Basic Information

Gene Symbol
ct
Assembly
GCA_035045845.1
Location
JAWNOS010000596.1:17697613-17721637[-]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 5.7e-27 6e-23 80.9 0.0 3 72 717 787 715 792 0.95
2 3 5.6e-32 5.9e-28 96.9 0.0 3 77 1229 1304 1227 1306 0.96
3 3 3.5e-31 3.6e-27 94.4 0.0 3 76 1496 1570 1494 1573 0.96

Sequence Information

Coding Sequence
ATGATGCCTTACGAATGTTTGCTAGAGATGTTGATTGGCATTGCGTTTGAGCCTGCAAGCAGTGGCCGTATTAAAGCACTTTTGGATGAGTTGCAACGCCTGCGCGCCTTGGAACAAACTCACCTGGTACAAATCCAGAGGCTCGAAGAGCATTTGGAGGTGAAGCGACAGCACATAATGCGCTTGGAGGCTCGCTTGGATAAGCAGCAGATAAATGAGGCGCTAGCCGAGGCAACGGCATTGGCTGCCGCTGTTAATGCTGCTGCAAcgaacaataacaatagcaacagcaacaacaacaacaacaacaagaacaacaacaatcacagcagccagagcagcgaCAATAACAATGTCGTATTCAAGACAACTGATCTAACATCGACCCATCGGCAcaatgacgatgatgacgatgacgatgacaatGATCACGATAATGAGCTGCGCGACGCCGatggcgatgatgatgatcacCTGCACATGACCaacagcgagcagcagcaacagcaacaacagcaacagcagcaacaacagcattcaGCTTTAGTCAATAATCGCCACGACAACGAGCAGGAGAAGGAGGATGCCGAGGATCACGAAGCCGATATGTCGAATGTCACAGCCACAGCGGAGGGCAATGAGCTGAAAATCAAAAAGGAGCAGCACAGTCCACTGGACCTAAACGTGCTCAGTCCACAGTCGGCGATTGCCACAGCCGCGGCGGCCGCCGCAGCCGCTGCCTGTGCCAACGATCCCAACAAATTCCAAGCCCTGCTACTGGAGCGCACCAAAGCCTTGGCCGCCGAGGCGCTCAAGAACGGCAGCAGCGATGCCGTCAGCGATGAAatgccgcaacaacaacaacaagcccTAGACgtagcaacaacagttgtAGAAGAagatgcagcaacagcagcagcagcagcagcagcagtagcagcagcagcagcagcgccagcttTGCATAAAACTGGCGCGAAAGAGCTTGAGCCATTGGCCGAGGCCAATTTGCAGCCGAAAATCGAAATCTTAGACACAGACGAGGTAATTGCCGAGACAGCAGCTCCAGCCCAAACGTTAGAGGAACAGCTGGTCAATAGCTATTGGAGGCGTGGCTTTGAAACgagcacaacagcagcagcagcagcaacagcagcagcagcagcaactgcagcaacagcaacaacagcagcaacagcaacagcaacagctgcagctgtaacTGCAACTGGGAGCAAAACGCCAACAATTTATCAAAATGCCAATGtggtgcagcagcaattgttgccaccaccgccaccgccacagccacaacagcaacaacaacaacaacaacaacagcagcaacaacaacactatcagcaacaacaacaacagcagcaacaacatggaCCCTCGTCCACTGTGCTGCTCAGTCAATTGGTTAACTCAACTTTCTCACATGCCAATCACTCCTCTTGTTCCAATTCCAAATCCGCACGCCTAGATGCCGCCACACACCACCAgctccaacagcagcaacagccacagctgcagcagcagcaacttctgcacaacagcagcaatagcagcaacagcagcctaACCGGCAGCGATCCGCTGAATCATCACCATCACGCACACCATCATGGCCATGCGCATGGCCAACTGTTGCATACGGCTCACCATTTGCATCATGGCGCCGACTCGAACTCATCCAGCGCCAACAGCACACCGAACAGCACAGCCCAGCTGGCGGCGAGCATTGCCAGCACGCTGAACGGCAACAAGTCGCTGTTGCAGGCAGCGGCCGCCGCCAATGTGGCTGCtgccgccgttgccgttgctgaggacaacaacaacagtctgACACCCAATGCGAACGCGGCTGTGGCCGCAGCAGCGATGGCTGCCCATGCCCAGCATGCTGCCGCCCTGGGTGCGCCCAGCTTTCTGCCCAATTTGCCCAGCCTGCCCTTCCAGTTTGCGGCTGCCGCGGCTGCCGGGCAGGAGGCGCGTGCGCATTTTCGCTTCGCAGACGCtgagctgcaactgcagccgGGCGTTTCGATGGCCGGTCGTTTGGGTGAGTCACTGATACCCAAGGGTGATCCCATGGAGGCCAAGCTGCAGGAGATGCTGCGCTACAACATGGACAAGTATGCCAATCAGGCGCTCGACACACTGCACATCTCGCGTCGCGTTCGCGAGCTGCTCTCCGTGCACAACATTGGGCAGCGTCTGTTCGCCAAATACATATTGGGCCTGTCGCAGGGCACCGTCTCCGAGCTGCTCAGCAAGCCAAAGCCCTGGGATAAGCTGACAGAGAAGGGTCGCGACAGCTACCGCAAGATGCATGCCTGGGCCTGCGATGATAATGCCGTCATGCTGCTCAAATCCCTCATACCCAAGAAAGATTCTGGACTGCCTCAGTATGCTGGTCGCGGCGCTGGCGGCGATGATTCCATGTCCGAGGATCGTCTTGCACACATACTCAGCGAAGCCTCCTCTCTGATGAAGAGCAACGTGGTCGCcgcccagcagcaacagcagcagcaccagcagcagcagcaacaacaacagcaggagcatCAGCGTCGTCATGCCAGCGACGATACGCACAGCAACGATGACAGCAAATCGCCGCCACAGAGCTGCAGCTCGCCCTTCTACAAGGTGGAGCATCAGatcaagcagcaacagcagcagcagcaacaacagcagcagcagcaggcacagcagcaacagctgcatgTCGCCGATCATGCACAGCGCGAGCAACGCGAagcggctgccgctgccgccgccgttgccgtgcaccagcagcagcagcagcagctgcagcagcgcgaGCAGCGCGAACAGCGTGAGGCTGTGCAGcgcgagcaacagcagcgtctGCGTCACGAGGATCTCGCCCAGGACAAGATGGCGCGTCTCTATCAGGAGCTAATGGCGCGCACGCCACGCGAAGCAGCCTTTCCCAGCTTTTTGCTGTCGCCCTTCTTTAGCGGCGCTGCGGGCATGCCTGGCGCAGCGGCCAATCCATTCCCCGCTGCCATGGCCGCCGATGAGAATATGCGTCACGCCTTTGAGCGTGAGATCgtgaagctgcagcagcagcaacagcagcagcagcagcagcaggcgcaggCGCAGGCCGCCAGTTTTCCCAACTTTTCCAGTTTGAtggcactgcagcagcaggtgtTGAATGGCGCACAGGATCTGTCGCTGGCCGGCAAGGATATCAAGCTGAATGGACAACGCTCGTCGCACGATCAgctcagcggcagcggcagcagctccaAGGATGGCGAACGCGGCGATGATGTTGCTGATCGCAGTTTTCCCGCCCTGCCACATGCCCGCAAATCGGATGGTGGCAACACGCCCGCACCACCCGCACCACCAGCCGTCAATGCAGCCGGCAGCGCAACAAATCCAATTGCCGGCGTCTCCGCTTCAAGCGCcggccatggcagcaactcgGCTGCGCCCAGTCCATTGAGCAACTCGATACTGCCGCCAGCGCTGAGCAGCCAGGGTGAGGAGTTTGCTGCCACGGCGAGTCCATTGCAGCGCATGGCCTCCATTACCAATTCGCTGATCACACAGCCACCGGTCACCCCACATCACTCGCAGCCACAGCGACCCACGAAGGCGGTGCTGCCGCCCATCACGCAGCAGCAGTTCGACATGTTCAACAATCTGAACACGGAGGACATTGTGCGTCGTGTGAAGGAGGCGCTCTCCCAGTACAGCATCTCGCAGCGTTTGTTTGGCGAGTCCGTGCTGGGCCTGTCGCAGGGCTCCGTCTCTGATTTGCTGGCTCGGCCCAAGCCCTGGCACATGCTCACCCAGAAGGGTCGCGAGCCGTTCATACGCATGAAAATGTTTCTGGAGGACGAGAATGCGGTGCACAAGCTGGTGGCCAGCCAGTACAAGATCGCGCCCGAGAAGCTGATGCGCACGGGCAGCTACAGCGGCAGCCCCCAGATGCCCCAGGGCCTGGCCAACAAGATGCAGGCAACGCTGCCCATGCAGAAGATGATGAACGAACTGAAGCTGCAGGAGCCGGCCCAGGCACAGCACATCATGCAACAGATGCAGGCAGCGGCTGCCATGTCCGCGGccatgcaacagcaacaggctgCGGCCGCTCAGGCAGCTGCCGTGCAGCAGGCCCAGGCCCAAGCCCAGGCACAGCAGAGCCATCAGCAGCAGGCACAGCAGCAGGCCCAGCAGCAGGCCCAACAGCTGCTCCATCATCAGAATATGCTGCTGACGTCGCCGGGTCTGCCGCCCCAGCATGCAATCAGCTTGCCAGCGGCGAGCACGCCCAGCGGACCGGCGGGCGGTAATCCCACTGCTGTTGCCACGCCCGGCAGCAACGAGAAGAAGCCAATGATGATGCCCGTGCATGGGGGAGCACATGCGCCGAATGCCATGCGCAGCCTGCATCAGCATATGTCGCCGACTGTCTATGAGATGGCCGCGTTGACTCAGGATCTGGACACGCACGATATAACCACCAAGATCAAGGAGGCGCTGCTCGCCAACAACATTGGCCAGAAGATCTTTGGCGAGGCGGTGTTGGGTCTCTCGCAGGGCTCCGTCTCGGAGCTGCTGAGCAAACCGAAGCCCTGGCACATGCTCTCCATCAAGGGGCGTGAGCCCTTCATACGCATGCAGCTCTGGCTGAGCGATGCCAACAATGTGgagcggctgcagctgctcaagAACGAGCGTCGGGAGGCGAGCAAGCGTCGTCGCAGCACCGGACCCAATCAGCAGGACAACAGCAGCGATACGTCCAGCAATGATACGAACGATTTCTATACGAGCAGCCCGGGTCCCGGCTCGGTGGGTTCGTCGGTGGGCGGAGCACCGCCCAGCAAGAAGCAGCGTGTGCTCTTCTCCGAGGAGCAAAAGGAGGCACTGCGCCTGGCCTTCGCCCTGGATCCGTATCCGAATGTCGGCACCATCGAATTCCTGGCCAACGAGCTGAGCCTGGCCACGCGCACCATCACCAACTGGTTCCACAACCATCGCATGCGGCTCAAGCAGCAGGTGCCGCACGGCCAGCCGGGCCAGGACAATCCCATACCCAGTCGCGAGAACACCAATGCCACGCCCTTCGATCCCGTCCAGTTTCGCatactgctgcagcagcgtctCGTCGAGCTGCACAAGGAGCGCATGGGTTTGAGCGGTGCGCCCATACCCTACCCACCGTACTTTGCCGCCGCCGCTCTGCTCGGCCGCAGCTTGGCGGGCATTCCAGGcgctgcggcggctgctggtgcagcggctgctgcggccgcTGCCGTCGGTGCCGCTGGCGGCGATGAGCTGCAGGCACTCAATCAGGCCTTCAAGGAGCAGATGAGCGGACTGGATCTGTCCATGCCGACGCTGAAGCGTGAGCGCAGCGATGACTATCAGGATGAGCTCGAGCTGGACGCCAGCGGTCACAATATGAGCGACAACGAATCCATTGAAGGTGGCCACGAGCCCGAGAATACCACGCCCATATCCGAGTACGAGAAGGCGCTGCAGAAGTCGGCGCTCGCCTCGGCCGCCGCTGGCTACTTGAACAATGCGGTGCGCAGTTCGCGCCGCAAGCCCGCCGCCCCACAGTGGGTGAATCCGGCTGGCGCCAGTACGCCCACAGCGGCGggcgctgccattgctgccatCGCTGCTGGCGATAATAGCGGCAGCGAGCGCATCATCAACGGCGTCTGCATCATGCAGGCCTCCGACTATGGACGTGACGAGGGCGACAGTGTCAAGGGTGGCGACTCCAATGCCGATGCCGAGCACGATGAGCATGCGCATCTGGAGATTGAGCAGCGCTTCATGGAGCCAGAGGTGCGCATCAAGCAGGAGgaggatgacgacgatgaGCAGAcctcacagcagcagcagcagcagcagcagctggacgaTGAGAGCGCCGAGAAGCAGCTGAAGGTGATCAACGAGGAGAAGCTGCGCATGGTGCGTGTGCGACGACTCAGCAGCAATGGCGATGCCGATGAGCACTGCGCTGCAGTGCAGCAGgcgacggcagcggcagcggcagcagcagcagcagctgtagcggcggcagcaactgcgacgccagcagcagcggcagcagcagcagcgtggaACTACTAA
