Basic Information

Gene Symbol
Arid2
Assembly
GCA_011750605.1
Location
NC:20612918-20618766[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.5e-24 3.1e-21 75.0 0.0 3 89 78 162 76 162 0.92

Sequence Information

Coding Sequence
ATGACGTCCATTGAAAATAATGTGCGGAATCTGCTGCAAACACTGCCAGCGCGTGCCGAGGGTAGCAGCATGCAGTTGAATGAAATTACAATGACGCCGGGAAAACTTGGAGCTACCCCAATTCCGTTGCGCGCGAGAAatccgcagcagcaacaacagcagctgcaggcccAGCAACAGTTATATTTCAGTACGCCTGgtaaaacagaaaaaaatagcGACAATGGTGCAGAGGAATTTTGGCGTGATTTGCATCAGTTTCATGAAAGACGCGGCACGCCTTTAACCCAGGCGGCCAAGATCAGCGGACAGCGTGTAGATTTATATCGTCTTTACCAAGAGGTAACAGAGCGTGGTGGCTTCAACAAGGTGAACATGCGGGACGAGTGGGATGAGGTGTTTAGCGCATTGGAGAGCATTCGCCAGTGTGTGAATGGCACAGCAGGCATTAAGCACATATACCGACGCTACTTGGACAAGTACGAGAAATTAACATTCTTTGGCGAGGATCCGGACAAGCTGGAGGCCCTAGAGGCAGCCATAGAGTGCGCAGATGTGGGTATGGGGCGCTCACGCTCTCGCGCTTTGGGCGGAGGCAGCGGCGgtgttggcagcagcgctcTAACAAGCAGCGGCCTAGGCGGCATTTTTGGCCATGCCCACTCAACACTTACGGCTGTGCCCATGGCCTACAATCACCGCCAGCACGTGGTCAATCTGGAGCGTAGACGTCAGCATAAAATGTCCACACAGCTGCACAAGCACAGCAACTATGAgaagctgttgctgtcgctgctctcACCGCTGCCCAACGAACAGGACTTTGCCATCAATGTGTGCATGCTGATGGCCAATGAACCGCGTACCACGCTGCAGCTCATGGAATGCCCCAAGTTGCTGGATGTGCTGTTGGCACACCTGGGTGTCTATGCGGACTATAGTATGCGTCAGCTATTCCAACAAGGCGCACCCCAGGGGAAGCGTCATGCTAAGTTGCACTTTTGGCAGGATTTGTTGTACGAAAAGCCGCAAATCTTGGAGCTTTATACGGATGAGCAGGCCTGGCAGGAGAATGGCTTAATAAGCAAGGAGATGGATGAGCCCGAACCGCTGCCGCTGGACGAACTGCAGCTAGACTTTTTGAATTTGCGACGCAGCTACGGCACGGACGAGCGTGTGGGTCAACGCGTGCTTCAAATTGTGCAACTGCTGCGCAGTTTAAGCTTCCAACAGGAGCATGTTCAGCTTCTGGCAAGTAACCGCACACTCTGGCGATATTTGGTTATGGCCGTTAATGTACGCTGGAgcaacatacacatacaagcCTTGGAGACGGCGGGCAATATGGCGCAGCAGTTTGAGCTCCTGGATCCGGCTACGGATGAATTGTCGCGCAATCTTTTGGCCACGCTCTGCGAGGGCATCGAGTCCAACGATCGCGCGGTTATCATCAGCTGCCTGGAGATACTCTACAAGCTCTGCGCCCGCGAGGGCAACGCTCAGCATATAAATCGCTGCCTTGGCTTGGATTTCTATCAGCGCGTCATGCTCCTGCTTTCACTCACCGATGTCATGCTGCTCATCTTTACGTTGGAGGCAATTTATGCTTTGAGTTCGCTGGGCGCGCGTCCATGCTCCATGCTGATGCAAGTGCGTGGCTTGCTGGATCAGCTGGTGGCTCTATTGACGGTCGAGGCGCAGTCCTATGGCGCCGCGGGCTGCATATTGATGCGTGTGGTTGAGGTGGTGCCGGGCAACATGTTGCCCACATTGACACAGGGCGCGCAGCTTACACAGATGGTGCCAGCAAAGATAGcagcaccgccgccgccgtcagTGCAGACACCGGCACCATTACTGCAGTTCCACGTGTTGCCTGCGCAAGTTGAATCCGCTGCCGTGACTGCACCACCAACAGTAGCTGCAACTGCACCTCCGCTCCAGCTCTCAGCTCCAGTCAGTCTGCCTCAAGCTCAATTGCCACCAGTAGCAGTGGCTCCAGCTCCCGCTCCCACTCCCGCATCTGCTCCAGCTATGCCTATTCTACCACCTGCGCCTTCTGCACCACAGAGCTTTACACATGAGGATGAAACCTATGCCTTGGCCTGGCTCGGTGCAACCTATGAGCGCGCTGGCATTGGCCATGAGAATCGCGTCGAGCAGCAGGAACTCTATACCATTTACTTGTCGCACTGTCAGAAGGCGGGCAAGCACTCTGTGGTAAATCGCATGCAGTTTCCACGATTGGTGCGGCTCATCTTTAACCCCAGCGTGGGTCCAGCCATAGTGCGTCAGCTGGACGGCACCGATCTCCCAGGCACACACTATGTGGGCATTCGCATGCGAGcacagccgctgccgctgcaacagccacaacaacagcagcaacagcagcagcagcagcagcagcatcaagtgCAAGTCCAAGCCAAGCTGCAAACTGTGCGAAAGGACATACCACTGGGTACCACTGGGGAAGCCACGCCCTCAGCTGCTGTGGAGGAGGGATCAGCAGCTGGATCGGCTGGCACGGCTCCTAGCTCCTCGCTCATCAAGAGTCTGCTGGCCAACAAAGTAAATGAGCGTCAGCAGAAGCAGAAGGCGCAAGCACAGCCACCCGCACTCGTGGCCACCACTAGCTCCAGCTCGGCTAGTAGTCAGCCTATCAAGGTGACCTCCACCACAGCCATAAGCGCCTTTGTCAACAATCCGCTGATGCAGCATACGCCCGTCAAAGTGGGTCAGACCACCATTAAGCCGCTGCATCCACAACTATCGCTGGAGAAGAAGCCGTTGAGCGATtcggcgccgccgccgctggcaCCGCTAAGTGGAGCCAATGTCAAAAAGGATCCGCAAGGACGCACGCTGATCATACAAGCCAAGCGCAAGCTTACAGTGGATGAGGAGCTGCACAACAAGCGGATGGCCTTGGACAAGGAGGCGGAGACGCCCGTAACGCCGTCGAAAAATGCAGCGAACCTTTATGCAGATCTGGCTGCCTCTATTCTCGAGGATGAGGATTTGGATGATGTGCCGCCgttggcaagcagcagccaggagCAAGCCGCACCGTCTacgccgcagcaacagcagcaacaacaacagatgcAGCTTATGCCTGGCAAGATGCAATCTGGTCCGCGTCAAATTTTACTGCCTGCGCCGCCACCAACACCACAACTTAAGCTGGCCACGACCACAGCCACCATTAAAACGGATCAGGGATTGCAAACAGTGCCGGTTATACTTGCGCCAAAAACGGAGGCAGCCAGTCAGTCTCAAGCCCCAACGCAGACGCAGTACGTCCTGGCCACCAATCAGCAGGGACAAACGTATTTGGTGGCGCAACAAACGCCCACGGTGCCGGTGGGCCAACCAGCAAGTGCTCCACCCACGTTGCTGGTGACGCAGGCGCCGCAGCAACAGACCAAGACCATCATCatactgcaacagcagccagggGGCGGAGTAGGCGCAACCAATGTGCCGGGCACGCAAAAGGTCTACATGACCACCTCCTCAGGTCAGCCGTTGCTGGTGACTACCACCACAGGAGGTGCGCAGCCACGGCCAGGAACTCCCGCGCAAgccacacagcaacaacaacagcagcagcagcaacaacaacagcagcagcagatctTTATAAACTCGCAGCGTGGAATGCCCGCTGCCTTGGGCGCTGGTCAAATGTCGCCTTCATTGCTGTCGCAGCTTAATCAAATACCAGCAACCATTAAACTGCATCAGCcacaaccgcagcagcagcagcagcaacaggcccagcagcaacagcaacgcattGTGGCCAGCAAAAGTGCGCCCATccctcagctgcagcagcatcagtccATTATACAACAGCACATAATCTCGAGTCCTgccacatcagcagcagcaacagttgctgagAAGCGACAACTGTTGCTGGGTGGCAGCATCAAGGAGAGCACGTTGATAACACAAACTCCAGCACAGGTACATCAGAGTCAGCTTAATTCGCAGACTATTATAAccacacaacaacagcagcagcagccagcaacgatgcagcagcagcaacatataaGAAGcgtgctggagcagcagcatccctCTATAATACAACAAAAGATTAGTCTACCCACGACGctaACGGATGCGGCCAAGCCTAAGgtaacgacaacaacaacaattgctaagAAAACGATAATACAGTCGCCAGCATTGAAGCCAGTAGgaacagccagcagcaacagcgaagCAGCTAGCAAAGCGCCGACtgcagagccagcagcagcagcaacagttgcaacggcagtaacaacaacaacaacagcagcagcagcagcggcagcagcaggaacagtTGCTGCGAtcagcacaacagcagcaaccacaacagtaGCCCCACAAGCAAGCGTGAGCACCGCTGTGCCGGCCGATGCCAATTGGTTGTTTATATGCGATTGGCGGAATTGTCCACGCCGCAAATTCAAATCTCTCAATGAGCTGCAGCATCATGTGTGCAATGTGCACTGCCCGGATCATTTGGATGCAGGCGCTGAGATCTATTGCCAGTGGGGCAGCGGCGCTAGCTTATGCGATAATATAGCGCGCAAGCGTTATTCGCTGATGACTCATCTGGTGGATCGCCATTTGGCGGTGGATGATTTGCGAGCCAGCATGCAGCGGCGACTTGCCACAGGCTTACACAATGTGGCGCCCACCCAACCAACAGTGACCATAGTGCGCAATGCGCCGTCGGCAAGTGCGACAGCTGCGGCTGGTGGAGGAGCTGGCGCAACGGCAACCGCTGCTGTGGGCAGCTCAGCCTTGCAGGCCATCAAGCGACACTCGGCGGACTTTCTCAACTCGAAGGAGCTGATGGACGAGAACGAGGGGCCCGTTACCAAAAGCATTAGGCTAACAGCAGCTTTGATTTTACGCAATTTGGTCAACAGCTCGACAACAGCCAAGCGTGGACTGAAGCGCTACGAGGCCCATCTGGCGCATGTGGCCTTTAGCAATGTGGAGGCCAGCGGCGTGCTCTCGCACATACTACACGagctgagtgagtga
Protein Sequence
MTSIENNVRNLLQTLPARAEGSSMQLNEITMTPGKLGATPIPLRARNPQQQQQQLQAQQQLYFSTPGKTEKNSDNGAEEFWRDLHQFHERRGTPLTQAAKISGQRVDLYRLYQEVTERGGFNKVNMRDEWDEVFSALESIRQCVNGTAGIKHIYRRYLDKYEKLTFFGEDPDKLEALEAAIECADVGMGRSRSRALGGGSGGVGSSALTSSGLGGIFGHAHSTLTAVPMAYNHRQHVVNLERRRQHKMSTQLHKHSNYEKLLLSLLSPLPNEQDFAINVCMLMANEPRTTLQLMECPKLLDVLLAHLGVYADYSMRQLFQQGAPQGKRHAKLHFWQDLLYEKPQILELYTDEQAWQENGLISKEMDEPEPLPLDELQLDFLNLRRSYGTDERVGQRVLQIVQLLRSLSFQQEHVQLLASNRTLWRYLVMAVNVRWSNIHIQALETAGNMAQQFELLDPATDELSRNLLATLCEGIESNDRAVIISCLEILYKLCAREGNAQHINRCLGLDFYQRVMLLLSLTDVMLLIFTLEAIYALSSLGARPCSMLMQVRGLLDQLVALLTVEAQSYGAAGCILMRVVEVVPGNMLPTLTQGAQLTQMVPAKIAAPPPPSVQTPAPLLQFHVLPAQVESAAVTAPPTVAATAPPLQLSAPVSLPQAQLPPVAVAPAPAPTPASAPAMPILPPAPSAPQSFTHEDETYALAWLGATYERAGIGHENRVEQQELYTIYLSHCQKAGKHSVVNRMQFPRLVRLIFNPSVGPAIVRQLDGTDLPGTHYVGIRMRAQPLPLQQPQQQQQQQQQQQQHQVQVQAKLQTVRKDIPLGTTGEATPSAAVEEGSAAGSAGTAPSSSLIKSLLANKVNERQQKQKAQAQPPALVATTSSSSASSQPIKVTSTTAISAFVNNPLMQHTPVKVGQTTIKPLHPQLSLEKKPLSDSAPPPLAPLSGANVKKDPQGRTLIIQAKRKLTVDEELHNKRMALDKEAETPVTPSKNAANLYADLAASILEDEDLDDVPPLASSSQEQAAPSTPQQQQQQQQMQLMPGKMQSGPRQILLPAPPPTPQLKLATTTATIKTDQGLQTVPVILAPKTEAASQSQAPTQTQYVLATNQQGQTYLVAQQTPTVPVGQPASAPPTLLVTQAPQQQTKTIIILQQQPGGGVGATNVPGTQKVYMTTSSGQPLLVTTTTGGAQPRPGTPAQATQQQQQQQQQQQQQQQIFINSQRGMPAALGAGQMSPSLLSQLNQIPATIKLHQPQPQQQQQQQAQQQQQRIVASKSAPIPQLQQHQSIIQQHIISSPATSAAATVAEKRQLLLGGSIKESTLITQTPAQVHQSQLNSQTIITTQQQQQQPATMQQQQHIRSVLEQQHPSIIQQKISLPTTLTDAAKPKVTTTTTIAKKTIIQSPALKPVGTASSNSEAASKAPTAEPAAAATVATAVTTTTTAAAAAAAAGTVAAISTTAATTTVAPQASVSTAVPADANWLFICDWRNCPRRKFKSLNELQHHVCNVHCPDHLDAGAEIYCQWGSGASLCDNIARKRYSLMTHLVDRHLAVDDLRASMQRRLATGLHNVAPTQPTVTIVRNAPSASATAAAGGGAGATATAAVGSSALQAIKRHSADFLNSKELMDENEGPVTKSIRLTAALILRNLVNSSTTAKRGLKRYEAHLAHVAFSNVEASGVLSHILHELSE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
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