Basic Information

Insect: Drosophila carrolli
Gene Symbol: Paris
Assembly: GCA_018152295.1
Location: JAECXJ010000159.1:16969613-16970698[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.0037 0.28 11.7 2.0 1 21 139 159 139 161 0.96

2 8 2.9e-07 2.2e-05 24.6 0.8 1 23 167 189 167 189 0.99

3 8 6e-07 4.5e-05 23.6 1.1 1 23 195 217 195 217 0.99

4 8 1.6e-06 0.00012 22.3 8.0 1 23 223 245 223 245 0.98

5 8 0.00036 0.027 14.9 0.8 1 23 251 273 251 273 0.99

6 8 4.7e-07 3.5e-05 24.0 1.4 1 23 279 301 279 301 0.98

7 8 2.4e-06 0.00018 21.7 0.5 1 23 307 329 307 329 0.99

8 8 8.3e-06 0.00063 20.0 5.8 1 23 335 357 335 357 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.0037	0.28	11.7	2.0	1	21	139	159	139	161	0.96
2	8	2.9e-07	2.2e-05	24.6	0.8	1	23	167	189	167	189	0.99
3	8	6e-07	4.5e-05	23.6	1.1	1	23	195	217	195	217	0.99
4	8	1.6e-06	0.00012	22.3	8.0	1	23	223	245	223	245	0.98
5	8	0.00036	0.027	14.9	0.8	1	23	251	273	251	273	0.99
6	8	4.7e-07	3.5e-05	24.0	1.4	1	23	279	301	279	301	0.98
7	8	2.4e-06	0.00018	21.7	0.5	1	23	307	329	307	329	0.99
8	8	8.3e-06	0.00063	20.0	5.8	1	23	335	357	335	357	0.98

Sequence Information

Coding Sequence: ATGGAGAAAATTTGCCGGGCTTGTCTGGGAAATTCCGGAAACCTGGTCAACATTTTCGACCGGATGCCGAAACTGGACATCTCCATAGCAGAAATGATCAGCGAGTGCACTGGATTCGAGGTCAATCGTGCCGATTCGCTTCCCAAGACAATTTGCCCTCCTTGTCTGGTGGACGCGCAGACTGCATTTAAGGTCCGAAAGACTTGCGAGAGGAGCTACCAGTTCTTCTGCCAGGTCAGAGATGAAGGCATCGAAGAAGCCATTTGCGCGTTGCTCGAAGAAGAAGACTGGGAAATTTCTGACAAGGAATGCGAGGAAAATGCCCCTAATCCTGGTGAAGGAGCTGGCCAGGATCCAAAATCCCCGAAAAACAAGAAACGACAACGAAGGAGAAGAAACTTGGATAAAGAAATTTTTAAATGTCCGCATTGTTCGAGGATCCTTGTTAATAGAGCAGTTCTTAAAATTCACATTCGCTGTCACACAGGTGAAAAGCCTTATAAATGCCCTCATTGTCCCAATTCCTTTGCACAGCAACCCACACTTAAGTCGCACATCCGCATCCACACGGGCGAGCGACCCTTCAAGTGCTCCGAGTGCTCCAAGTCCTTTGTGAAGGGTTCCGACCTCCTGCGCCACCAACGAATCCACGAGGGAATCCGCCCGCACAAGTGCTCTTATTGCAAGAAATTCTTTGGCAGAAAATCCCATCTGCGGGATCATATTCGCACTCACACCGGAGAACGACCCTTTCAATGTACCCAGTGTCCCAATTCGTATCCCTTGAAACAACAACTTCGGGGACATATGACTACCCATTCGGATGCAGGATCGTTTCAATGTTCCCAGTGCCCGAAATCGTTTGCAAGAAAGAAATTTCTTAACGAGCATATTAAAATACACTCTAAAAATCCTCTGTTCAAATGTCCTCAATGCTTGATGCAATTTACTTCTAAGTATGCTCTTCAAGCCCATATCCTCACTCATTCGACGAGTAAGTCCCATAAGTGCTCCCTGTGCTCCAAGTCCTTTAGTCTGAAGCGCTACCTCAATAAGCACCTTCGAACTCATAGAACAGAAAAGTGA
Protein Sequence: MEKICRACLGNSGNLVNIFDRMPKLDISIAEMISECTGFEVNRADSLPKTICPPCLVDAQTAFKVRKTCERSYQFFCQVRDEGIEEAICALLEEEDWEISDKECEENAPNPGEGAGQDPKSPKNKKRQRRRRNLDKEIFKCPHCSRILVNRAVLKIHIRCHTGEKPYKCPHCPNSFAQQPTLKSHIRIHTGERPFKCSECSKSFVKGSDLLRHQRIHEGIRPHKCSYCKKFFGRKSHLRDHIRTHTGERPFQCTQCPNSYPLKQQLRGHMTTHSDAGSFQCSQCPKSFARKKFLNEHIKIHSKNPLFKCPQCLMQFTSKYALQAHILTHSTSKSHKCSLCSKSFSLKRYLNKHLRTHRTEK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00512149;
90% Identity: iTF_00512149;
80% Identity: -