Basic Information

Gene Symbol
cdc5l
Assembly
GCA_035045845.1
Location
JAWNOS010000249.1:443413-445824[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 2.3e-11 2.9e-08 33.9 0.0 1 41 241 282 241 287 0.91
2 4 2e-06 0.0025 18.1 0.0 2 45 297 344 296 345 0.93
3 4 8.7e-06 0.011 16.1 0.0 3 46 353 397 351 397 0.90
4 4 2.3e-10 2.8e-07 30.7 0.0 2 43 404 446 403 449 0.95

Sequence Information

Coding Sequence
ATGAGCGATGTAGACGATGTGGACCCTGTATGGAATCATCAACAATTGCTGCAGGAAATAACTACGCTATTGTTAGCTACAACCGAGAGAAGCGATGCGAATGCCTTGCAATTAAATCAAGAACTTCAGCGGCGCCTGGAACAGGTGCGCAGACGTATATTGAAGTTGTTGGAGATAGTGCGCGCTCGTTACAAGCGTAATGAACAGACACTCATCCGCCGACAGAAACAACGCTCTCATAGTGTCATCGTAGACGGCGCTGAAAGCGTTGGCAAGAGCGGAGCAGTGCTGCGCGGCGGAACGTTTCGTTTTAAgggtaatttatattttcgtgATGACGACGGGCGTAGCTGTCCCAACAATGGCGACTATGATAAACGTTGCAGCACCGAAATGTTTCCCACCGATTTTGATATGCGCTCCAAGCATGTCTGGACGGTGGTGGACAAAAAGAATATCGTCATGGGAATCAAGCAGCAGCTTTTGGACCATGCCCGCTTTCAGGCCGCGGCAGTAAAAAAGGCGTCCAAAAACAACATCAATGAACGCAAACGCAAGTGCATCGATCTGCATGCACAAACATTAGCCAGTTTGTTAGCTAATACCGATAGCAATTTCAGCATCGACTGGCATCAGATTAGCACGCTGGATCTTGAGCATCGGCATTCGTCCTACAGCTGTGAGGCTATGTGGCTGGTGTACTTGCAGCCTCAGTTAAAGCGTGACGACTGGACACCTGAGGAGGATAAAGCTTTGCTGGCTGCGGCTAAAGCGAACAAGTTACAAAACTGGCGCGCCATAGCGGCTGCAGTGGGTCAACGTTCCGACTATCAGTGCTTCGTCCGCATGCAGACAACGTTGCGCTTTCACTTGGAGCCAACAAGTGCGATGCGATGGGGTCATGAGGATAATGAACGTTTGCGCGCTGTTGTCCAGCGAAACACGGTAAATGGGTTGACGAACTGGTCGCAAGTTGTAGAGCATTTCCCGGGCAGGTCACGATCGACAATAATTGGAcgctatatgtatgtgctgcATCCCAGCATTAGTCATGctcCTTTTACGCCCAGCGAGGATCTAATGCTCTTCGCTGCCTATGAGGAGTACAATGGCAAATTCAATTGTTTCCCGCGTACTTTGTTTCCCAATCGGTCGCTGGCCCAGCTTCGTACACGATATAACAATGTGCTGGCACAGCGCAATAAAACCGATCCCTGGTCTATGGATGATGACACAAAGCTAATGAGTTTTGTCACTGAGCATGGCACCTCGCAGTGGGTGAAATGTGCCAATTACTTGGGCAATCACACACGTACCAGCTGTCGTACGCGGTTTTTGGTCATCAAGCGTTTTCTTGAACAGCATCCGGACGCGACAGTGAATGACATACCAAGGCGCAAAGCCATAAAAAATGCTCCGGTAACCGCTGACAATTGGGTTCAGCGCTTACAGGAATGGCAAGCGGATCCAGATTCACTGATTACTGATACTGCTCAAAAGCCGAAAGTAAAAAGACCGAAATTAAACTCTGCGACAAATGGAAATTGTTTGGCGCCATTGCGCGGCATTgacttgaatatatatgagtaCTTTAAGTATTCCTATAATTTGAAACTTCATGGCCCGCCAACACCAATCCCGCTCCCACGCAACGAACGTAATCTATATGTGGTAGCCAATGCGCTAAGCTACATGCCACCAGCAACTGACACCCAATTGGTGCAGACCATCACTCTGAACAAGCAGATAAATCGATGCTACAGCAAGATGTTGCGTCAATTGCCAGCCTTTGAAACAAGTGCATCTGCGGCAACGCCACTGTTGCTGCCGCCTAATTGGTCCACAATGATGGGCTTTCGTGCCATATGTATTTTGTCAGTGCATTTCCGCAATCATGCAAAGATTAGCACTGAATTGAAACTTGCCGTCAGCTATGATGAATCACAGTCAGCAATACAGCTATTTCGGCAACGATTACGCACCCTCTTCTATAACACTACACTACTGAGTCGGCTGGAACCTACTTCATTTGAGCAGCTTCCCGCGGCTTTGATGGCACTGCCGCGACCAGCTCTATGTTATAGTTTGACAAAGAAATCTGATCCGCCGACATCTACTCAGCATCAGAAGCAAAACCAACAGAAGCACGAATCATCCAGAAACTTATGTGGATTGAACGCTCAAGAGATTGCTCGCCGGCAAATCGAAGAAATTAACCAATTAACACTGTCGCAGAAGAAGCTTAAATCCGAGTTTAAGGATGAGCCGAATGTGAAACAGGAGATGTCTTACGAATAG
Protein Sequence
MSDVDDVDPVWNHQQLLQEITTLLLATTERSDANALQLNQELQRRLEQVRRRILKLLEIVRARYKRNEQTLIRRQKQRSHSVIVDGAESVGKSGAVLRGGTFRFKGNLYFRDDDGRSCPNNGDYDKRCSTEMFPTDFDMRSKHVWTVVDKKNIVMGIKQQLLDHARFQAAAVKKASKNNINERKRKCIDLHAQTLASLLANTDSNFSIDWHQISTLDLEHRHSSYSCEAMWLVYLQPQLKRDDWTPEEDKALLAAAKANKLQNWRAIAAAVGQRSDYQCFVRMQTTLRFHLEPTSAMRWGHEDNERLRAVVQRNTVNGLTNWSQVVEHFPGRSRSTIIGRYMYVLHPSISHAPFTPSEDLMLFAAYEEYNGKFNCFPRTLFPNRSLAQLRTRYNNVLAQRNKTDPWSMDDDTKLMSFVTEHGTSQWVKCANYLGNHTRTSCRTRFLVIKRFLEQHPDATVNDIPRRKAIKNAPVTADNWVQRLQEWQADPDSLITDTAQKPKVKRPKLNSATNGNCLAPLRGIDLNIYEYFKYSYNLKLHGPPTPIPLPRNERNLYVVANALSYMPPATDTQLVQTITLNKQINRCYSKMLRQLPAFETSASAATPLLLPPNWSTMMGFRAICILSVHFRNHAKISTELKLAVSYDESQSAIQLFRQRLRTLFYNTTLLSRLEPTSFEQLPAALMALPRPALCYSLTKKSDPPTSTQHQKQNQQKHESSRNLCGLNAQEIARRQIEEINQLTLSQKKLKSEFKDEPNVKQEMSYE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00476550;
90% Identity
iTF_00599508;
80% Identity
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