Dbur000852.1
Basic Information
- Insect
- Drosophila burlai
- Gene Symbol
- -
- Assembly
- GCA_008042655.1
- Location
- VNJT01007360.1:7937-14516[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.0018 0.14 12.7 0.9 1 23 1182 1205 1182 1205 0.97 2 13 6.8 5.2e+02 1.5 0.2 1 23 1368 1390 1368 1390 0.91 3 13 0.00015 0.012 16.1 2.7 2 23 1393 1414 1393 1414 0.97 4 13 5.8e-05 0.0045 17.4 0.2 3 23 1422 1442 1420 1442 0.98 5 13 4.9e-07 3.7e-05 24.0 4.1 2 23 1449 1470 1448 1470 0.97 6 13 4.3 3.3e+02 2.1 0.4 5 23 1483 1501 1480 1501 0.95 7 13 1.1 88 3.9 5.4 3 23 1508 1529 1506 1529 0.93 8 13 0.12 9.3 7.0 0.2 2 23 1540 1560 1539 1560 0.96 9 13 4.7e-05 0.0036 17.8 0.4 1 19 1566 1584 1566 1588 0.95 10 13 2.9e-05 0.0023 18.4 0.4 1 23 1596 1618 1596 1618 0.98 11 13 8.7e-05 0.0067 16.9 7.6 1 23 1624 1646 1624 1647 0.96 12 13 0.00019 0.014 15.9 6.5 1 23 1652 1674 1652 1674 0.98 13 13 0.0023 0.17 12.5 6.1 1 23 1680 1702 1680 1703 0.96
Sequence Information
- Coding Sequence
- ATGGTCGACAACAGCGTTCAGTGCCCCGTGTGCACCCTGTACCTGCATGCGGGAATGAATCTCTCCGATCACCTGGAGACTCATCCCAAGGAGCAGGTGATCAAGGCGCTGGTCCAGATGACGATTGTCGGGAGCggtggcagcaacagcatgGGCAGTGCCCTGGCGGCCGCTATGAtgtcaggaggaggaggctctggagctggaggaggcggtggGTCTGATGGCGGAGAAGCCGGCATGGCAGATGATAAGACCGCATTCACATTGTCATCTCCTTGCGGCGATGTCAAACCAGTTGTGGCCAGCAGCCCGCCAGCGGTGTCCAAAACCATATCAGCAGCAATGCCCGCACTCTttacgcagcagcagcaccagcatcagcCGCCGACAGCTTCACCGCAgtcgctgcagcagccgcaccaGAAACCACCTCCCGCCTACGGAGCCGCCATCAGTCAAATACGATCTCAGCACAACCAAATcaagcagcagccacatcagcagcagttgcagtcACAGCAGCCACCCCACATGGCCGGGCAGCACAACCTAAACCTGGCACCACCgacagcagcaccaacaacagcagcagcagcgggagcagctcCTTCGATATCAACTGCAGCTGACAAGCAAACCAGCAAGACGCATGGGGAGGTATTCCTGAATCCCCCACCGCCACAGCCACAGGCACAGGCAACGATGgggcagcatcatcatcagcagccgAATCATCAGAGTCACCCACAGTCGCCGCATGTCCATCCGCATTCGCAGCAGCATTCGACCCACCACCAGCAGTTGCCCTCCTCAagattgcagcagcagcagcagtcactGGGCTTGCAGACCTACGGTCCGGGTATGAGCAGCAGCTGTAGTTCCAGCTCTGCCTCCAACTCTGGCGGCAATCGGAGCTCTCGGCAAACCAACTCACCCTTTGGGGCACTGCTCAACGCAGCCgcggctgtggctgtggcctGCAACGCGCCAGCCTCGGGCAACGCctgctcgtcgtcgtcggttcTGCGCTTTGCGGAATCTCCGGTAGCCCACTATCTGGAGCGGGAAAACGGCGACTTCATTGTCCAGGAGACGCCCAAGCACATTGTGGAGTGTGTGGAGAAGGAGGACGGTGAGTTCTCCGTGATCGAGCGCATTTACCAATCCCCGCCGAGTGTCCTGCACATACACGATGACGATGAGGACGAAGAGgatgaggaagaggaggaggaggacgacaaCGACCACGACCACGAAGCACAGccagaggaggaggtggacggGGACGATGAGCGGGAGGAGAATagccgcagtcgcagtcgcaagACAACGAAGAAATCGCGGAAGGCCAAGCCCAAGCGAAGCTCCAAGCGCGTCGCGAACGAGGATGAGGAATTCATGAGCATAAGCAGTGGCTGCGAGAGTGAGCCGGAAACGGAGCGCAAGCCAGAGTCGTCGACGTCAACCTCCGTTGCACCTCCGCTTTGCACAGGTCCCTCCACCagttctgccgctgctgcagcagccgccgccggagGAACGTCCAGCAATCTGGTGGATACTCATTCCAATTCGACCTCCAATTCCGCCTCGAACTCGACATCCACCTCCACGTCCACCACGACCAAATCCAAAAAGAATCGGATCACGGTGCTCAGCGATGTGCCGCTCAATATGAATGAGTACCTCGATCTGATGGGCAACATTGTGGCCTCCAGTCGCATTGGGGCCGGACGCCCCTTTGCCGCTGTGGTTCCCATTCCCCTCGTCAaggtggagaaggaggagccCCTGGACGAGTACGACGACAACAGCGAGGCAGCGCAGCAGGTGGAGAAGAAGCCCAGCTTGGAGCACCACGGCACCACAAGTGTCATTCGCATGGCCAGCACAGTGACAGCAGccacgacaacgacgacgccGGTGACTGTGACGGAGGAGGCATCCGCCGAGGATCTCAACGAGCCGCCGCTCATGAAGGTCGAGGTGGAGCCCAACACGATGTTGCTACCGCAGCGCTTCTCCACTCCCGCCCAGAGTCGCGGGCCCAAGAAATTAGTCATCAAACCAAAGGCAacagcatccgcatccgcgacgacaacaaaaaagacTGACACCTCTCcatcttcctcctcctcctccgccagcaacaacaacacatcCATATCAAAAGATTTGGGGCAGGTTCAGGTGAAAAGCGAGACTGTGGAGGCACCAGCGGCTCcagcaaacagcagcagcagcagcattctGGAGAAGCACCTAACCACCAACCGCAACCATTCGGCGgtcaatgatgatgatgcccgGGTGCTGCTGGAGTTTGCCAACTCCAAGCAGCCGCCACCGCTGGCAGCGTCCAGCACCACGTTCGTGGTGAATGCCAGCACGGGATTCCCATCGGCAGGCAGCGTtttcgccagcagcagcagcggcagctctAAGCCTGGCGAGGAATACATTCTGCCGGACAACACCAACCTGGAGGTGGATGAGATTGTGATATCCTCGTCGTCTTCCTACGCTTCCTCAGCGGCCCAGGTGCAGGCGGCGCTGCAGCCGCCGGACTTTAACTTCCTTTACCAGCAGACCACCAACACGGCCACCGCGGCTACCTATCCCTTCAATGCCTTCTCcaggcagcaccagcaccagctccagcagcagcagcagcaacacggTGTAAGCGATGCCACCAATGCGGCCACTTTGGCCTCCTCTTCCAGCAATTCCCTGGACCACGACTCGATGAACGCCTCCTTCCGTGTGGCCAAGACACAGTCGCTGCAGTGGTACCAGCAGGAACAGGAGAACGATCCGCAGATCCACACAGCAGAAGGGGCAGGGGCGTCGCTTCAGGGGGTGTCCTCCAACCAAAGCCACACGGACCATCACCAGCCCACCAACTTCAATGCCGCCCTGGCGGCCGTCGATTGCTGCAGCGTTGCGGGAACGCTGGACGAGGAAGCCAAGTATCTGGACTTGGACACGTGCAAGCGGGAGCagttgagcagcagcagcaacctgcCCTCGGTCTCCGCCTCCACGTCCACCACCTCGTCCTCGTTCGCCGGTGCTGGCACGGAGAGCAGTCTGGTCGGTGGCCTCAACATCCGCACGGACGAGAAGATGCCCGCCAAGGGCGAGATCTCCGAGCAGGAGAGCAACTGTGACATCGAGAACTCGTGGAGTGAGTCGGTCTATGGGGACATTTCGCAGCGGTACTTCAGGAACCAGTTCTCTGGAGGCTACAACCCTGACTGGCGACAGGACTACTACCCGGCTCAGGATCTCAGCGGCGCCCAGCAGAGGGAGCAAAAGCGTTTCGACTTTAATGCGATTGATGATGAGGCCTCATCCAGCTCTAGGAAGAGCCAGCTAACGGACATCGTCCCAAATGTGGCCACCTCCTCCACTTCAACGTCATCGGCTTTGCTGGCGGGTCCACCAATAGCTTCGACGTCCAGGGCTGCCGCTGAGGCGGcagcggaggcggcggctgctcTCGCCCAGCGAAAGCCGCATCGCCGCAAGCTCTACAAGTGCCCCCATTGCGAAACCATCTTCGAGAAGCTCAAGGAGCGGAATGCGCACATGATTAGCGACCACAACTATGTGCGTCAGAATCGAAGACTCATCTgtacgcagcagcagcagcagcaggtcgGTGAACCACCGATGCTGCCCCAGCAGCATGCCGcccagttgctgctgcaggcgAACGAGGCTGCTGTGCAGGAGGACTCGAAGGATGGCATTGTGAAGATCAAGCAGGAGCAGTGTTCGGATAAGCCGGAAGTCGAGCCACTGCACCACGCcaattctgctgctgctgctgctgagctgCTGTCGGATGTCAAGGACTCGGAGCTGCTGGGCATCGGCGGCGAGGGCGATGCGGACTTGGACGGCGACATTAAGCCACCTAGCCAGCTATTTGAGAAGTCGTCcccactgccgccgctggccaTGACGACGCCGGCAGCAAAGCTGGCGGCGCTTTATCGCATGCTCATCGCCTACAATGAATCAAAGCTGGGCCAGGAGCGCAACAACCTCAGCGAACTGGAGCAGAAGGCCATGGAGAAGTCCATTTTTTTGTGCTACGTCTGCCGCACCGACTTCCCCTCCGTCAAGCTTTACGATGCCCATCTCACCGAGCACCCGGCCGAGTGTTTCACCTGCGGCAAGAAGTTCTACCGCTGGAAGAACTTCTCGCTGCACCTGAAGCGGCATCTGGGCTGGAAGGAGTTCGGCTGTTACGTGTGCGACAAGAAGTTCGTGGTGCGGAGCGCCCTCGTCGAGCACATGCGGATGCACACGGGCCAGACGCCGCTCAAGTGCAAGATATGCGGGAAAAAGTTCAAGCGCTACTCGAATCTGACGCAGCACCGCAAGCGCCACACCAAGGTGATGGTGCGGAAGAAGGAGTACGTGTGCCACTGTGGCGAGGTACTGCCCTCAAAGGCGCGCTTCCTCTGGCACAAGGAGACGCACGACTTGAAGCCGAAATGCTGCCCCTATTGCTGTGACAGATTCGTGCACGCCAACTCGCTGCGCCGCCACATACGTCTGGCGCACTCGGACAAGTTCGACTACGCCGAGCCGATGGAGTGTCCGATGTGCAAGCAGATCTTCGCCAAGACATCGATCAAGGCCCACATGGCGACGCACTCGACGGAGCCGCAGTACGACTGCGCCATCTGCAACAAGAGCTTCTCCACCAAATGGAATCTCAAGATCCACTCGTGGGTCCACGCCAATCGGACGGCCAAGCCCTTCAAGTGCGAGTACTGCCCGAAGGCGTTTGTGCGCGAGCTGGACTTCAAGAACCACATCAACGCGCACAAGCAGATCAAGCCGTACACGTGCGAGTACTGCGGCTGCAAGTTCATCCGCAAGTACAACTACATGCGGCATCGTCGCGAGCACCACGGCACCAAGAAGTTCACCTGCGACCAGTGCGACAAGTCCTTCCATCGCCACTACTATCTGATCGAGCACCGGCGCATGCATACCGGCGAGCGGCCGTTCACCTGCACCATTTGCGGCAAGAGCTCCACCACCAAGACCAACCACAACAAGCATCTGAAGATCCACCACTCGCGCGACCCCTTCACAGTGGAGGTCTAA
