Basic Information

Gene Symbol
Arid4b
Assembly
GCA_008042655.1
Location
VNJT01019044.1:97970-100084[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 7.3e-29 2e-25 89.1 0.1 1 88 296 381 296 382 0.96

Sequence Information

Coding Sequence
ATGCAGCAAATGGACGATCCGCCTTCGCTGCCCGTGGGCACGGAGGTTAGTGCCAAGTATAAGGGCGCCTTCTGCGAGGCCAAGGTCAGCAAGGTGGTGCGCAACATCAAGGTAAAGGTGGCCTACAAGCAGGGTCTGGGCTCTGGCATCGTCTCCGACGACGCCATCAAGGCACCCACCGGCCAGTTGCGCGTGGGCGCAGTCGTGGAGGTCCGTCATCCGGATCGCAAGGAGATCGTGGAGGCAACCATTACCAAAATTCAGGACTGCTCCCAATATACGGTTGTGTTCGATGACGGCGACATCACAACGCTGAGGCGAACGGCTCTGTGCCTGAAGAGCGGGCGGCATTTCAACGAGAGCGAGACGTTGGATCAGCTGCCACTGACGCATCCGGAGCACTTTGGCAATCCCGTGGTGGGCGGACGCCGGGGACGGCGGCGTGGTCAACTCAACGAGGATAGTtccgacgacgatgacgagaGCGATGCCAAGGAGGTGGTCaacgagaaggaggagaatATCGGCAAGGTGGTGTGCGTGGAGACCGAGTCCAAGAAGAAGGACAAGGAGAAATGGTTTCCCGCCCTCGTAGTGGCACCCACAGCACAGGCCACCGTCCGCATCCGCGTGAAGGACGAGTACTTGGTGCGCTCGTTCAAGGACGGCCGCTACTATACGGTGCCGAAGAAGGAGGCCACCGAGTTCACCCGCGAGGTGGCCAGCAAACAGGATGTGCCTGCTGTGCAGGCGGCCCTCGAGTTCCTCGACAGCAGTATCCTGCCGCCCCACTGGGACCGCGACTCGCTGTTCGGGCTCTCGAACCTATCCAGCGACGACGAGGGCGAGATCGACTCGGACTCCTCCGACGACGAGCCGCACGAGGAGAAGGATCGCTTTGTGGCGCAGCTGTACAAGTACATGGACGACAGGGGCACGCCCCTCAACAAGGTGCCGTCCATTCAAAGCCGGGACGTCGATCTCTACCGGCTCTTTCGGGCGGTGCAGAAGCGCGGCGGCTACAACCGCGTGACCACCCAGAACCAGTGGAAGCTCATTGCCGTCCGCCTGGGCCTGACGCCGTGCACGGTGAGTGTGATGAACCTGGTGAAGCAGGCGTACAAAAAGTTCCTGCAGCCGTACGGCGACTTCCACCGCAAGCTCGGCTGCTCCATGCTGATGACGTCCAGGAACTCGAACCGCAGCAAGGGCAGGAGCCTGGTGCGCGCCAATTCGGTGGCCTCGCCCAAGCCCACAGAGACAACGAAGACGGAGACCATCAGCAAGTTGGCGCAGCCAAACCAAACAAACGTGGCTGCGGCCGTGGCGGCAGCTTCAACTGCAGCAACAGCCTCAAGCTCAGCTGCAGTGGCATCAGCCACTCCGGTCAGAGCTGCGTCCACCTCCGCCTCCCAATCAGCGGTCGAGGTGGAGTCGGAGGACACCAGCGAGTCCAGTGTTGTGGTCGACTTGCCGGCGAAGAAGCAGAGGAAGGGCTCGTCGGCGGCCAGCAGCAGTCAGCAGGGCAAGGTCAAGACCCTGGTGGAGAAGTACGAGGAGAAATCGActgcagcagcacagcagcaggcTTCGTCATCCGCTGGAGGAGGCGGAagcggaggagcagctgctacTGCGCCAGGCCCTGGAGCCAGCGGATCGACTGCAGCCACAGCAACCACACCAGCTACGTCGGGAgtagcctcctcctccaccaatCCAGCGGCTTCATCCAAGGATACCGAATCGGACATGCCACTGGCCAAGATCaaggcagctgcagcagcagcggcagcggccgCCACGAGAAACAACAGCATGGAGAAGGAGACGAACATCAGCTCCGGCAGCAGCGCCTCCGCCTCCAGCAAGGCCAATTCAGCGGAGATGCAGCGCAGTCGCGATGTCTCGCCATCAGGTGAGTGA
Protein Sequence
MQQMDDPPSLPVGTEVSAKYKGAFCEAKVSKVVRNIKVKVAYKQGLGSGIVSDDAIKAPTGQLRVGAVVEVRHPDRKEIVEATITKIQDCSQYTVVFDDGDITTLRRTALCLKSGRHFNESETLDQLPLTHPEHFGNPVVGGRRGRRRGQLNEDSSDDDDESDAKEVVNEKEENIGKVVCVETESKKKDKEKWFPALVVAPTAQATVRIRVKDEYLVRSFKDGRYYTVPKKEATEFTREVASKQDVPAVQAALEFLDSSILPPHWDRDSLFGLSNLSSDDEGEIDSDSSDDEPHEEKDRFVAQLYKYMDDRGTPLNKVPSIQSRDVDLYRLFRAVQKRGGYNRVTTQNQWKLIAVRLGLTPCTVSVMNLVKQAYKKFLQPYGDFHRKLGCSMLMTSRNSNRSKGRSLVRANSVASPKPTETTKTETISKLAQPNQTNVAAAVAAASTAATASSSAAVASATPVRAASTSASQSAVEVESEDTSESSVVVDLPAKKQRKGSSAASSSQQGKVKTLVEKYEEKSTAAAQQQASSSAGGGGSGGAAATAPGPGASGSTAATATTPATSGVASSSTNPAASSKDTESDMPLAKIKAAAAAAAAAATRNNSMEKETNISSGSSASASSKANSAEMQRSRDVSPSGE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00550043;
90% Identity
iTF_00617417;
80% Identity
-