Basic Information

Gene Symbol
F54F2.9
Assembly
GCA_011750605.1
Location
NC:5142860-5145293[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 9.3 7.7e+03 -3.4 0.2 4 12 27 35 26 44 0.60
2 3 1.6e-07 0.00013 21.5 0.0 4 38 308 345 305 346 0.86
3 3 1.4e-08 1.1e-05 24.9 0.2 3 43 396 441 394 443 0.81

Sequence Information

Coding Sequence
ATGCAGCTGTATAGCCTGACAATGCTGCCAGTGGCCACGCTGCTTGGCCTACTGCTGCTCTGTGGCCCAACGCACGCGTGGCACTCGGAGGAATTGGAAATATTTGACTTGATCGAAGAGGTCAACAAGAATTTTTACGAATTCATgggcataaatcaaaatgccaCGAATAATGAGATAAAGCGCGCGTTTCGTACTCTGTCCATTGTGCTGCACCCGGACAAGAGCAACGCTGAGGATGCCAACATACAGTTTCGAAATTTAGTCTCCATCTATGAAGTGCTGAAGGATGGCTCCAAGCGTGAGAAGTATGACAAGGTTCTGCGCGACGGCATGCCCAACTGGAAGTCTGCACTCTATTACTATCGTCGCATGCGTAAAATTGGCCTATACGAGGGCGCTTTTATTCTTTTCCTCATCATCACTGTGGGCCAGTATCTCTTCGCATGGGCAGCTTATCTAGAGAAGAAGTACACCGCCGAGCAAGTGTTTGGCACCAAGCTAAAGAAACTGCAAAAGCGCAATAAAAACATTGATATGGATGTCATACTAAGCGAAATACCTTTACCATCCATGCTCAATACGCTGCCATTCCAAATACCAATggccatttggcatttgcccGGAACCATAAAGAACTTTTTCAGCAAGGCCAATGAACTTAAGGAACTGGCGCTAGAGAAGCGCAGGCAAGAACTGGAGGCTGCTCGCCGGCAAGAGGAATTGGAGCGAGAGGCGGAGGAGCAGGTACGCTTACGCAAAGAACATAAAGAAAATTTGCGCAAGCGTAAGCAAAATACCAAAGCACCAGAAAAAACAGAAGAAGAGTTGCGTGGTTATTCCCAAATACAGGCACGTGAACTAACCGAGGATGATGCCATACGGCCGGCAACTCAAAAGAGCACCGTCAGCGGCGGCTTCTGGACGGACGAGGATCTAACTGAGCTCATACGCTTGGTTAAGAAATATCCAGGCGGTGCGGGCAGTCGCTGGAACACCATAGCCGAGGCCATGAATCGGAGCGTGCAAGAGGTTACATTTATGGCGGCAAAGATGAAAGAGAATGGCTATCGCATACCAGGACAAACGGACAGCGTGGCTGAAACCATTGTGCAGGAATCACAGCAGGCGGTGCGCAAGGAGAAAGTAAAGAAGGGAGAGAAGAGCATGCTCATACCAGAGACCAACTGGtcgcaggagcagcagcgcgcCTTGGAGGCGGCAATTGTCAAGTATCGCAAAACAGCTGGCGGCGATCGTTGGCAAAAGATTGCCAACAGCGTGCCGGAGAAGACCAAAGAGGAGTGCCTAGTGCGCTACAAATATCTTTGCGAGCTGGTGAAAACGCAAAAGAAAGCAGAGGAGGAAAATGCTGAAGATGAGCTGGGAGAGGAAAACAACACTGCGGCGTCAGAGACAGAATCGCTGCATGTAGAACCAGAGCAACCAGAGCCTGTGGAAGCGGCAGCCACTAAAAAGCTTAGCAAACGCGAGAAGCGCCGACGCAAACGTGACATGTCCAGTGACGAGGACTCAGATGATGCATAG
Protein Sequence
MQLYSLTMLPVATLLGLLLLCGPTHAWHSEELEIFDLIEEVNKNFYEFMGINQNATNNEIKRAFRTLSIVLHPDKSNAEDANIQFRNLVSIYEVLKDGSKREKYDKVLRDGMPNWKSALYYYRRMRKIGLYEGAFILFLIITVGQYLFAWAAYLEKKYTAEQVFGTKLKKLQKRNKNIDMDVILSEIPLPSMLNTLPFQIPMAIWHLPGTIKNFFSKANELKELALEKRRQELEAARRQEELEREAEEQVRLRKEHKENLRKRKQNTKAPEKTEEELRGYSQIQARELTEDDAIRPATQKSTVSGGFWTDEDLTELIRLVKKYPGGAGSRWNTIAEAMNRSVQEVTFMAAKMKENGYRIPGQTDSVAETIVQESQQAVRKEKVKKGEKSMLIPETNWSQEQQRALEAAIVKYRKTAGGDRWQKIANSVPEKTKEECLVRYKYLCELVKTQKKAEEENAEDELGEENNTAASETESLHVEPEQPEPVEAAATKKLSKREKRRRKRDMSSDEDSDDA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00616831;
90% Identity
-
80% Identity
-