- Protein Sequence
- MVDNSVQCPVCTLYLHAGMNLSDHLETHPKEQVIKALVQMTIVGSGGSNSMGSALAAAMMSGGGGSGAGGGGGSDGGEAGMADDKTAFTLSSPCGDVKPVVASSPPAVSKTISAAMPALFTQQQHQHQPPTASPQSLQQPHQKPPPAYGAAISQIRSQHNQIKQQPHQQQLQSQQPPHMAGQHNLNLAPPTAAPTTAAAAGAAPSISTAADKQTSKTHGEVFLNPPPPQPQAQATMGQHHHQQPNHQSHPQSPHVHPHSQQHSTHHQQLPSSRLQQQQQSLGLQTYGPGMSSSCSSSSASNSGGNRSSRQTNSPFGALLNAAAAVAVACNAPASGNACSSSSVLRFAESPVAHYLERENGDFIVQETPKHIVECVEKEDGEFSVIERIYQSPPSVLHIHDDDEDEEDEEEEEEDDNDHDHEAQPEEEVDGDDEREENSRSRSRKTTKKSRKAKPKRSSKRVANEDEEFMSISSGCESEPETERKPESSTSTSVAPPLCTGPSTSSAAAAAAAAGGTSSNLVDTHSNSTSNSASNSTSTSTSTTTKSKKNRITVLSDVPLNMNEYLDLMGNIVASSRIGAGRPFAAVVPIPLVKVEKEEPLDEYDDNSEAAQQVEKKPSLEHHGTTSVIRMASTVTAATTTTTPVTVTEEASAEDLNEPPLMKVEVEPNTMLLPQRFSTPAQSRGPKKLVIKPKATASASATTTKKTDTSPSSSSSSASNNNTSISKDLGQVQVKSETVEAPAAPANSSSSSILEKHLTTNRNHSAVNDDDARVLLEFANSKQPPPLAASSTTFVVNASTGFPSAGSVFASSSSGSSKPGEEYILPDNTNLEVDEIVISSSSSYASSAAQVQAALQPPDFNFLYQQTTNTATAATYPFNAFSRQHQHQLQQQQQQHGVSDATNAATLASSSSNSLDHDSMNASFRVAKTQSLQWYQQEQENDPQIHTAEGAGASLQGVSSNQSHTDHHQPTNFNAALAAVDCCSVAGTLDEEAKYLDLDTCKREQLSSSSNLPSVSASTSTTSSSFAGAGTESSLVGGLNIRTDEKMPAKGEISEQESNCDIENSWSESVYGDISQRYFRNQFSGGYNPDWRQDYYPAQDLSGAQQREQKRFDFNAIDDEASSSSRKSQLTDIVPNVATSSTSTSSALLAGPPIASTSRAAAEAAAEAAAALAQRKPHRRKLYKCPHCETIFEKLKERNAHMISDHNYVRQNRRLICTQQQQQQVGEPPMLPQQHAAQLLLQANEAAVQEDSKDGIVKIKQEQCSDKPEVEPLHHANSAAAAAELLSDVKDSELLGIGGEGDADLDGDIKPPSQLFEKSSPLPPLAMTTPAAKLAALYRMLIAYNESKLGQERNNLSELEQKAMEKSIFLCYVCRTDFPSVKLYDAHLTEHPAECFTCGKKFYRWKNFSLHLKRHLGWKEFGCYVCDKKFVVRSALVEHMRMHTGQTPLKCKICGKKFKRYSNLTQHRKRHTKVMVRKKEYVCHCGEVLPSKARFLWHKETHDLKPKCCPYCCDRFVHANSLRRHIRLAHSDKFDYAEPMECPMCKQIFAKTSIKAHMATHSTEPQYDCAICNKSFSTKWNLKIHSWVHANRTAKPFKCEYCPKAFVRELDFKNHINAHKQIKPYTCEYCGCKFIRKYNYMRHRREHHGTKKFTCDQCDKSFHRHYYLIEHRRMHTGERPFTCTICGKSSTTKTNHNKHLKIHHSRDPFTVEV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00617887;
- 90% Identity
- -
- 80% Identity
- -