Dcog011029.1
Basic Information
- Insect
- Drosophila cognata
- Gene Symbol
- -
- Assembly
- GCA_035041535.1
- Location
- JAWNLC010000571.1:13224767-13225769[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.3e-12 4.9e-09 36.4 0.0 14 89 146 212 137 212 0.81 2 2 6.6 9.9e+03 -3.0 0.0 74 84 263 273 244 276 0.51
Sequence Information
- Coding Sequence
- ATGCACAATCCTCGAGAGCACCTGCGGTGCCGTAGGCAAGGATGCACCTACACCACAAACAGGGCATTCAATCTGGAGCGCCATGAACGCAACCATGACAAGGGCAAAGTGCCGGTGTCGCAGTACCAGCCGTGTCCACATTGCACCTATGCCGCCGGATCGCAGCACAATTTAATGCGGCATATAGGCAAAAAGCATGCAGCGCTGAGTGGAAAAACGGCAACAAAGCAACAGGCAAgaacaagccaacaacaagccgagcaacaaaaattgccaTCTTCGATGGAGGTGGAATCTGAGTCGGAGTCAGTGCCTAACTGTGTGGAGCTTATTCCGGAGCAGAAGCGCCCAGTGCCAAAATCAGAATCACGGGAATCAGCGGCAGATTCAACGCTTTGGTTTTGGAGCACACCGCAGCAGCTGGAAAGGAATTTTCTGAGGCGTAGTGCTCTGAAGGACGAATGTAAAATACAGGGGCGATCCATCAAGTTGTTCAAATTTTATGCCTTGGTAAGAGCGAGAGGAGGCGCCTTAAATGTGGACCAATGggatgatgttgctgcagccCTGGGCCTGCCATCGGGATCAGGTTGCCAGACCCAAGTAAAGTACATGGAGTTGTTGTACGAATTCGAGAAGAAAGAGGTAAAACGTTCGATGGAGTGGAACAATGTGGAAGGATTGCCTTTTTGGTGGGATGATGGCGATTTTGTCACAGATGACATGCATTTAACATCCAGCGATGAGCAGTGGAAGCACGTGAATTCGCCATCAATAACTGTTCGCAATGCGATTGTGAAAATGATTTACGACAAGTATTATGCGAAGCATTTTAATAGTAGCAAACCGTTTCAACGGTTTTACATGAAGGATTCATGGTTGacggcaacaattttaaattgtaaagcGCTAAAATGTGAACTGTCTAAGCATTGTTCGGGTTCTTGA
- Protein Sequence
- MHNPREHLRCRRQGCTYTTNRAFNLERHERNHDKGKVPVSQYQPCPHCTYAAGSQHNLMRHIGKKHAALSGKTATKQQARTSQQQAEQQKLPSSMEVESESESVPNCVELIPEQKRPVPKSESRESAADSTLWFWSTPQQLERNFLRRSALKDECKIQGRSIKLFKFYALVRARGGALNVDQWDDVAAALGLPSGSGCQTQVKYMELLYEFEKKEVKRSMEWNNVEGLPFWWDDGDFVTDDMHLTSSDEQWKHVNSPSITVRNAIVKMIYDKYYAKHFNSSKPFQRFYMKDSWLTATILNCKALKCELSKHCSGS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00482016;
- 90% Identity
- iTF_00619625;
- 80% Identity
- -