Basic Information

Insect: Drosophila buzzatii
Gene Symbol: -
Assembly: GCA_035045845.1
Location: JAWNOS010000105.1:2554268-2557850[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 5.5 4.3e+02 1.9 1.0 3 23 38 59 36 59 0.92

2 8 0.0022 0.17 12.6 0.6 1 23 517 539 517 539 0.98

3 8 0.00024 0.019 15.6 0.6 1 23 547 569 547 569 0.97

4 8 0.00025 0.02 15.6 1.0 1 23 578 600 578 600 0.98

5 8 5.2e-06 0.00041 20.9 0.7 1 23 651 673 651 673 0.97

6 8 0.00032 0.025 15.2 3.3 1 23 681 705 681 705 0.98

7 8 5.6e-07 4.4e-05 23.9 1.6 1 23 711 733 711 733 0.98

8 8 0.00024 0.019 15.6 0.1 1 23 739 761 739 761 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	5.5	4.3e+02	1.9	1.0	3	23	38	59	36	59	0.92
2	8	0.0022	0.17	12.6	0.6	1	23	517	539	517	539	0.98
3	8	0.00024	0.019	15.6	0.6	1	23	547	569	547	569	0.97
4	8	0.00025	0.02	15.6	1.0	1	23	578	600	578	600	0.98
5	8	5.2e-06	0.00041	20.9	0.7	1	23	651	673	651	673	0.97
6	8	0.00032	0.025	15.2	3.3	1	23	681	705	681	705	0.98
7	8	5.6e-07	4.4e-05	23.9	1.6	1	23	711	733	711	733	0.98
8	8	0.00024	0.019	15.6	0.1	1	23	739	761	739	761	0.98

