGGCGAGCACAGTCCACACTCCGCGTCGCCAATGCTGgcggcagctgttgccgccgcggcggccaacaacagctacaggcagagcagcggcaacagcagcggcaatcTGCTGTCGCCGCCGCCCACAGCGATACAGCAGATGATGGCCAATACTATACACCGCAAGATCAACGAGCAGAGCAGCCAGGACAGCCTGCTGGGGCTCGATAAGcgcaacaatggcaacaccAGCGGCAgcgagtgcagcagcagcggcggcggcggcggtggcggtggcaaCATCAGCAGAAAGCCGAGCATATCGGTGGCGAAAATGATTGGCGGCACGGACACCTCACGCTTTGGCGCCTCACCTAATCTGCTCGCCCAGCAGCATCACAGCCATCTGAATGCGCATCATGCccaccagcatcagcatcagcaccagcaccagcaccagcagcactcacagcatcagcagcagctcagcgCACAGGATGCGGCGGCGCTGGCCGCCGGCAAAGGAACGCGACCGAAGCGCGGCAAGTACCGCAACTACGATCGGGACAGTCTGGTGGAGGCGGTCAAGGCCGTGCAGCGCGGCGAGATGTCCGTGCATCGTGCCGGCAGCTATTACGGCGTGCCACACTCAACTCTGGAGTACAAGGTGAAGGAGCGGCATTTGATGCGGCCGCGCAAGCGTGAGCCGAAACCGCAACCGGATCTCGTGGGGCTGACGGGCGCAGCGAATAAGGTGAATCCCAATATGGTCGGACTCAATCATCTCGACAAGCTGAaggccggcagcagcagcaacaacagtagcagcaacgccaacaacagcgCCAGCTCCAAGCTGAGCAACGCCCTCAAAAACAGCAgcgcggcggcagcggcagcggcggcagcggcagcggcgacagCGCCAAATGGCATGAAGCTGCCCATTTTTGACGCTGCACCGCAATTGTCCTTCCAGCCGAACATGTTCTGGCCGCAGGCGAATGCTGGGGCCAGCTATGGCCTGGATTTCAATCGCAGTCCCGAGTTTCTCAAGTCGCACCTGGCCGAGGTGATGCGCAACAATCCGCTGGCCGTGGCCGCCAATCATCATGGCCATGCGGGCATGAAGAGCGCTCTGGAGTTTACCGAGAACATGTACGACGGCATCATACGGAAGACGCTGAACAGCGATGGCGATGTCGttagcagcggcggcggcggcggcagcggcgtcggcgtcggcatcACCagcggcaatggcaatggcaatgcgcTGCTGGATCAGCTGCTGGTGAAGAAGACGCCACTGCCATTTACCAATAATCGCAGCAATGACTATATCAACGCCGCCTGCTCCAGCGCTTCAGAGGCCGTTAAGCGGCACGGCAGCCCGCTGGGCGCCTATGCGGATATCAAGCGTGAGCGTCCCAGTCCGACGCGCAGCGCCGAAAGTGCCAGCAGCGATGAGGATCATGAGCATTCCAGCAACAttaacatcaacaacaacaacaataataacagcgATCTGGCgcacaacaagaacaacaacaacggcagcagcaacagcaacaacaacaacaacaacggcaatgGCCGCAGCCGGATGACATCGCGCGACTCGGAAACGGACGCCAGCAGCTTGAAGAGCGAACAGTCGCACAGCTCGGCCCGGCTGGCCACAGCTGGCCACAAAATGATGGATCTCAATGGCAGCGTCAACAGTGTCAAATACGAGCCGGAGTCGCAAGCGGCGCAAATCTCGCCCAGTTCCAATTCCATATTGCACGAGAAGCTGGCGCAGATCAAGGCCGAGCAGGCCGAGGAGCAGTTATAG
- Protein Sequence
- MGRRKWKHYQDQLTRKQLNIAEQQPISITTEAEDSKHKESHCKPLNHRLAQPNGQHFNNNNNNGALQFDRDFDNNHTSQDHDSSATSRSSSGSPSPPPEPNDWTPSDKCNFCVNGRLLTVNAKGELVAETTATASSSNCSNSNNTNNGSAVQQHDSDSNSSASLHNSSRNNNNKNTTNNNNNNKHRARNNTNAATTSSSSLSSSTSKELFKLIYQQAAEMTSMESMAAKLAQFTMMADFNLMNTLVNQQNASSVTPTTSELSAAAASPTLKDTPSPSADAPLDLSSKPSPNSSISGDIKTARDLKGVLQDVLESKLGPRKAASQYQVPRSTLRNKLCKMSSDGKRPNAPTPPELQQHELELDEQDESGEEAGDGDSNASTPTPGYQNIAQRIAATEHLHQPRGMSEHNGSELGDDLEPMMSPKSIRPQSGGTPTATTAAAAAVAAAAAAGVNTAGLPMPIDSSMLLHTLVLAASIGVMPKLEETQTLGDVLKTLLMANSSGLLGEALAGAAASSQESNGTASLLQQQQQQHQQHQQQQQHQQQQLNAAAAVAAFRRHLPKSETPETSSSLDAHEACEDPILKIPSFKVSGAPSVSPTLHCNSSGSASHNNNNNSNNNNNNNNNNNSNNNNTSSNSNRNGGEHSPHSASPMLAAAVAAAAANNSYRQSSGNSSGNLLSPPPTAIQQMMANTIHRKINEQSSQDSLLGLDKRNNGNTSGSECSSSGGGGGGGGNISRKPSISVAKMIGGTDTSRFGASPNLLAQQHHSHLNAHHAHQHQHQHQHQHQQHSQHQQQLSAQDAAALAAGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQPDLVGLTGAANKVNPNMVGLNHLDKLKAGSSSNNSSSNANNSASSKLSNALKNSSAAAAAAAAAAAATAPNGMKLPIFDAAPQLSFQPNMFWPQANAGASYGLDFNRSPEFLKSHLAEVMRNNPLAVAANHHGHAGMKSALEFTENMYDGIIRKTLNSDGDVVSSGGGGGSGVGVGITSGNGNGNALLDQLLVKKTPLPFTNNRSNDYINAACSSASEAVKRHGSPLGAYADIKRERPSPTRSAESASSDEDHEHSSNININNNNNNNSDLAHNKNNNNGSSNSNNNNNNGNGRSRMTSRDSETDASSLKSEQSHSSARLATAGHKMMDLNGSVNSVKYEPESQAAQISPSSNSILHEKLAQIKAEQAEEQL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00567457;
- 90% Identity
- -
- 80% Identity
- -