Dbus008621.1
Basic Information
- Insect
- Drosophila busckii
- Gene Symbol
- nfxl1
- Assembly
- GCA_011750605.1
- Location
- NC:10081564-10084634[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 2 1.2e+04 -8.1 6.4 15 19 155 159 154 159 0.82 2 18 0.13 8e+02 -0.3 0.4 4 10 190 196 189 196 0.95 3 18 6.5e-08 0.0004 19.8 15.5 1 18 204 220 204 221 0.98 4 18 1 6.5e+03 -3.2 2.7 6 10 247 251 246 251 0.89 5 18 6.2e-08 0.00039 19.9 16.3 1 18 257 275 257 276 0.97 6 18 4.8e-07 0.003 17.0 11.3 1 19 311 330 311 337 0.89 7 18 0.027 1.7e+02 1.8 1.0 5 12 353 360 353 360 0.92 8 18 7.5e-09 4.6e-05 22.8 14.3 1 18 364 381 364 382 0.97 9 18 0.7 4.3e+03 -2.7 0.4 1 5 391 395 391 400 0.73 10 18 0.81 5e+03 -2.9 1.5 5 10 405 410 405 410 0.94 11 18 0.00054 3.3 7.3 16.1 1 18 416 433 416 434 0.97 12 18 3.5e-08 0.00022 20.7 14.8 1 19 443 461 437 461 0.90 13 18 5.4e-05 0.34 10.5 7.2 9 18 506 515 504 516 0.90 14 18 0.25 1.6e+03 -1.2 9.7 1 12 525 535 525 535 0.96 15 18 2.9e-06 0.018 14.6 6.9 1 12 601 612 601 612 0.96 16 18 0.0065 40 3.8 15.4 3 19 641 657 632 657 0.88 17 18 1.7 1e+04 -3.9 1.6 8 13 662 667 661 667 0.74 18 18 1.7e-06 0.011 15.2 10.3 1 16 708 722 708 728 0.92
Sequence Information
- Coding Sequence
- atggaAAAGTTTAACAAGGCGCAACAAAAAAACTTAGCGGCCGCTCAGAAGTTGGTGGAGGCATATGCCTCCAGCTCCGAGGATGAAGGCGAGCTTGACGAAAAACACATACTCGATCTGCTCTATAAGCATTATCAAAGCTTGCCGCAAGGAGCTGGTAAAGCTACgggaaataaacaaaatgataaTAATGCCAATCGCACTGCTACATTTCTGGAAAACACATTGCACTCCGGTGCTGCGACATGCCTAATCTGTATAGGCAGCATACGGCGTGTAGAGTCCATTTGGTCGTGTAAAAGTTGCTACTGCTTCTTTCATCTCAATTGCATTCAACGCTGGGCAAATGACAGTGTCATGCAAATGAAAGTCAAGGCCGAACAGCAGAACGGCAATCAAGGACACTACAACCATTTGGGCGAGTATGTGCCGGCAAAGCGTCAGAAAGCTGCACACTGGTGCTGTCCGCAGTGCCGTACTGAGTACCAGCCAACGGAGCGTCCCACGCAGTACGAATGCTTCTGTGGCAAGGAAGTCAATCCGGCACAACAACCATATCTAGTGCCACACTCTTGTGGCgaaatttgtggcaagctaCTGCAGCCAAAATGTGGTCACGATTGCAAGCTGCTTTGTCATCCGGGTCCGTGCCCACCGTGTGCCCAACTGGCCAACAACTCTTGCTTGTGTGGCAAATCTCCTGCACGATCAGTGCGATGCCTTGATAAAAATTGGCAGTGCCAGCAAACGTGTCAGACGCTTTTGTCGTGTGGCAAGCACAAGTGCAACCAAAAATGCCATCGACGTGGCCAATGCCCGCCTTGCAATAGTCAGAGCTCTCAGCCTTGTAACTGCAAGCGTGAGGTGAAAGTTGTTAACTGCTCACAGCCCAAATGGCAGTGTACTAATGTTTGTGGCGCGCTTTACAACTGTGGCCAGCATAAATGCGAGAAGATCTGTCATTCAGCAGATTGTGGCGGCGACTGTCCCTTGAGTGTGCGCAGCTGTCCTTGCGGCAAGAGcAAAAACGCAAGCGGCTGTAATGAGGAGGTGGAAACTTGTGGCGACACGTGCCACAAATTGTTATCTTGTGGCAATCACACTTGCACGCAACGTTGTCATCGCGGGCCTTGCAACCAATGTCTGGTGCGTACCACAAAAAAATGTCGCTGTGGCCTGCATGAGAAGGAGCTGCCCTGCTCCAAGGAGTTCACATGCGAGGCCAAATGCAAGCAGATGCGGGACTGTGGCAAACATGCTTGCAATCGTAAATGCTGTGGCTATCAGTGTCCACCCTGCGAAAAGATTTGCGGAAAGCAATTGAACTGCAACAAGCATAAATGTCAATCGGTCTGCCATAATGGCCCGTGTTATCCCTGCAAATTAGAATCTCAGGTCAACTGCCGTTGTGGTAAAACTCGACGCAGCGTGCCCTGCGGTCGTGAGAGAAGCGCACGCATCGCTTGCATGGAGCTCTGCCGAATAAGCTCCAAATGCCATCACGCCGTCAAGCATCGCTGTCACAAAGGCGAGTGTCCGCCTTGTGCACAACCTTGtggacaaacaaacaaatgtggTCACATATGCAAAGCACATTGTCATTCAGCCATCAGAGTAAACAAAACTGCAGACGCCTCAAATCGGGCTGCGGCAAAGAAGTATGAGTATCGACCATTGCCGCATCCACAATGCGAGGAAGGCGTCAGCGTTAGCTGTATAGGTGGACATGAGCTAGCTACCTGGCCCTGTTGGAACTCCAAACCATCCTCCTGCGCTCGGAAATGTGCGCGCCAATTGCGCTGTGGCAATCACAAATGCCAGCTTGTCTGCCACACTGTACCAGATCCGCAGAGCATGCTGCAGCAAGTGGGTTGTGCTAATTGCGAGCAAGGCTGTGGCATAGCTCGTACCAAAGGATGCGAGCATTCTTGCAACAAAGGCTGTCATCCACCGCCCTGTGCGCCCTGCAGCTTCGttatcaaaagcaaatgccacTGTGGCCTTAATCAGATTATCTATAAGTGCCATGAGCTTTACAATGATGTGgatgaagagcagcagctactggaGCGTGGCGAAAAGTTGCGTTGCTGCGGCAATCGTTGTCTAAAGAATttcgCCTGTGGTCATCGGTGCATAACTATTTGTCACTCTGGCAAGTGTCCCAACCCGGAGCTGTGCCGCAAGAAAGTGCGCATTTATTGCGCCTGCAAGCGGCTTAAGCAGGAGATTGCATGCGACAAGCATCGAGCAGGTCAAACCTCACTAAGCTGCGATGACAACTGTCAGGCTGAGCGTGCCAAGGTTGAGGCTacggaacagcagcagctggcgcgtAAAAAACAATTGGAGGAGGAAAAGAATCGCATCGAGCTTGAAAAATTCCAGCAGAAATTTGCCAAGCGCAAGCCTAGAGAACGCAAGACCATTGAAGTGGATCTTGAGCGCAGCAAGATAGACTGGCAACGTTGGGCCAACTACAGCGTAGCGCTGCTCTTGGTGTTAGGAGCGCTAGGTGTTGCTTACTATGCAGACAGCTAA
- Protein Sequence
- MEKFNKAQQKNLAAAQKLVEAYASSSEDEGELDEKHILDLLYKHYQSLPQGAGKATGNKQNDNNANRTATFLENTLHSGAATCLICIGSIRRVESIWSCKSCYCFFHLNCIQRWANDSVMQMKVKAEQQNGNQGHYNHLGEYVPAKRQKAAHWCCPQCRTEYQPTERPTQYECFCGKEVNPAQQPYLVPHSCGEICGKLLQPKCGHDCKLLCHPGPCPPCAQLANNSCLCGKSPARSVRCLDKNWQCQQTCQTLLSCGKHKCNQKCHRRGQCPPCNSQSSQPCNCKREVKVVNCSQPKWQCTNVCGALYNCGQHKCEKICHSADCGGDCPLSVRSCPCGKSKNASGCNEEVETCGDTCHKLLSCGNHTCTQRCHRGPCNQCLVRTTKKCRCGLHEKELPCSKEFTCEAKCKQMRDCGKHACNRKCCGYQCPPCEKICGKQLNCNKHKCQSVCHNGPCYPCKLESQVNCRCGKTRRSVPCGRERSARIACMELCRISSKCHHAVKHRCHKGECPPCAQPCGQTNKCGHICKAHCHSAIRVNKTADASNRAAAKKYEYRPLPHPQCEEGVSVSCIGGHELATWPCWNSKPSSCARKCARQLRCGNHKCQLVCHTVPDPQSMLQQVGCANCEQGCGIARTKGCEHSCNKGCHPPPCAPCSFVIKSKCHCGLNQIIYKCHELYNDVDEEQQLLERGEKLRCCGNRCLKNFACGHRCITICHSGKCPNPELCRKKVRIYCACKRLKQEIACDKHRAGQTSLSCDDNCQAERAKVEATEQQQLARKKQLEEEKNRIELEKFQQKFAKRKPRERKTIEVDLERSKIDWQRWANYSVALLLVLGALGVAYYADS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -