Basic Information

Gene Symbol
Ubp1
Assembly
GCA_011750605.1
Location
NC:11549607-11559788[-]

Transcription Factor Domain

TF Family
CP2
Domain
CP2 domain
PFAM
PF04516
TF Group
Beta-Scaffold Factors
Description
This family represents a conserved region in the CP2 transcription factor family.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 0.54 3.3e+03 -3.4 1.1 16 54 94 131 79 135 0.51
2 3 3.8e-52 2.4e-48 163.8 0.4 23 187 433 594 413 607 0.90
3 3 2.7e-13 1.7e-09 36.8 1.0 188 222 666 700 659 701 0.91

Sequence Information

Coding Sequence
ATGGCGCTTTCCTTTTTATCGCAAAACTCCGGCCTGTTGGATTTACAAAGCATATTTGATCCACAATATTCATTGCAACAAcatcaccaacaacaacaacaatttcatatATCAacgcatcaacaacaacaacatccactgcaacagcagcagcaacatcaacaacaacaacttcaacaacaacaattatcaACAACATCCCGTACATCAACgaaatttgatttaagcaTATTCAACGATTTCGACCAAATGGaattcaataacaatttgaaTCGAAACCACAATCAATATCAGAAtagtagtaataataatagcagtaataataataaccacaataacagcaacaatattcaTACGCATCAAAACAACGGTGTAGCTGAAAATCTTAATCAGATCCAAAATCGTCATTTTATTAGCGGctatcatcatcagcatattGGATCGGATTATGAGCAAGTGATTAATTTTGTGGACTCACCACCTAATTCTGAGGAATCTTGGACAGACGCACAGTCCAAGGATTCACCAGGACCCCAAATCATAGACGTTAGAACGATTTATTCGAACTCAAGCAGTGGTTCACGCAAAAGACGAATGGATTGGGACTCATTGGACATTGGTCAAAGTGAAAATTCACCGACAACACAAACGGGAGATTTACCCAATAAGGCAGCACAACATCAGGAGAAAGATAAACACAAGCGTGAAAAGCACTCAGgtcgcagcagctggagcgaCGATATTGGTTTTGATCTTAACGCCGAGTTCAACAGCAACTCATATTTAAACAATGAAAACTTTTTATCGTTCTCCCCGAGCCTGACGGCACTCAAACAGGAGCCGCAAACGGAGCAGCTCAAGCCGAATACAAAGCTACCCTTGGATAGTGCCAACGCCGGCGTTGTGGTCAACATTGGCAAGCTAGATAAATCGCCATTGGGCGATGCCAATCATTCGCCACAGCATACAGCGCAGAGCAAGgaaactgctgcagcagttggagcaggagcaggagctggtGGAGGAGcggctgctggtgttgctggcAAGCATGAGTTGAACGGTGGCATCATCTGTGGCTGTGGCTCGCCGCAAGGCTCGCCCGCTGCAACGGAATTTGAACTAAACGGCAATGCCAATGGAAATGCACAAGCTGCAGACAAGtctagagcagcagcagcagcagcagcagctggcaatgaGGCCTATGCACAAGCGCcagcacGCGCTggactgcagcaacagctgagcGTCGTCGAGGCGGCTAAAATAGAGCCCAGCTCAGTCGCAGGAGCAGCTCATGGCGATGAACACAAATTTCAATACATTTTGGCAGCGGCCACCTCGATTGCAACCAAGAACAATGAGGAGACTTTGACTTATCTGAATCAGGGTCAAAGCTATGAGATCAAATTGAAGAAAATTGGTGATTTATCTTTCTATCGCGATAAGATTTTGAAGAGTGTTATCAAAATCTGTTTCCACGAGCGTCGTCTGCAGTTTATGGAGCGCgagcaaatgcaacaatggCAAGCCTCGCGTCCTGGCGATCGCATCATTGAGGTGGATGTGCCTTTGTCCTATGGCCTGTGCCATGTCTCGCAGCCATTGAGTTCGAGTTCACTGAATACGGTTGAAATATTTTGGGATCCACTGAAGGAGGTCGGTGTCTACATCAAGGTCAATTGCATTTCAACTGAGTTTACACCAAAGAAGCACGGTGGAGAAAAGGGTGTACCATTTCGATTACAAATTGAAACCTACAtagaaacaacaaacagcagcagcggcaacaacaacagcagcagcagcaacaataacaataacaacagcagcggcagcagcagcagcaacagcagcagtagcggcagcaacaacaacagcccaGCAGCTTGCACTTCACCCGGCAACACGCCCGAGCAGCGTGCGTCCAATGGAAATGTCAGTGGCGGCTCCGGCTCCGGCTCCATTGCCGCTCTGGCCGCACTCAATGGCAAACAAGCGGTGCATGCAGCTGCCTGCCAGATTAAAGTTTTCAAACTAAAAGGCGCTGATCGCAAGCATAAGCAGGATCGCGAGAAGATACAGAAGCGTCCACAATCTGAGCAGGACAAGTTTCAGCCCAGCTACGAATGCACCATTATGAACGATATATCATTGGATTTGATACAACCAGCCACCACCACTGGCTGCTACAGTCCCGAGTAcatgAAATTATGGCCAAATTCGCCGGTGCATATTCCAAAATATGACGGTATGCTACCATTTGCCAGCAGCGCATCACCAGCGACCAGCAGCAGTCCGATTGCCATCAATTCAGTGACATCAACCAATTCGCCAACATTGAAACTAATGGATGCCACCAACATGGTCTCGCCGCAGCATGTGCCAGCGGATATGGatgaatatCATCAGAACATAATGCCCGAATCAACGCCCGCACAAGTGACACAATGGCTAACCCAACATCGCTTGACGGCCTATCTAACAACATTTGCTCACTTCTCTGGAGCTGATATTATGCGCATGTCCAAGGAGGATCTTATACAAATCTGCGGTCTGGCCGATGGCATACGCATGTTTAATATATTGCGCGCCAAATCAATTGCGCCGCGCTTGACGCTCTACGCCAGCATGGACGGCTGCAGCTACAATGCCATCTACTTGCTCGCCAACACGGCCaaggagctgcagcagaagCTGTTCAAGCTGCCTGGCTTCTATGAGTTCATGGCCAAGGGCGGCTCGTCGGGTGGTTTGGAGAATGGCggcgttgccgctgccgcagccgccgcagctgctgctgcagcgctctACAACAGCTGGGGCATGCAATCCAAGTACTCGGGCAGTGGCTCCAACATTTTCAACGAGGTCAACAAGAGTGCCGTTTATATTTCGGGTCCCTCGGGCGTTCATGTTTGCGTCAGCGATGAGGTGCTCAACAATGAAATCAAGGATGGCAGCCTCTATGCGCTGGATGTGCAAGCCGGCAAAGTTATTTTGAAGCTAATCAATAAGCCAGACAACAATTGA
Protein Sequence
MALSFLSQNSGLLDLQSIFDPQYSLQQHHQQQQQFHISTHQQQQHPLQQQQQHQQQQLQQQQLSTTSRTSTKFDLSIFNDFDQMEFNNNLNRNHNQYQNSSNNNSSNNNNHNNSNNIHTHQNNGVAENLNQIQNRHFISGYHHQHIGSDYEQVINFVDSPPNSEESWTDAQSKDSPGPQIIDVRTIYSNSSSGSRKRRMDWDSLDIGQSENSPTTQTGDLPNKAAQHQEKDKHKREKHSGRSSWSDDIGFDLNAEFNSNSYLNNENFLSFSPSLTALKQEPQTEQLKPNTKLPLDSANAGVVVNIGKLDKSPLGDANHSPQHTAQSKETAAAVGAGAGAGGGAAAGVAGKHELNGGIICGCGSPQGSPAATEFELNGNANGNAQAADKSRAAAAAAAAGNEAYAQAPARAGLQQQLSVVEAAKIEPSSVAGAAHGDEHKFQYILAAATSIATKNNEETLTYLNQGQSYEIKLKKIGDLSFYRDKILKSVIKICFHERRLQFMEREQMQQWQASRPGDRIIEVDVPLSYGLCHVSQPLSSSSLNTVEIFWDPLKEVGVYIKVNCISTEFTPKKHGGEKGVPFRLQIETYIETTNSSSGNNNSSSSNNNNNNSSGSSSSNSSSSGSNNNSPAACTSPGNTPEQRASNGNVSGGSGSGSIAALAALNGKQAVHAAACQIKVFKLKGADRKHKQDREKIQKRPQSEQDKFQPSYECTIMNDISLDLIQPATTTGCYSPEYMKLWPNSPVHIPKYDGMLPFASSASPATSSSPIAINSVTSTNSPTLKLMDATNMVSPQHVPADMDEYHQNIMPESTPAQVTQWLTQHRLTAYLTTFAHFSGADIMRMSKEDLIQICGLADGIRMFNILRAKSIAPRLTLYASMDGCSYNAIYLLANTAKELQQKLFKLPGFYEFMAKGGSSGGLENGGVAAAAAAAAAAAALYNSWGMQSKYSGSGSNIFNEVNKSAVYISGPSGVHVCVSDEVLNNEIKDGSLYALDVQAGKVILKLINKPDNN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00803364;
90% Identity
-
80% Identity
-