Dbus001838.1
Basic Information
- Insect
- Drosophila busckii
- Gene Symbol
- retn
- Assembly
- GCA_011750605.1
- Location
- NC:8720725-8747532[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.8e-26 5.9e-23 80.6 0.0 2 89 295 380 294 380 0.96 2 2 1.5 3e+03 -1.8 0.1 20 44 533 566 514 577 0.55
Sequence Information
- Coding Sequence
- ATGCAACTGAGAGTGCATCCCACTATGGATTGTAGCGGCCGTTCAACCAACAACATTGAACGTGATTCCGATTTGGGTGACGATCTGtCCCATGGCGATCGCACCGACGATGAGCTGCGCGACTGCGACTCCGTCGACGGCGAgaatcagcatcatcatcagcttaGCGCCAAGGCGGCAATTGCAGCGCGTCTCAGTCACACAGTAGCCGGCGGTGCGGCAATTAATTTCGCCAGCCCCGAACAGCAAACGGATCTGCCACTCAGtcaccatcatcatcagttGCCGCCAAATCATCCGCTGAATGCTTTGGGCAGCTTCATGGGCATCAGCGGTCTACACAGCATTCCAAATCTTCAGCACAGCGATGTGCTGGAGAAGCTCAAGATGCAAGTGCGCGATATGAAAGTTGGTCTCATGGAGCAGGATTatgcagcagcggcgcatGCGGCAGCCTTTGGAGCAAATATGTTGCCAACGACCATAAATTCGGCATTTCCGCTGCCACACAAtacggtggcggcggcggcggcagctgcaagCTTTGGGCATGCCAACAATGTGGCAACAGcgagcaatggcagcagctacaatggagcagcaacaactggagcagcagcagcagcagcagcgccagcaacaggtGCGGGCGTCGCCAGCAATGCAGGCGCAGCTGGAGGAGGAGGCgccacagctgctggcaatggACATGCATTCTCATTTGCATCACCCACAGCGCCCAGCGCCAAAGAAGCTAATTCGGCATCAAATTCATCGACATCCAGCGAAGCGAGCAATTCCAGCCAGCAAAATAATGGTTGGAGCTTTGAAGAGCAGTACAAACAAGTCAGACAGctCTATGAAATTAATGATGATCCCAAGCGCAAGGAGTTTCTGGACGATTTGTTTTCGTTTATGCAAAAGCGCGgcACGCCTATCAATCGCCTGCCCATAATGGCCAAATCGGTGCTGGATCTATACGAGCTATATAATCTGGTTATAGCACGCGGCGGTCTAGTCGATGTCATCAACAAGAAACTCTGGCAGGAGATCATCAAGGGACTGCACTTGCCCTCGAGCATAACCAGCGCTGCCTTCACACTGCGCACACAATACATGAAGTATCTTTACCCATACGAGTGCGAGAAGAAAAATCTGAGCACACCAGCCGAACTGCAGGCGGCCATTGATGGCAATCGACGCGAAGGCAGACGCTCCAGTTATGGCCAATACGAGGCCATGCACAATCAGCTGCCACTGACGCCCATTTCGCGACCACCAGGCATGCCCGCTGGGATGCAACAGATGTCACCGCTGGCGCTGGTCACacacgccgccgccgccaacaatCAACAGGCGcaggcagcggctgctgctgctgcagctcatcgACGTCTGATGGGCGGGCCAGCTTTtggccaaatgccaaatttgGTCACGCAGGAGATTGAGAATCGCATGATGGAGTATCTGCAGCTGATACAGGCCAAAAAGGAGCAACAGAATGCGCCTGGTCTGGGCAATGCGCAtacacatcagcagcagcagcagcagcaacagtcgctgcatcatcatcagcaacagcagcagcagcagcaacacCGTCAACGCTCACAAAGTCCAGAGCTGAGCACACGCGATGCTTTCAGCGCTCAAGTGGCACTTTGGCAGATGTATCACAATAGCAGTCCAACTGGCTCAGCGCACACCTCACCGCAGCAAAGgGAAGCTTTGAACCTCTCTGACTCACCGCCCACACTAAATCTGAATCACATAAAGCGCGAGCGTGAGCGCGAGCCCACACCTGAGCCCGCAGACTCCGAGGAGATGACGCATCAGCCGCCGCCAGCGAAGCGTGTGGGCAGCGGTCTAATGCCGCCCGGTTTTCCTGCCAATTTCTATTTGAATCCGCACAACATGGCCGCAGTGGCTGCCGCCGCGGGCTTCCATCATcaggccagcaacaacaacaacagcagccatcatcatcagcagcagcagcaacagcagcaggatgCAGCCTCAGAAGGCGAGCCAGAGGATGACTACGGCCATGCTGAGCACAATACCACGGGCAACTCGTCGTCCATGCATGACGACAGCGAGCCACAGCAGCTAAAcggccaccaccaccacaatcatcatcatcagaaTCATCTGGACAAGTCAGATGACTCGGCCATCGAGAACTCGCCCAGCACTTCCACAACAGCCTCAGCTGGTGGCGGCGGTCATCGTCACAGCTCGCCCGTGTCCACCAAGAAGAAGAGCTGCAGCTCCGGCGGCAAAGCGCAGTCCAGTGGCAAGGACGCGCAGTCGGAGGCAGGCGATGGCCCCCTGGAGACGCTCAGCCTGCTGTCGGGCATGCAGTTTCATGTGGCACGCAATGGCACGGGCGCTAATGGGGAACAGCAGCTGATTGTCAATCTGGAATTAAATGGCATTAAGTACTCGGGTGTGCTGGTTGCCAATGCGGTCAGAGCAGCGTCCACTGAGAAAACAGAGCCCAAAGCGGAGGTTTCAAATGAGCAGGAGCCCACGCATGGGGTGGCCAACGAGTTGAATCATGAGGCCAGCGAGGAGCTGagccaaactgcagcagcagcagcagcagcagcagcagccgttgtGGAGGACGAGGATGAGGAGCAGACAGAGCAGCAAATGTCAACAGATGCCATTGTTAATGgaggcgtgggcgtgggcgtgggtgtgggcgtggaTATGGCCACAGCGCTGCTAAAGGATGCCGTTGTCAGTTCATAA
- Protein Sequence
- MQLRVHPTMDCSGRSTNNIERDSDLGDDLSHGDRTDDELRDCDSVDGENQHHHQLSAKAAIAARLSHTVAGGAAINFASPEQQTDLPLSHHHHQLPPNHPLNALGSFMGISGLHSIPNLQHSDVLEKLKMQVRDMKVGLMEQDYAAAAHAAAFGANMLPTTINSAFPLPHNTVAAAAAAASFGHANNVATASNGSSYNGAATTGAAAAAAAPATGAGVASNAGAAGGGGATAAGNGHAFSFASPTAPSAKEANSASNSSTSSEASNSSQQNNGWSFEEQYKQVRQLYEINDDPKRKEFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSTPAELQAAIDGNRREGRRSSYGQYEAMHNQLPLTPISRPPGMPAGMQQMSPLALVTHAAAANNQQAQAAAAAAAAHRRLMGGPAFGQMPNLVTQEIENRMMEYLQLIQAKKEQQNAPGLGNAHTHQQQQQQQQSLHHHQQQQQQQQHRQRSQSPELSTRDAFSAQVALWQMYHNSSPTGSAHTSPQQREALNLSDSPPTLNLNHIKREREREPTPEPADSEEMTHQPPPAKRVGSGLMPPGFPANFYLNPHNMAAVAAAAGFHHQASNNNNSSHHHQQQQQQQQDAASEGEPEDDYGHAEHNTTGNSSSMHDDSEPQQLNGHHHHNHHHQNHLDKSDDSAIENSPSTSTTASAGGGGHRHSSPVSTKKKSCSSGGKAQSSGKDAQSEAGDGPLETLSLLSGMQFHVARNGTGANGEQQLIVNLELNGIKYSGVLVANAVRAASTEKTEPKAEVSNEQEPTHGVANELNHEASEELSQTAAAAAAAAAAVVEDEDEEQTEQQMSTDAIVNGGVGVGVGVGVDMATALLKDAVVSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -