Basic Information

Insect: Drosophila burlai
Gene Symbol: -
Assembly: GCA_008042655.1
Location: VNJT01017522.1:25631-28024[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 0.21 16 6.3 2.9 1 23 410 433 410 433 0.89

2 7 0.0075 0.58 10.8 2.8 3 22 561 580 559 583 0.90

3 7 0.11 8.8 7.1 2.2 2 21 594 613 594 614 0.95

4 7 0.36 27 5.5 1.1 1 20 631 651 631 653 0.94

5 7 0.00036 0.028 15.0 0.5 1 23 680 702 680 702 0.97

6 7 5.8e-06 0.00044 20.6 1.3 1 23 708 731 708 731 0.96

7 7 3.6 2.8e+02 2.4 0.5 1 11 737 747 737 754 0.81

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	0.21	16	6.3	2.9	1	23	410	433	410	433	0.89
2	7	0.0075	0.58	10.8	2.8	3	22	561	580	559	583	0.90
3	7	0.11	8.8	7.1	2.2	2	21	594	613	594	614	0.95
4	7	0.36	27	5.5	1.1	1	20	631	651	631	653	0.94
5	7	0.00036	0.028	15.0	0.5	1	23	680	702	680	702	0.97
6	7	5.8e-06	0.00044	20.6	1.3	1	23	708	731	708	731	0.96
7	7	3.6	2.8e+02	2.4	0.5	1	11	737	747	737	754	0.81

