Dbus008523.1
Basic Information
- Insect
- Drosophila busckii
- Gene Symbol
- -
- Assembly
- GCA_011750605.1
- Location
- NC:1315070-1316975[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 8.8e-17 1.6e-13 49.6 0.0 2 45 363 406 362 406 0.95 2 3 0.039 68 2.8 0.0 28 37 436 445 435 450 0.90 3 3 2.1e-19 3.6e-16 58.1 0.0 2 41 472 511 471 513 0.96
Sequence Information
- Coding Sequence
- atgAATCACCTCAAATGGATGGGGCACACGTCCACCATAATGGATATACAACGCGTGCTGCTCAATCAGCAAAGCCACAATCAGAGCTGCGAGGTAATGCTGGTGGCCAAAGACGGCGTTAGCGTGCGGGCGCATCTCTTCGTGCTGAGCACATGCAGCGACTTAATGCGTAACTTACTGGTGGATTTGCCTGTTGGCCAGGAGGCCACAGTTATACTTCCAGACATACGCGGTGAGCTGCTGGAGATCATGCTATCGTTTATTTATATGGGCGAGACCAGCTTACCTTCAGCGCTCCTCACCGATTTCTTGGAGGCCATCAACCTACTGGGCATTAAGTCAGCCATAAGTTTCGAAACCAATCCTTCAGCTATGAATACGTCTAGTGTTAGCGGTGCCATGGCATTGGAGAATGCCAAATCCATATCTGGCTTGCATATTGCCAACTCTGCGCTTATGgaggaagaggaggaggatgaTAGTAATGCTATGGTGGGTAAGCTGGAAGTTGCAAATACTGTGGAGCAGGAGCAGACAGCTCGACCCTTGGAATTTCTAGACGTTTATGGCGATACACCTAAGATAACATACTCCATAGAGCATATGAGTGGCAGCGCGTCTGGCAATCAATATATTCTAACCGAAAGTACGGGCACATATACCATAACACAATCCGCAGCACCGCTGACCAAGCTAGAGACGGCAGTGGTGGCGCATCCGGAGCATCCAGTGGTCAGTGCCAGTGCTGAGCTGCAAGAGGATGAAGCTGAGGCAGAAGTAACTGACGATCATGAAGAGTCCGAATCGCAGATCATTGAAGAAGAGTATGTGCCAGCCGATCCCATGACAGACATGGGCACCGATGCAGATGTGGATATGCATGATGAAgaggaagaggaggaggagcaggaaATGTTGAATGTCAAACCACGCAAAATGGAACTGGATGTAAAAGTACTCAAAAGCAGACCACGGCAACGTGCCACAGCCGCCGCAGCGGTAAGTACACCCAAGTGCGTCAAGAAAACCATGTCaaagcaacatcaacaatttGCTGAGCTCAAAAAGGAAATCAAAGAGGATATTAACGATGCACTTGATCTCGCCGCCGATGCGGTGCTGCACGAAGGGTTAAGCCTACAAAAGGCCGCGGATCGCTATGACATATCCAAGACAGTGCTCTGGCGAAGGGTGCGCTCCAATCCCGCCTATATGAGGATCAAACGCGAGAAGCCATCGCTTTCTGAGGCATACGAACGCCTGAAGAATGGCGATTCACTAAAGAGCATAAGCCAGGATCTGCACATACCCATGTCAACGCTGCATCGACACAAGGTGCGTCTTGCGGCACAAGGACGTTTACCCGAGTTTGTTGCCTGTCGACGGCGTGACAGTACTCCGAAGGACGAGCTCCGTGACAAGTTGGCCAAGGCGGTGCATGCCTGCATCAACGATGGCATGTCACAGAATCATGCGGCCAATCTCTTCGAGATACCCAAGAGCACACTTTGGCGACATCTCCAGCGTCACGTCGCCGAGGCGGAACAAAAAATCAAGGAGGAACTTGAAAAGGACGACGATGCAGAACTTAATTAG
- Protein Sequence
- MNHLKWMGHTSTIMDIQRVLLNQQSHNQSCEVMLVAKDGVSVRAHLFVLSTCSDLMRNLLVDLPVGQEATVILPDIRGELLEIMLSFIYMGETSLPSALLTDFLEAINLLGIKSAISFETNPSAMNTSSVSGAMALENAKSISGLHIANSALMEEEEEDDSNAMVGKLEVANTVEQEQTARPLEFLDVYGDTPKITYSIEHMSGSASGNQYILTESTGTYTITQSAAPLTKLETAVVAHPEHPVVSASAELQEDEAEAEVTDDHEESESQIIEEEYVPADPMTDMGTDADVDMHDEEEEEEEQEMLNVKPRKMELDVKVLKSRPRQRATAAAAVSTPKCVKKTMSKQHQQFAELKKEIKEDINDALDLAADAVLHEGLSLQKAADRYDISKTVLWRRVRSNPAYMRIKREKPSLSEAYERLKNGDSLKSISQDLHIPMSTLHRHKVRLAAQGRLPEFVACRRRDSTPKDELRDKLAKAVHACINDGMSQNHAANLFEIPKSTLWRHLQRHVAEAEQKIKEELEKDDDAELN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00493059;
- 90% Identity
- iTF_00493059;
- 80% Identity
- iTF_00493059;