Sequence Information

Coding Sequence: ATGAGTGTGTTGGCATATCCACGTAAAAATGATGAGGAAATTTTTCGTCAATGCACAAAGGATTGTGGCGTTGTGACGGCCACTGAGGACTTTCAGTCATTCGCCTTGTGCTGCGTTTTTTGCAGCGAAAAGTTTCTTTATTTCGATGCATTCATCGGCCACATGCAAACGGTGCACATGGAGGGCGTGCAGCGCACGATGGAAGGCTCTGGCTCCGCCACTGGCACCAACATGTCCTACCCCATGGGCCAGTCCATGTCGCTGGGTGTAGCCAATGACGATGATGAGGATGTGCCACACGACTATGCCAACAATGGCATGCACCAATTTGATGAGATCGAAGACTTGACGGACGCAGACACTGCCCTGCTGGAGCCACAGATGGTGATCAAACAGGAGCTGCAAGAGCTTGAGAGCAGCAACGACGACGCCGATGACATCGACgacgaggaggaggaagaTGCCAACAACCTCGCCGTGCCCGacgacaatgacaatgacaatgatgaTGTTGACGACGAGAGCGAAGCAATACTGCCCGAAAACGATGTGCCCACACCCAGTGCCAGGCCGCACATAAAACTGAGGGGGCCGGCGGCATATGCGGGCCGGCGCAAAGTCTCCAGGATACAGGTCAAAAGCGAGCCCCTGCCTGTCGAGGGCGATGAGTCCGTGGATGAATACGGCGAAAACGAAGCCGAGGGCGATGGCGAGCAGAGCTACGTGGACGACAATTCCGGCGAGTATCAAGactatagcagcagcagctacaatgCGCAAGGCACCAATCCGCTGGCTGGTGAATCCGATTTCCTAAGCTACGATGAAATGGTTGAGGAGTCTCTCATTGGCCGCGATCGTGAGCTGACCATGCACATCAAGGATCGCAAGATGATACAATTCCTGATACACTCGTACAAGCGCAATCCATTCCTTTGGGATCACAGCCACACTCAGTTTCGGGATCGTGTGAAGCGCGCCCGCTTCCTGGACTGGATTGTGCTCGAGTTTAAGAACCGCTTCAACATCTCCCTGGCCAAGGATGCCATCACTCGCAAATGGGACAATTTGCGCACCGTCTACAAGCGGGAATGCAATCGTATGGCACTCGAAAAGACAAACATCAGCACGCTGTGGTACTTCAAGGAACTCCATTTTCTCAACGAGGTCTATAGCTATAACTCGAAAATGTCCGATGCCGTTGTCAAGGAGACATCGTATAGACGTCGCTTCTCGGCCATTTGGAACGATACGTCGACAGCGAAGCTATTGATGATGGTGAAGCGTTATCAGTGCTTTTACAATCGCTTCGATCCGGACTATCGGAGCAAGGAGCGACGGGGCGAGGGACTGCAACAGATGGCCATGGAACTGCAGCAGTTAATCGATGTGACCACCATACAGATATCCAAGCGAATCTCGCAGCTGCGTTTCGATTACTCCAAGCAGAAGACCGAGCGTCTGAGTGCGGAGCGCATGGGTCGTAAATTCATACcgaattatatatactatgatCAGATGAGCTTCATGGACGACGATATACCGCCATTCAAGTGCCAGCATTGCGGCGAAATTGTCCAAACGCTGCGCGAACTGGATCTCCACATGCTCAGCCATCAGCCGAGTCTGGGCGGCGGCTACTACTGTAACGTGTGCAATATTCAGTTCAACAATGCGGACGAGTTCGAGAATCACAAGCAATTGCATTTGGGCGCTGGCCATGAGGTCAAATATAACTGCGAACTGTGCACGGCCAGCTTTAGAGAGAAGTCGAATTACGATGAACATTTGCGGCGCCACAACGATGAGCTCTTCCTGCCAACATTGGCTCTGAATCACAGCATCCTGGACAGCGCCAGCGGGGATGTGGACGGGGCTGGCGGCGATGGAACAACCATTGTGGGCGCCGGCGAAGAGGAGGATATGTTTCCGCCCGACGGCCCCAAGCCGTTCGCCTGTGAGGTATGCCATCGCACCTTCGCCTCGCCGGGCCACCTGAACGCACATCGCATTGTGCATCAGGACGAGCGCGAGCGCTGCTACAAGTGCGATTATCCCCAGTGCAGCAAATCGTTCGTGTCCCGCCACAGCCTGTTCGATCACCTGAAGCAGCACTACAGCAACGAGGAGTTCAAATGCGACATCTGCGGCAAGATCTTCAAGTCCACCAAGAATCTGCAGAACCACAAGCAGATCCACGACAAGGTCAAGCGCTACGTCTGCCAGATATGCGGCTCGGCATTCGCCCAGGCCGCTGGCCTCTACCTGCACAAGCGACGTCACAATCGTCCCAATGGCACCACCGGTGCCGTTGGCGGTCGTTCCAACCGCACCACGCTCTGA
Protein Sequence: MSVLAYPRKNDEEIFRQCTKDCGVVTATEDFQSFALCCVFCSEKFLYFDAFIGHMQTVHMEGVQRTMEGSGSATGTNMSYPMGQSMSLGVANDDDEDVPHDYANNGMHQFDEIEDLTDADTALLEPQMVIKQELQELESSNDDADDIDDEEEEDANNLAVPDDNDNDNDDVDDESEAILPENDVPTPSARPHIKLRGPAAYAGRRKVSRIQVKSEPLPVEGDESVDEYGENEAEGDGEQSYVDDNSGEYQDYSSSSYNAQGTNPLAGESDFLSYDEMVEESLIGRDRELTMHIKDRKMIQFLIHSYKRNPFLWDHSHTQFRDRVKRARFLDWIVLEFKNRFNISLAKDAITRKWDNLRTVYKRECNRMALEKTNISTLWYFKELHFLNEVYSYNSKMSDAVVKETSYRRRFSAIWNDTSTAKLLMMVKRYQCFYNRFDPDYRSKERRGEGLQQMAMELQQLIDVTTIQISKRISQLRFDYSKQKTERLSAERMGRKFIPNYIYYDQMSFMDDDIPPFKCQHCGEIVQTLRELDLHMLSHQPSLGGGYYCNVCNIQFNNADEFENHKQLHLGAGHEVKYNCELCTASFREKSNYDEHLRRHNDELFLPTLALNHSILDSASGDVDGAGGDGTTIVGAGEEEDMFPPDGPKPFACEVCHRTFASPGHLNAHRIVHQDERERCYKCDYPQCSKSFVSRHSLFDHLKQHYSNEEFKCDICGKIFKSTKNLQNHKQIHDKVKRYVCQICGSAFAQAAGLYLHKRRHNRPNGTTGAVGGRSNRTTL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00535470;
90% Identity: iTF_00546868;
80% Identity: -