Sequence Information

Coding Sequence: ATGCCCGCCCACTGTGCCGTTGTTAATTGCAGCGATAAATATGTACACGCCGGCAGCATTTCTTTCCACAGATTCCCGTTTAAGAGAAAAGATTTGCTGCAAAAGTGGCAGGACTTCACGCAGAGAACGGGCCAGTGGATGCCATCCAAGTGGAGTGCCGTGTGCAGCCGTCACTTTGTAGACGATGACTTCAATTGCTGCAACAACCGGAAGACGCTCAAAAAGAACGCTGTGCCGACGGTGAGATTGCCGGAGGAGGATGCCCCGAGTGTACCAGTGAAGCAACACGTGGCTCCCAGCAGGCCAGCAAACAAACCCACCCTCGCCAGTGCCGCTGAGGCGCCGACAACAGGCGTTAAGGCCACCTGCCGCTTTTGCGGCACCTCGTCGCTAAATTGCTCTTCCTTTGACAACAACTTTGAGTTGTTTGGCATGATTCAGAGATGTTTTCCAACGCTCCAGATCCTGCAGGATGATACGCTGCCCAAGGATATCTGCAAGGAGTGCTGCTTGAAGCTGGAGCAATTCTCCCAGTTCATCGATGTGGTCATGCAGGCGCAAAGCGAGCTGCAGCGCAATTATCGCCGCCAGTTGAAGATTAAACAGGAGCCCTGTCCGGTGCGTGTGAAGCAGGAGGCCTGCGAGAGTCTGGACAATCTCTTTCCCGACGAACTGGACATGGGCTTGGAGCAGGACGAGGGCTGTGAGCACGAGGAGACGGAGCAAAAATTCCAATTCTGTGATTTTCCCATGTTGAATGCCCAGGACATAATCAACAATTGTGATATTATGGAGATTATCAATCTGGACGATCCGTTCATTAATATACCGGATGACGCGGATGTCGGAGGGCAGGCGGAGAGATCGCAGCCCTTGAGGACGGCCAATGATATGCTGCAATCGGAGCTGCTCACCGAGGAGCATAACTATGCCAAAGAGGAATGGCCGCCATTGCCCAATCTTCAGTACAAAACGGAGAAGGTTGAGGGTGCAGAGGTGGCACCAGAGGTGGCCCCTGCTCCTCCCAGTGCTCCATCAACTGTGCCTGATCACGAAACACGCTCGTGCAAACCCATTGTCACAAATGTAAGTCAGATACCCAATCCAATGCTCTGCGAactgctgccgccgcagccgccgccggtgcctcctcctcccaccTCCTCAAAACCCAACATTGTGGTGCTCAACGACAGCGTTGTCCAATCCTCCGCTGCCTTTCGCCTCCACAACTGCAGCCTGTGCACGGCCAAATTCATAACGATGGATAGCCTGAATCAGCATTTTGCTCACAGTCACAGCAACACACCAATGGTGAGTGTTCCCGTCAATCTGCCGCTGAATCCTGCCCTGAAATTAGAAGGCAACAGCCAGGGTTTTCTGGCCACAGAGCCTTTGGATTACTGGCAACCCGAGTGGCAGAATAGTCCTCCCgtccagcaccagcagcagcagccgaagaAAAAGATCGACATACTGGACATGCAGAGCAGCTTCCTTCATCACAAGGATCTCATACCAGCCACTCAACTGGCAGCTAATCCTCTTCCCCTGCCCGATCCCCAAATGGCTGTGGTCTCCGCAAACTACGCCAAACTGGCCGTTCGttatcataaattaaaactgaaatgtAAAAAGTTAAACCTTTCCAAGAGAGGGAATCGTTTTGGATCGCAAATCTGTCGGGTCTGCAAGCGAGGTTTCTCTACCTTCAAACAGCTTTTCCACCATCGTCGTGCCAAAGGACACTTTGTCAAGTTAATTCCTAGCTTCTCCGGCCGTTGTTGCGGCTGCCTGAAGCTATTCCGCTCGCGTTTGGCCCTCCGACAGCACATGAAATACATCTGCCAGAGTTTATCTTTGAAGAACCACCAGCGTCGCCTGCAGAGCTTCAAGTGCCGTCACTGTCAGGCCATCGCCTTTGCCCACTGGCGCCTGTATCGTCGCCACGAACTGAATTGTCCGAGGAGAAAGCCGGAGAAAACCAAGCGACACATGTCGTCGGTGTCCAGGGCGGCGTCCAAGAAGAAACAGAGTTTTTCGTGTTCCATATGCAAGAAGCCATTCGGTTCCCTCAACGGTCTCAAGCAGCACAACATCACCCACTCGACGGAGCGGCAGCACAAGTGCGGCATCTGCGGCCGAGTCTTCAAGCGGCGCAATGGCCTGTCCCAGCACATCAAGGGCTACCACCTGCAGCTCAAGCCGCACCAATGTCCGGTCTGTGAGCATCGCTATGCCCTGAAATGTGACATGCTGAGGTGCAGGCATTCACTGCGCAAGGATCCTCTGCTGGCGGGGAGTGAAAGGAAGCAAGTGGGGCATAGTTCTTGA
Protein Sequence: MPAHCAVVNCSDKYVHAGSISFHRFPFKRKDLLQKWQDFTQRTGQWMPSKWSAVCSRHFVDDDFNCCNNRKTLKKNAVPTVRLPEEDAPSVPVKQHVAPSRPANKPTLASAAEAPTTGVKATCRFCGTSSLNCSSFDNNFELFGMIQRCFPTLQILQDDTLPKDICKECCLKLEQFSQFIDVVMQAQSELQRNYRRQLKIKQEPCPVRVKQEACESLDNLFPDELDMGLEQDEGCEHEETEQKFQFCDFPMLNAQDIINNCDIMEIINLDDPFINIPDDADVGGQAERSQPLRTANDMLQSELLTEEHNYAKEEWPPLPNLQYKTEKVEGAEVAPEVAPAPPSAPSTVPDHETRSCKPIVTNVSQIPNPMLCELLPPQPPPVPPPPTSSKPNIVVLNDSVVQSSAAFRLHNCSLCTAKFITMDSLNQHFAHSHSNTPMVSVPVNLPLNPALKLEGNSQGFLATEPLDYWQPEWQNSPPVQHQQQQPKKKIDILDMQSSFLHHKDLIPATQLAANPLPLPDPQMAVVSANYAKLAVRYHKLKLKCKKLNLSKRGNRFGSQICRVCKRGFSTFKQLFHHRRAKGHFVKLIPSFSGRCCGCLKLFRSRLALRQHMKYICQSLSLKNHQRRLQSFKCRHCQAIAFAHWRLYRRHELNCPRRKPEKTKRHMSSVSRAASKKKQSFSCSICKKPFGSLNGLKQHNITHSTERQHKCGICGRVFKRRNGLSQHIKGYHLQLKPHQCPVCEHRYALKCDMLRCRHSLRKDPLLAGSERKQVGHSS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00526220;
90% Identity: iTF_00489702;
80% Identity: -