Basic Information

Insect: Drosophila carrolli
Gene Symbol: -
Assembly: GCA_018152295.1
Location: JAECXJ010000170.1:4361316-4366530[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.0013 0.097 13.2 0.4 1 23 148 170 148 170 0.97

2 14 5.5e-05 0.0042 17.5 3.0 1 23 377 399 377 399 0.98

3 14 0.65 49 4.6 2.4 1 23 405 428 405 429 0.92

4 14 0.0063 0.47 11.0 0.8 1 23 450 473 450 473 0.96

5 14 0.001 0.079 13.4 1.9 3 23 742 762 741 762 0.92

6 14 0.042 3.2 8.4 1.4 1 23 768 791 768 791 0.98

7 14 1.3 95 3.8 1.5 2 23 828 849 827 850 0.92

8 14 0.0022 0.17 12.4 0.6 1 23 871 894 871 894 0.97

9 14 0.011 0.87 10.2 0.1 1 23 1096 1119 1096 1119 0.94

10 14 0.0093 0.7 10.5 4.1 1 23 1131 1153 1131 1153 0.98

11 14 1e-05 0.00076 19.8 0.6 2 23 1158 1180 1157 1180 0.96

12 14 0.036 2.7 8.6 3.3 2 23 1187 1211 1186 1211 0.92

13 14 0.08 6.1 7.5 1.4 1 23 1216 1238 1216 1238 0.96

14 14 0.0018 0.13 12.7 0.8 1 23 1244 1267 1244 1267 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.0013	0.097	13.2	0.4	1	23	148	170	148	170	0.97
2	14	5.5e-05	0.0042	17.5	3.0	1	23	377	399	377	399	0.98
3	14	0.65	49	4.6	2.4	1	23	405	428	405	429	0.92
4	14	0.0063	0.47	11.0	0.8	1	23	450	473	450	473	0.96
5	14	0.001	0.079	13.4	1.9	3	23	742	762	741	762	0.92
6	14	0.042	3.2	8.4	1.4	1	23	768	791	768	791	0.98
7	14	1.3	95	3.8	1.5	2	23	828	849	827	850	0.92
8	14	0.0022	0.17	12.4	0.6	1	23	871	894	871	894	0.97
9	14	0.011	0.87	10.2	0.1	1	23	1096	1119	1096	1119	0.94
10	14	0.0093	0.7	10.5	4.1	1	23	1131	1153	1131	1153	0.98
11	14	1e-05	0.00076	19.8	0.6	2	23	1158	1180	1157	1180	0.96
12	14	0.036	2.7	8.6	3.3	2	23	1187	1211	1186	1211	0.92
13	14	0.08	6.1	7.5	1.4	1	23	1216	1238	1216	1238	0.96
14	14	0.0018	0.13	12.7	0.8	1	23	1244	1267	1244	1267	0.97

Sequence Information

Coding Sequence: ATGGCGTTGAACAAGAGAAACAGCTCGCACTCGGACGCAGTTTCGGGCGCCGAGGTGGACTACAAGTTTTCGTGTCGCTGCTGTTTGAAGACAAACGCTGAGTACCTCAAACTGGACTCGGTGGCGATGGCGCGTAGCCTTGATCCCGCGGATGCTGGGGACAAGATCCCGCTTATTCGCTGCCTGCTCTTCTGCGTGGGAGCCGAAAATCCGCCGGAGCTTCCGCAGTACATCTGCGTTGAGTGCAGCAAGAGCCTGCAGGTGGCCTACTATTTCCTGAAGAATGCATTGCGTGCCCACGAGATACTGTGCAGGAAGCTGGTCCCGAAGTCTCAGAGGCGACTAAATGGATCCTTGGGTCTGGAATCAGAGAAGAGGCATACCAAGCCAGTCCCACAGGAGCAGGACGAGGAGGAGACGAAACCACTGAAGACCATGCGGCACGAGTGCCAGGTGTGTGGAGTGGTAGTCTACAATCGCCTGGAGCTTAAGCAGCACATCCGCCAGCATGCAGAGGGTATCTCGTACAACTGCCAATATTGCATCTTCACCACACTAAAACAACGCTTGCTGCTGGAACACTATGTCACACTTCATGGCCTGTCCATTAGCCAGGCGGACGACCATATCAAATCGAAAAAATTGCAAGCACCCAATAGCGAAGAGCCCAAGGCGGTGTGCACGCTGGAGGACATGGAGCTGCTGATACCCACTGTTTTAGCCCCAGATGACTACGTGCAGCAGCAGCCGCAGATCGATTCAGACCAGCTGCGGGACATCGAGCAGCAGCTGGCCGTCAGCATGGGTGAGGCGGGGCCGGGAGTGGAAACCCTCACCTCCACCCTGCCACCTATGGATACCCCCAATGTTAGCATCGGCACCGAGTACCTCGTCCTGCCCGATGGCTCTTTGCAGCAGGTCAACGGAAGCGGCGTGGTCATAGAGTATATTGACGATAGCAAGCCGAACAATCACCCCAATGTAAATATTAGCCTACAAAATCTTCTATCCGGCGATGACCCTAGCGAGCCAATGGATATTGATGTTAGCGAGCTGATCGTGGAGGAAGTTATGCCGCAGATAAGAGTCAAGCCAAAGCCAGTCGTTGGCGGATCGCCCATTTACAAGCACAAGTGCAAGCTGTGTCCCAAAACATTTTCAACAGTGGCGCGACTAAAATCTCACCAGTTGACCCACAGCAATTTGCCCAAGTTCTTTTGCGACCAGTGCGATTTCTACTCGCTGCGCAGCTCCGATCTCATCCAGCACTACAAAATGGTTCACCATCGGTCTAATGAGAGCGGAAAGAGCCAGAAGGACCCGGCCCCGGGGGAAGAGTCGGGCGTCTACTCATGCGACATGTGCCTCTTCGAGACGCGCACCCCCAGTCAGCTGAGAGTCCATTACAAAGAGCGGCACACGGTCCAGCCCACTGAGGTGCAGCTACGTCCCAGCTGGACCAGCGATGTGGGAGCCAGCACTGTTCAAGCGTCACCGAATGTCGTAGCCAGGAAATCAGACAACGACATCCCAGTGGGCATTAAATGTCCGCCAATCGATTCAGATCCGATAGTTGTTGTAGATCCGCCAGTTGTTTCGGAAACGCAGGTAGAAGAGCAGAAGCCAGCGGTCATGTCCACCACAACATCAACGACTATCACGCAAACAGGCGAAATCAACATGGTAGTGGATGCCACGCCGCTCTTCTATGCGCCAACTTCCAGTGCGACGGTCGTTACACAATCGGTTCCAGTGACAACAGTAGGGGAATCCACAGGCGGAACCGACAGCAAAGCATTTGGAATCTTTCCGGAGGTCTCACAGACCAATCTTCCAGCGAACGAATCCGTTCAGCAAACGCTATCCGCCAATACGTCTAACATCTCCATGTTTGGCGACATGCAGGATTTCATTGACAACACCGATGTGGCTGCGATATGCACCATTCCCGCGGATGATATGCCCGTGGTAGATGGCGATGATATTGTGATCGATAATAACAATATCAGTATTGATTTTGATGCCGAGAATCTGTTCGAGGACTTTGAGGAGGAGGACGATGCGGTGGGCGAAGAGGAGGAGGAGGAAGAGGAAGACGCCGACAACGATGACGAGAATGACAATAATGATGCTGCCACTGATCAGAATCTGCTATTAACTAGCGACGATGATGATGTGGACGATTTTGATGACGAGCAATCGAAGCATTTACAGAAGCCTTATTGCATTTACTGCAACAAGAAGTTTACAAGCCAGTATAAATTCGAGAATCACATGTTTGTCCATCGGGGCTTAGCACCCTATCGCTGCGAGCTGTGCACCAATCTCTACAACATGAAGCGACTGCTGATTAGGCATTATAAAACCGTGCACAAACGAATGCCAACAAGGGACATGGTCCAGGCCAAGGGCGATAAAGTTTCCGTTGCACGCACCAACATTGAGAAGCTCTGTATGGACAAGATCAAGAAACCCATGCTCATGTGCGCTAAATGTCCGTTCGAGTGCGAATCGGATGCTGATATGCGAAAGCATTTGAATGCCCACCACGGCATCAATGACGGTGTGTCAGTGCATGCCAATGAGGTGTTTATTATACGCAAACTACCCTTCGAGTGCCCACGCTGCATTCGATCGTTTGCCGCTAAGAGCACTCTTAGCCGCCACTTACAGCGCAGTCACTTGGTAGACACAATTATTGAGATGCAAACGCCGCATTCGGCTGCCACCACCACATCCACGGCGACAAGCTCCGGGACAGAGAACCCGGCCGTAGAGGATGGCAAACATAATGAGATGATGCAGACGGACGGTGGGGCTGAGAGAATAGCGTCGGCTGCCTTAGCTAGCAATGGCGGTGGCAATGAAGGAGAAGGCAGAGAAGATGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTCATCGTCAACCAACCTCTTTCCCACACCCACACCATTTGATTTCGATTATGACTTCATGGGGGAATCCACCCAGCGATTAACTCCCAATCCCCATGCCATTTCCAAAGCCACAAGCACGGATGCCTCGTCCGTTAACGGGAGCGACAAACTGCTGACAGCCGCCGCCATGGCTGCATCGCCTGCAAAGGGTCTGCGCTCAATGTCTCGGTTGCCCCGCGGTCCCATTTACGTCTGCAAGCTGTGCAGCAGGGCCTTCGACGAGTTGGGCAAGTTGGTCAAGCACGAGATGGAGATGCACTCCAATACGGAAAGAGCGCGTTGGGGCTACCAGCACAAGTGTGCCATTTGTAATACCTCCTACCGCACGTTGACGCTGCTTAAGTTTCACATGAAACGGCATGCCAATCGGAAGCCTTGCAATTTGTGCCCCAAAACCTTTGTGACGAACGCGGAGCTGGAGCGGCATACGAAGAGCAAACACAGCAAGGAGAAGACGATACGTTGTTCGTACGATGGCTGCCGGAAGATGTTCGCCTTTAAGCATCACATGGTTCGTCATCAGAACGCCTCCCATCAGACCCCTCGGTATAATTGCCTTGTTTGCAACAAGGAACTATTGAATAGTATGCATCTGCGGAATCACATGAGCGAGCACAAGGACACGGTTTCATACCAGTGTCCCAAGTGCGATCGCACATATTTGCGGCGTGGCAGACTGCAAACCCATGTCCTCAAGATTCACAACATCCGACTGACCGGCGAAGAGATGGCTGCCATTACTGCAAACGGTAAAATATATACCAATCCGGATGACCTTAAGGTAAAAACCGACGGGGAGCAACTTACAAGTCGTAAGGATCTCGACGCCGAAGATGAAATCAGAGACGAGACCGCCGCTGCAGCCGATAATTCCAAGTAG
Protein Sequence: MALNKRNSSHSDAVSGAEVDYKFSCRCCLKTNAEYLKLDSVAMARSLDPADAGDKIPLIRCLLFCVGAENPPELPQYICVECSKSLQVAYYFLKNALRAHEILCRKLVPKSQRRLNGSLGLESEKRHTKPVPQEQDEEETKPLKTMRHECQVCGVVVYNRLELKQHIRQHAEGISYNCQYCIFTTLKQRLLLEHYVTLHGLSISQADDHIKSKKLQAPNSEEPKAVCTLEDMELLIPTVLAPDDYVQQQPQIDSDQLRDIEQQLAVSMGEAGPGVETLTSTLPPMDTPNVSIGTEYLVLPDGSLQQVNGSGVVIEYIDDSKPNNHPNVNISLQNLLSGDDPSEPMDIDVSELIVEEVMPQIRVKPKPVVGGSPIYKHKCKLCPKTFSTVARLKSHQLTHSNLPKFFCDQCDFYSLRSSDLIQHYKMVHHRSNESGKSQKDPAPGEESGVYSCDMCLFETRTPSQLRVHYKERHTVQPTEVQLRPSWTSDVGASTVQASPNVVARKSDNDIPVGIKCPPIDSDPIVVVDPPVVSETQVEEQKPAVMSTTTSTTITQTGEINMVVDATPLFYAPTSSATVVTQSVPVTTVGESTGGTDSKAFGIFPEVSQTNLPANESVQQTLSANTSNISMFGDMQDFIDNTDVAAICTIPADDMPVVDGDDIVIDNNNISIDFDAENLFEDFEEEDDAVGEEEEEEEEDADNDDENDNNDAATDQNLLLTSDDDDVDDFDDEQSKHLQKPYCIYCNKKFTSQYKFENHMFVHRGLAPYRCELCTNLYNMKRLLIRHYKTVHKRMPTRDMVQAKGDKVSVARTNIEKLCMDKIKKPMLMCAKCPFECESDADMRKHLNAHHGINDGVSVHANEVFIIRKLPFECPRCIRSFAAKSTLSRHLQRSHLVDTIIEMQTPHSAATTTSTATSSGTENPAVEDGKHNEMMQTDGGAERIASAALASNGGGNEGEGREDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSSTNLFPTPTPFDFDYDFMGESTQRLTPNPHAISKATSTDASSVNGSDKLLTAAAMAASPAKGLRSMSRLPRGPIYVCKLCSRAFDELGKLVKHEMEMHSNTERARWGYQHKCAICNTSYRTLTLLKFHMKRHANRKPCNLCPKTFVTNAELERHTKSKHSKEKTIRCSYDGCRKMFAFKHHMVRHQNASHQTPRYNCLVCNKELLNSMHLRNHMSEHKDTVSYQCPKCDRTYLRRGRLQTHVLKIHNIRLTGEEMAAITANGKIYTNPDDLKVKTDGEQLTSRKDLDAEDEIRDETAAAADNSK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00588363; iTF_00529776; iTF_00512222;
90% Identity: iTF_00588363;
80% Identity: -