Dbus010970.1
Basic Information
- Insect
- Drosophila busckii
- Gene Symbol
- stc
- Assembly
- GCA_011750605.1
- Location
- NC:7952241-7956278[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 1.4 8.5e+03 -3.6 0.5 15 18 314 317 313 318 0.79 2 15 1.9 1.2e+04 -4.0 1.6 15 19 341 345 340 345 0.81 3 15 0.075 4.7e+02 0.4 2.3 4 11 374 381 373 382 0.91 4 15 5.6e-07 0.0034 16.8 15.1 1 19 386 403 386 403 0.93 5 15 1.8 1.1e+04 -3.9 1.2 6 10 429 433 428 433 0.87 6 15 1.1e-07 0.00065 19.1 14.0 1 18 439 456 439 457 0.98 7 15 2 1.2e+04 -4.2 2.1 7 13 461 467 461 468 0.76 8 15 1.9e-09 1.2e-05 24.7 12.9 1 19 497 515 497 515 0.98 9 15 1e-05 0.063 12.8 15.5 4 19 563 578 556 578 0.88 10 15 0.28 1.7e+03 -1.4 12.5 1 11 618 628 618 640 0.79 11 15 4.5e-10 2.8e-06 26.7 15.5 1 18 645 662 645 663 0.97 12 15 2 1.2e+04 -4.3 1.2 6 10 692 696 692 696 0.88 13 15 2 1.2e+04 -5.2 8.2 10 18 710 719 702 720 0.79 14 15 2e-08 0.00012 21.5 12.8 1 16 756 771 756 778 0.88 15 15 2.1e-05 0.13 11.8 13.5 1 19 788 807 788 807 0.96
Sequence Information
- Coding Sequence
- ATGGCGGAgtattggcaacaacaacagcagcaacagccacagcagcagcaacagcaactcagcAATGGGTCAGCAGTGCGCGCTGATGGAGAAACAGCGTCAACTAGCAATGGCCATAcccacaataacaacaactatgtAAACTTTAATCAGTTTATCACGCAACACAATCTGAACACTGCTAACGGCATGTTTGGAGtggcagcaaccagcagcagcaatagcgcTGTTAACTCACCTAGCTATAATGGTAGCACAAGCGGCTGTGATTTTGTAGGCCTGTACTCGCAGTCTTATTATGGCAATCaaggcgctgcagctgccagcgGTAGCACAAGCTACTTAAATAGCAATCCTTTTGCTGTAGGAGGCACAGGCTTTGATTTAAGCGCTTCCAAGCTGCAGGCCACAGCTCCTGAATTTGTGCCTAATTTTGCCAAACTCAGTCTGGCGCCCACAACAAGCTCgaccaacaataataacaacagttACACTGCCATGCAATCCAATGGTGATGCACACAAGCAATCGccgcaacatcaacagcagctgcgtgcaccaaagcagcgacagcagcgacgccaggaCTATCGTGAAGAGCGACAGGATGAGCGCTATGAACGCAGTAAAAAGCCCCAGAAGCAACAACGCTATGATAATCATCGAAGTAACAAACGACGCGATGACTGGAATCGCAATCGTGATCGTATTAACGGCTTTGCGCGCACCGCTGAGGAGCTGGACACCAGCAACAGCGCCGACAGTGCTCAACCCTCGCCcgagaagcagcaacaacaaccgaaACAAATCTCGCCCAGACGTGCGCCGGAGCATGAAAAGCTGTCACAGCGTGAGAAGCTTATGCGCGACATTGAGCAACGTCGCTTGGAATGTTTGGTGTGCGTGGAGCAGATAAAGGCGCATCATGGCACCTGGTCGTGCCAGAACTGCTACCATGTGATGCATCTCAAGTGCACCATAACCTGGGCAAGCAGCTCCAAGTCTGCAAACGGTTGGCGCTGTCCCGCCTGCCAAAATGTGCTGCAGGATGTGCCACGCGACTATCTTTGCTTTTGCGGCAAGTTAAGGAATCCTCCGCTAAATCGCACGGAATTGCCACACAGCTGTGGCGAGTTGTGCTGCCGCATAGAATTGTGCAGTCATGCATGCACGCTCCTGTGCCATCCAGGCCCGTGCCCGCCGTGTCAGGCGAATGTAAGTcgcagctgtggctgtggACGTACGACAAAGATGGTGCAGTGCGCCCTTAAGCAGCCGCTGGAGTGCGAAGACACCTGTGACAAGTTGTTGAACTGCGGCGAGCATCGCTGCAAGCTGCGCTGCCATCCAGGCAAATGCGAGCCATGTGCAgatcaagtgcagcagcagtgtcACTGCGGCAAACAGCAGCGTGAGGTGTTGTGCACCAAGGAGAGTCTGGACAAGCGCAACTATTCTTGCAAGGAATGCTGTGGCAAGCCGCTGCCTTGCGGCAATCACAAATGCAAGGACTCCTGCCATGCGGGCGCCTGTCGTCCCTGCAAGCTGAGCCCTGCACAAATCACCAGCTGCCCATGCGGCAAACTTCCTGTGCCGTTCGAGCAACGCAGCAGCTGTTTGGCCCCGGTACCCACCTGCGAGGGTATTTGCAGCAAAACGCTGCGCTGCGGCAAAGCGGCACATCCGCATCAATGCGCTAACAAGTGTCACCTGGGCCAATGTCCGCCCTGTCCCAAGCAAACTGCAGTCAAGTGTCGCTGCGGTCACATGGATCAACTCATCAAATGCCGTCAGCTCTCCACGCGCGCCGATGATGCGCGCTGCAAACGTCGCTGCACTAAGAAAcgcagctgtggcaagcaTAAATGCAACACGGAATGCTGCATTGACATTGATCACGCCTGTCCACTTCCATGCAATCGCACCTTAAGCTGTGGCAAACATAAATGCGATCAGCCCTGCCATCGCGGCAATTGCCCGCCTTGCTATCGCAGCAGCTTCGAGGAGCTCTTCTGCGAATGCGGCGCTGAGGTCATTTATCCTCCCGTGCCCTGTGGCACCAAACGACCGCTCTGCAAGCGTCCCTGCTCGCGCACACATGGCTGCGCACATGCGCCTCAGCATAACTGCCATGCCGCAGCCAGCTGTCCGCCCTGCATGATCTTTACCACCAAATGGTGTCACGGCGCGCATGAACAGCGCAAGACTATACCCTGCTCCCAAGCCAGCTTCAGTTGCGGTCTTCCGTGTGGCAAGCCCTTGGCCTGTGGACGTCACAAATGCATAAAGCCCTGCCACGAGGGCGACTGCCAGCAACCAGGCGAGGTCTGCCGTCAGAGCTGCACACGTGCGCGTCTGCTATGCGGCCACAAGTGCGCGGCGCCTTGTCACGAGAACGACTGTCCGGAAACGCCTTGCAAGGAGCTTGTCGAGGTGCAATGCGATTGCGGCAATCGTAAGTTGAACCGCAGCTGCCAGGAGCTGGCCCGTGAGCACAGTCGCATCGCCACTGCCCAGTTGGCCTCATCCATGGCGGAAATGTCGCGTGGTAACTACATGGAGCTCAGCGAGATTCTAGCGCCCAACAAgggcaacaaagcaaataagtCCTTGGACTGCAATGATGAGTGTCGTCTGCTGGAACGCAATCGCCGCCTGGCCATCGGTCTGCAGTCGCGTAACGCAGAGCCGCAGCTTAAATCGCTTACCAGATACTCGGAGTTTGTGCGTGGCTTTGCAAAACGCAATTTACCGCTCACCAAGAGCGTTTACGAGACGCTCAGCGATTTGGTGAAGCTGGCCAAggaaagcaagcaaaagtcgCGCAGCCATTCGTTTCCCACTATGAATCGCGAAAAGCGTCAATTGGTACACGAACTATGCGAGGTCTTTGGGGTCGAGTCTGTCTCCTATGACAAAGAGCCCAATCGCAATGTGGTGGCTACAGCTCACAAGGAACGCTGCTGGCTGCCCGCCACTAGCATCATGGAGGTGCTTGCACGTGAATCCGGACAGCGTCGTGTGCCGGTGCCAAGCAATAACGCTTGGGGTTTGAAGAAATAG
- Protein Sequence
- MAEYWQQQQQQQPQQQQQQLSNGSAVRADGETASTSNGHTHNNNNYVNFNQFITQHNLNTANGMFGVAATSSSNSAVNSPSYNGSTSGCDFVGLYSQSYYGNQGAAAASGSTSYLNSNPFAVGGTGFDLSASKLQATAPEFVPNFAKLSLAPTTSSTNNNNNSYTAMQSNGDAHKQSPQHQQQLRAPKQRQQRRQDYREERQDERYERSKKPQKQQRYDNHRSNKRRDDWNRNRDRINGFARTAEELDTSNSADSAQPSPEKQQQQPKQISPRRAPEHEKLSQREKLMRDIEQRRLECLVCVEQIKAHHGTWSCQNCYHVMHLKCTITWASSSKSANGWRCPACQNVLQDVPRDYLCFCGKLRNPPLNRTELPHSCGELCCRIELCSHACTLLCHPGPCPPCQANVSRSCGCGRTTKMVQCALKQPLECEDTCDKLLNCGEHRCKLRCHPGKCEPCADQVQQQCHCGKQQREVLCTKESLDKRNYSCKECCGKPLPCGNHKCKDSCHAGACRPCKLSPAQITSCPCGKLPVPFEQRSSCLAPVPTCEGICSKTLRCGKAAHPHQCANKCHLGQCPPCPKQTAVKCRCGHMDQLIKCRQLSTRADDARCKRRCTKKRSCGKHKCNTECCIDIDHACPLPCNRTLSCGKHKCDQPCHRGNCPPCYRSSFEELFCECGAEVIYPPVPCGTKRPLCKRPCSRTHGCAHAPQHNCHAAASCPPCMIFTTKWCHGAHEQRKTIPCSQASFSCGLPCGKPLACGRHKCIKPCHEGDCQQPGEVCRQSCTRARLLCGHKCAAPCHENDCPETPCKELVEVQCDCGNRKLNRSCQELAREHSRIATAQLASSMAEMSRGNYMELSEILAPNKGNKANKSLDCNDECRLLERNRRLAIGLQSRNAEPQLKSLTRYSEFVRGFAKRNLPLTKSVYETLSDLVKLAKESKQKSRSHSFPTMNREKRQLVHELCEVFGVESVSYDKEPNRNVVATAHKERCWLPATSIMEVLARESGQRRVPVPSNNAWGLKK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -