Basic Information

Gene Symbol
grh
Assembly
GCA_018152295.1
Location
JAECXJ010000160.1:2229645-2257659[+]

Transcription Factor Domain

TF Family
CP2
Domain
CP2 domain
PFAM
PF04516
TF Group
Beta-Scaffold Factors
Description
This family represents a conserved region in the CP2 transcription factor family.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3.3e-63 3e-59 200.0 0.5 24 221 747 939 733 941 0.93

Sequence Information

Coding Sequence
ATGCAGGAGGCTACGAGCACTACGAACTATGCCCTTTCGTACACGGATTGGATGTCCGAGCCACGGACCCTCGGACCCACGGAGCAATATAGCAAAAGGGGTGGTTGTACTTCTTCGCCGGACACGGACACGAATGCGGACACGGACACGGACAGCGGTCTGAATGGGCCGGAGGTGCGATGTCCAACGTTGAGAAACAATGACAAAAAGGTGAAGCGCAGCCACTCGTCCGTGACAAATGCGAAGCCCAAGGAAAGTGGAAGGACTTGTGCATCTGCCGCGAATGATTCCGAACCGGTTGGCAGTGGAACCCAGGATCACCTTGCCTTGGGCCAGCACTTCCCAGGCCGATCCGCATGGAAGCCCATCGAGATTGCCATCGAGACCACAGCGGTCCTGCCTCCTTTTCCATTTCTGCGATTTTTCGCAATTTGCGCACTCGCCTTCAGGCGAGGCTTCGGCTTGGACTCGCTGCATTCGGGGCATGTGGAAACCGATCCGCAGCAGCAGGAGCAGCAGCTCCTCCACCACTACTACGGTCACAATGATAGCTTAAAGGACCAGGGACTGGGATTGCCCCTGGGCCACCATCAGGATCATCAGCAGCCCCATCATCACCAGCTCACAGCATCCGGTTTGATGCAGGCAGTGGCCGCCGAGATCCAACTGAACCAGGATCAGGAGCAACTGCCTCCGCCTCACCCCACTCCCTCCCAAAACAGTCCTTATCCCATCTATAGCTATTATCGCAGCGAAGGCGAGAAGGATAGCCTCGGATCAGCCGCTGCTGAGCTGCCCTGGAGCAGTGGAAAGCTCAATGGCCAGACCACACCTATCGATGTCTCTGGCCTATCGCAAAATGAGATTCAAGGCTTTCTGCTCGGCTCACACCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGGACCGGGTTCGGTCATAACGCAGAAGATCTTGCACGTGGATGCAACAACGGCAAGTGAAGCTGATAGGCCCAGCACACCCAGCACACCGAGCAGCACCACCAGCAGCACTGAATCGGAGCCAGGATCAGGATCGGGATCAGGATCGCCGGGAGCCAGGAGCACAGCCACCAGACTTGAGATGTACGCGACCACGGGCGGCACACAGATCTACCTACAGACCACACACCCCAGCACGGCGAGCGGAGCGGGCGGTGGTGCTGGGCCCGCTGGAGGCGCCGGCGGCGGCGGGGGCGTGTCCATGCAGGCGCAGAGCCCCAGTCCGGGCCCCTACATCACGGCCAACGACTACGGCATGTACACGGCCAGCCGCCTGCCACCCGGTCCCCCGCCCACCAGCACCACCACCTTCATAGCGGAGCCCTCCTACTACCGCGAGTACTTCGCGCCGGACGGCCAGGGCGGCTACGTTCCGGCCGGCACGCGCTCCTTGTACGGCGACGTCGACGTGTCCGTGTCGCAGCCCGGCGGGGTGGTCACCTACGAGGGCCGCTTCGCCGGCAGCGTTCCCCCGCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGCCACGCCCCTCTACGCCAAGGCCATCACGGCGGCGGGTCTCACGGTGGACCTGCCCAGTCCGGATTCGGGCATCGGGACGGACGCCATCACGCCGCGGGATCAGACCAATATCCAACAGTCCTTCGATTACACAGAGCTGTGTCAGCCGGGCACCTTGATCGATGCCAATGGCAGCATACCCGTGAGCGTGAACAGCATCCAGCAAAGGACCGTGGTCCACGGCAGCCAGAACAGCCCCACCACTTCGCTGGTGGACACGAGCACCAATGGATCCACGCGATCGCGGCCCTGGCACGACTTTGGCCGCCAGAATGATGCCGACAAAATACAAATACCAAAAATCTTCACAAACGTGGGCTTCCGATATAACCTGGAGAGCCCCATCAGCTCATCGCAGAGGCGCGAGGACGATCGCATCACCTACATCAACAAGGGTCAGTTCTACGGAATTACGCTGGAGTATGTGCACGATGCGGAAAAGCCCATCAAGAACACCACCGTCAAGAGTGTGATCATGCTAATGTTCCGCGAGGAGAAGAGCCCCGAAGATGAGATCAAGGCCTGGCAATTCTGGCACAGTCGTCAGCATTCCGTGAAGCAGAGAATCTTGGATGCAGATACGAAGAACTCGGTTGGCCTCGTTGGCTGCATCGAGGAAGTGTCGCACAATGCCATCGCCGTCTACTGGAATCCGCTGGAGAGCTCCGCCAAGATCAACATTGCGGTTCAGTGCTTGAGCACGGATTTCAGCAGTCAAAAGGGAGTTAAGGGCCTGCCGCTGCACGTACAAATCGACACATTCGAGGACCCCAGAGATGCGGCGGTCTTCCACCGCGGCTACTGTCAGATAAAGGTCTTCTGCGATAAGGGTGCCGAGCGCAAGACGCGCGACGAGGAGCGACGGGCCGCCAAGCGAAAGATGACCGCTACGGGCAGAAAGAAGCTGGACGAGCTGTACCATCCGGTGACGGATCGGTCCGAGTTCTACGGCATGCAGGACTTCGCCAAGCCGCCGGTGCTGTTCTCGCCTGCGGAGGACATGGAGAAGAGCTTCTACGGCCATGAGACTGACTCGCCGGACCTGAAGGGGGCCTCGCCGTTCCTGCTCCACGGCCAGAAGGTGGCCACGCCGACGCTCAAGTTCCACAACCACTTTCCGCCCGACATGCAGACCGATAAGAAGGACCACATACTGGACCAGAACATGCTGAGCAGCACACCCCTGACCGACTTTGGTCCGCCGATGAAGCGCGGCAGGATGACGCCGCCCACCTCGGAGCGTGTGATGTTGTATGTGCGGCAGGAGAACGAGGAAGTGTACACGCCCCTCCACGTGGTGCCGCCCACCACGATCGGCCTGCTGAATGCGATTGAAAACAAATACAAAATCTCAACAACGAGCATAAATAACATATATCGCACAAACAAGAAGGGGATTACTGCGAAAATTGACGATGACATGATATCGTTCTACTGCAACGAGGACATCTTCCTGCTGGAGGTGCAACAGATCGAGGACGACCTGTACGATGTGACGCTCACGGAGCTGCCCAACCAGTAG
Protein Sequence
MQEATSTTNYALSYTDWMSEPRTLGPTEQYSKRGGCTSSPDTDTNADTDTDSGLNGPEVRCPTLRNNDKKVKRSHSSVTNAKPKESGRTCASAANDSEPVGSGTQDHLALGQHFPGRSAWKPIEIAIETTAVLPPFPFLRFFAICALAFRRGFGLDSLHSGHVETDPQQQEQQLLHHYYGHNDSLKDQGLGLPLGHHQDHQQPHHHQLTASGLMQAVAAEIQLNQDQEQLPPPHPTPSQNSPYPIYSYYRSEGEKDSLGSAAAELPWSSGKLNGQTTPIDVSGLSQNEIQGFLLGSHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGPGSVITQKILHVDATTASEADRPSTPSTPSSTTSSTESEPGSGSGSGSPGARSTATRLEMYATTGGTQIYLQTTHPSTASGAGGGAGPAGGAGGGGGVSMQAQSPSPGPYITANDYGMYTASRLPPGPPPTSTTTFIAEPSYYREYFAPDGQGGYVPAGTRSLYGDVDVSVSQPGGVVTYEGRFAGSVPPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATPLYAKAITAAGLTVDLPSPDSGIGTDAITPRDQTNIQQSFDYTELCQPGTLIDANGSIPVSVNSIQQRTVVHGSQNSPTTSLVDTSTNGSTRSRPWHDFGRQNDADKIQIPKIFTNVGFRYNLESPISSSQRREDDRITYINKGQFYGITLEYVHDAEKPIKNTTVKSVIMLMFREEKSPEDEIKAWQFWHSRQHSVKQRILDADTKNSVGLVGCIEEVSHNAIAVYWNPLESSAKINIAVQCLSTDFSSQKGVKGLPLHVQIDTFEDPRDAAVFHRGYCQIKVFCDKGAERKTRDEERRAAKRKMTATGRKKLDELYHPVTDRSEFYGMQDFAKPPVLFSPAEDMEKSFYGHETDSPDLKGASPFLLHGQKVATPTLKFHNHFPPDMQTDKKDHILDQNMLSSTPLTDFGPPMKRGRMTPPTSERVMLYVRQENEEVYTPLHVVPPTTIGLLNAIENKYKISTTSINNIYRTNKKGITAKIDDDMISFYCNEDIFLLEVQQIEDDLYDVTLTELPNQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00524186;
90% Identity
-
80% Identity
-