Protein Sequence
MMPYECLLEMLIGIAFEPASSGRIKALLDELQRLRALEQTHLVQIQRLEEHLEVKRQHIMRLEARLDKQQINEALAEATALAAAVNAAATNNNNSNSNNNNNNKNNNNHSSQSSDNNNVVFKTTDLTSTHRHNDDDDDDDDNDHDNELRDADGDDDDHLHMTNSEQQQQQQQQQQQQQHSALVNNRHDNEQEKEDAEDHEADMSNVTATAEGNELKIKKEQHSPLDLNVLSPQSAIATAAAAAAAAACANDPNKFQALLLERTKALAAEALKNGSSDAVSDEMPQQQQQALDVATTVVEEDAATAAAAAAAVAAAAAAPALHKTGAKELEPLAEANLQPKIEILDTDEVIAETAAPAQTLEEQLVNSYWRRGFETSTTAAAAATAAAAATAATATTAATATATAAAVTATGSKTPTIYQNANVVQQQLLPPPPPPQPQQQQQQQQQQQQQQHYQQQQQQQQQHGPSSTVLLSQLVNSTFSHANHSSCSNSKSARLDAATHHQLQQQQQPQLQQQQLLHNSSNSSNSSLTGSDPLNHHHHAHHHGHAHGQLLHTAHHLHHGADSNSSSANSTPNSTAQLAASIASTLNGNKSLLQAAAAANVAAAAVAVAEDNNNSLTPNANAAVAAAAMAAHAQHAAALGAPSFLPNLPSLPFQFAAAAAAGQEARAHFRFADAELQLQPGVSMAGRLGESLIPKGDPMEAKLQEMLRYNMDKYANQALDTLHISRRVRELLSVHNIGQRLFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDDNAVMLLKSLIPKKDSGLPQYAGRGAGGDDSMSEDRLAHILSEASSLMKSNVVAAQQQQQQHQQQQQQQQQEHQRRHASDDTHSNDDSKSPPQSCSSPFYKVEHQIKQQQQQQQQQQQQQAQQQQLHVADHAQREQREAAAAAAAVAVHQQQQQQLQQREQREQREAVQREQQQRLRHEDLAQDKMARLYQELMARTPREAAFPSFLLSPFFSGAAGMPGAAANPFPAAMAADENMRHAFEREIVKLQQQQQQQQQQQAQAQAASFPNFSSLMALQQQVLNGAQDLSLAGKDIKLNGQRSSHDQLSGSGSSSKDGERGDDVADRSFPALPHARKSDGGNTPAPPAPPAVNAAGSATNPIAGVSASSAGHGSNSAAPSPLSNSILPPALSSQGEEFAATASPLQRMASITNSLITQPPVTPHHSQPQRPTKAVLPPITQQQFDMFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDENAVHKLVASQYKIAPEKLMRTGSYSGSPQMPQGLANKMQATLPMQKMMNELKLQEPAQAQHIMQQMQAAAAMSAAMQQQQAAAAQAAAVQQAQAQAQAQQSHQQQAQQQAQQQAQQLLHHQNMLLTSPGLPPQHAISLPAASTPSGPAGGNPTAVATPGSNEKKPMMMPVHGGAHAPNAMRSLHQHMSPTVYEMAALTQDLDTHDITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDANNVERLQLLKNERREASKRRRSTGPNQQDNSSDTSSNDTNDFYTSSPGPGSVGSSVGGAPPSKKQRVLFSEEQKEALRLAFALDPYPNVGTIEFLANELSLATRTITNWFHNHRMRLKQQVPHGQPGQDNPIPSRENTNATPFDPVQFRILLQQRLVELHKERMGLSGAPIPYPPYFAAAALLGRSLAGIPGAAAAAGAAAAAAAAVGAAGGDELQALNQAFKEQMSGLDLSMPTLKRERSDDYQDELELDASGHNMSDNESIEGGHEPENTTPISEYEKALQKSALASAAAGYLNNAVRSSRRKPAAPQWVNPAGASTPTAAGAAIAAIAAGDNSGSERIINGVCIMQASDYGRDEGDSVKGGDSNADAEHDEHAHLEIEQRFMEPEVRIKQEEDDDDEQTSQQQQQQQQLDDESAEKQLKVINEEKLRMVRVRRLSSNGDADEHCAAVQQATAAAAAAAAAAVAAAATATPAAAAAAAAWNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00495757;
90% Identity
iTF_00493543;
80% Identity
iTF_00493543;