Basic Information

Gene Symbol
hang
Assembly
GCA_008042815.1
Location
VNKE01002105.1:24863-35422[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 19 0.26 19 5.9 1.0 3 23 246 267 245 267 0.93
2 19 0.33 24 5.6 3.2 3 22 375 394 373 394 0.89
3 19 0.00057 0.04 14.3 3.3 1 22 515 536 515 538 0.90
4 19 0.065 4.6 7.8 0.1 2 21 550 569 549 570 0.93
5 19 0.00065 0.046 14.1 0.2 2 23 704 726 703 726 0.95
6 19 0.0019 0.13 12.6 0.1 1 23 734 757 734 757 0.96
7 19 1.5e-05 0.0011 19.2 0.1 2 23 844 865 843 865 0.97
8 19 0.00027 0.019 15.3 2.9 2 23 946 968 945 968 0.97
9 19 0.021 1.5 9.3 0.2 2 23 977 999 976 999 0.95
10 19 0.002 0.14 12.5 0.1 1 23 1012 1035 1012 1035 0.97
11 19 0.00012 0.0084 16.4 1.1 1 23 1098 1120 1098 1120 0.99
12 19 0.0018 0.13 12.7 0.9 1 23 1128 1151 1128 1151 0.96
13 19 0.72 51 4.5 0.3 2 19 1159 1176 1159 1177 0.93
14 19 3e-05 0.0021 18.3 1.4 3 23 1266 1286 1265 1286 0.98
15 19 0.0047 0.34 11.4 0.1 1 23 1321 1343 1321 1343 0.97
16 19 0.00056 0.04 14.3 0.6 2 23 1434 1456 1433 1456 0.93
17 19 0.52 37 5.0 0.1 2 20 1476 1494 1475 1496 0.91
18 19 0.0062 0.44 11.0 0.4 3 23 1511 1531 1511 1531 0.98
19 19 9.6e-05 0.0068 16.7 2.1 1 23 1845 1867 1845 1867 0.98

Sequence Information

Coding Sequence
ATGAATGGGgaagcggcaacagcagcagcggcagcagaagcATCCGCAGCACTTCCATTGCTCATCCAAGATGGCGGATGGATGCTGGAAAAGAAACGCTTGGCTCGGAATGGAACGGATTTCGCAACTTGGAGGATCACCTCACAGGATCGACTGTCGCTGCACATATGCCACGCCTGCATCAGCTACCTAAACTCGTGGCAGAGCTTCAAGAACCGCTGCCTCAGCTCACAGACAAAGCAGCGCCAGTGGCTGGACACCAGCGGCAAGAGCAAGCTCTTTAACTATCTGGACCTGAACAGTGCCGAAAACGGTGGAGCCACCTCCGATCACCAACAGCAGCATTCGCAACCGCATCAATCGCAATCGGAGAATGAGCTCGACGCGGAGAAGGCGACAGCAGCGGCCACAGCGGCCGCCAACATATTGGATGGCATACCCTCGTTGAAGAAACGCAAATCCCTAACAGTTTATCCGCTGCCGGCGTTGCCCATCAAAGATGAGCCCATTGACACGGACGATGACTACCAGATGAAGATGATAGACGAGTCCGACGACATGGTCGATCCCACAATGTTCCTAGAGCGTTCCGAGCACGAGGGCGATATGCCGTTGATGGCCTCGGACTATGACTACTCGGCTCAGCATGGCGTTAATGCCCATTCTCTGGCCGCCGGACTGCCACCGAATGCGGTTGCCAATGTGGCCGCCGCCGGCGATTCCAAAGTGGCCAGCTGCCGGGCCTGCAGCCTGCAGTTCTCCACCCGAGCCAATGCCCGTCGGCATGAACGCAATCTACATCCGAACCTCTTCCAGCTGTCCACGGACTCGCTCCACAACACATCGGTGACGAAGCCAACGCCAGCTCTGGCCGCCGCCTTGGAAATCCAGCGGGCGGCGGCCGCGGCGGCCACCGCAGAGGCGAACCGTGCTGTGGGCGCTGCCGGCGGAAATATCACTCCACAGAAATACCGTCAGGTGGTGATGAATGCGTTCATCAAGTGCGAGGGCGGCGGCTACGACTACGACAATCCGGAGCAGTATCGTCCGCTGCTCACCCACGACAAGGTGGAGTTCATCGAACAGAATGAGGAGTTCCTCGAGCAGTACCAGACGATgacctgccgctgctgcaacaAGTACTTCAGCACGTACAAGAACTTCATGGCGCACGTGCGCAAGAAGTATCCGCTGTTGCCGCGCAACCTATGCTTCAACTGCCTCAAGATGAACGACTCCAAGGCGCTGTTCATCTCGCATCTCAAGAAACGCAACTGCATAAATCTCTATAGGGTGCTGAATACACTGCGCGGCAAGACACCAGTGCTTTCCATCACCGccacggatgcggatgcggaagCAGCGACAGCGTCGGCTGAAGATGGAGCCACAGCAGTAGCTGTAGCGGTGGCAGATGCCGGTGCCGGCGTTGTTACAATGGCCAGTCCCACGGTGACCATCAGTGGAGAGACCGCCGGCACTACTAGCGGCGGTGAGCGGCCAGAGAAGCTACGCGCCAAGGAACTGCTGGTGAACAAGCTATACGAATGCAAGCTCTGCCCCAAGGGCTTCCGCACCAAGCACGAGTTCCGCACCCATGTCTACGACAAGCATGCGGATGTGCAGCGCAAGGACAACAACTCGATACAGTGCAGCTTCTGCGGCTTGGACTTTGCTGATCCGGTGGACAGGCGTCGCCACTACAACAACATGGACTGCATTGTGCGTCTGCGCTGCATGACATGCGATGCCAAGCTGGAGACGCACCAGCGCTTCCTCGATCACGTCTACCAGGATCATCTGGGCGGCgtgggcggtggcggcggtggtgccAGCAGTGATAATGCCTCAACGACTGGCAGCGGCCTGGCCAGGAGCAACAGTATGGAACACTCGCCGGGCAAGAGGAGCCTGCTCGGTGCCCTGGGCATAGGCGTTGGCTCGTCGGCTGAAGAGTCGCGCAGCAGCAGTGTGGCACCCACATTGACGTCCACACCCAAGCCAGCGGGAGGCACGGCCACAACGGCCTCCTCTGCCTCCGCGCCCAGTTCGGCCAATCGCGGCGATGCGGCCGCACCCAAATCCCAGTACTTTTCGCGAATGCCGCAGGTGTGTCCCATTTGCGGACAGCAgtacaacaactacaacaacgtGCTGCGCCACATGGAATCGAAGCATCCCAACAAGCTCCCCGAGACATACAAATGCGTGCGCTGCGGCCTCGGCTATCCGCGTATCTCCTATCTGCGGGAGCACATGATCAATGTGCATGGCGTGGACAAGAACCGTCACTCGGGCGGCTTCGAGTACATCGTGAACGCTGATGCCGTGAAGCTGGCGGATGGCAGCACGCCGAATGTGTATACGGGTCGCTACGATTACGTGATGAAGGACCTGATGTCGATAACAAATGGTGGGACCCTCGACGAAGACGATGAGGAGGCAGCGGGCAGCGTGGCCAAGAAAATCCGACTGgacgacagcagcaacaacagcagcttgGCGGGCGtcgccagccagcagcagaaggagtgCCCCATCTGCAATGCAGTGTTCAGCAACAACATTGGCCTCTCCAATCACATGCGCTCCCATTACACAGCTGCCAGTGTGGTGACCGCAGCTCTGGCGGCCGCCAATCGCATGACACCCAAATCACTGACCATAACAGCAACGCCATCGGCAGCGGATGCCAGTCCTGAGGCGGCGACATATACAGCATCGGGCGCTGGCAGCAATGTCGTGCCACCGGCAATGGCCAATCAAACGCCCCAGGAGCAGGCCGTATTCCGACGGAGCTTGGATCAGGCGGCCGACCGTCGCTTTCGGCGAATGCGCTGCCGGATTTGCCAGCGGCGCTTTAGCTCAAAGAAGTCCTATCGCTACCACATGCTGACGGACCATCAGGTGCAGAATGTGCAGTTCATCAAGTGCAAGCTGTGCAACGCAGAGTTCGCCTACGAGAAGGGTCTGAAGGTGCATCTGTTCAAGGTGCACGGCCGGGCCATCAAGGACGAGATGATTATCAAGCAGTTCGAGTGCGAAGTCTGCTCGATTGTGTACAGttcggagctggagctgcaacAGCACAAGCGCAGCGTCCACAAGCTGACCTCGGCATCGGCCTCTGCATCTGCCTCGGCATCGGCGTCCGCCTCCACGTCATCGAAGATGGAGGACGACGGTTTGATGGACGAAGACGGCAAGCCAACAGCCGCAGGCGATCATGCCGATCTGTCCACCCTTTCCGCCAATGTTTCGGGACTGGGAGTGGGCACGCCGTTGTACTGGTACCAGTGCAAGTACTGCCCCTCGAACTTCAACACCAACAAGAAGCTGGCCATTCACATTAACTCGCACGACGAGTTCGACTCGAATGATTACTCCTGCAAGGATTGTGGCAACGTCTATAGCGGACGCAAGAGTCTATGGGTGCACCGCTACAAGAAGCATCCACAGGTGCCAGATCCGGCCGAATGCTCGCTGTGCCGCAAGATCTTCTTCGATCGCCAGATGCTGGACAACCATACGCCCACCTGCAACCGCAAGCCAATCACATCGACGGGtgcccaccagcagcaggatgcgctgcatcagcagcaggcggcatTGCAACGTGCTGTTTTTAGACACAAGACGggtgacgatgacgacgaggatgaggatggccagcagcagcagctggaagaGGGCGATAGCAATGGAGGAGCAACAGCGTCGGCATCGGGAAGCGCtgctgtggcagtggcagcttCTGCCCAGGCTGCACTGAAGATTCGCATACCGGAGGTGGCCTGCACCATTTGCGGGGCCCGGTTCACCGATCAGGAGCACTTTAGCAAGCACATCCAGAAGCACGAGCAGGAGCTGTATGTGGACAATCCGCTGGCGGCGATGTTTGACGATGGGCCGGCGGATGCCGGTCAGTTCCAGGTGGAGCGGCAGAACGAGAACGGGGAATACGCGTGCGATTTGTGCGCCAAGACGTTCCCCCAGGTGATTGCGCTCAAGGTGCATCGCAAGTGGCATTTCAGAGGTGATAGCAAGCAGAACCCCATCGACGGCGAAGCGACACAGTTGACCAACAACAATCACActaccagcaacaacaacaacaacaccaacagcagcagctcgatGTCACACCTCCGCGAGCTGCATGCGGTGGGCCTGATGcccaaccagcagcagcagcagcagcagagccacAACAGCCActcgagcagcagcaacaacaacaacatgaaccacagcggcggcagcagcagcagcaagtcgATGAAGCGGAAGCGTGAGCTCAAGTGCGAGTACTGCGCCTCGACCttcatcagcaacaacaatctGCGCCGGCACATGTACGAGCTGCACAAGCACGAGGTAAGCAATCTGCCGGAGCCACCGGTCATCTTGGTGGACGATCATCTGCAGTGCCGTCGCTGTCAGCTCAGTTTCGAAACAAAGGAGCTGTGGATCGAGCACAAGCTGGCGGATGCGAAGGTGGTGCGTCCGTTCTGCCCCTTCCAGTGGGGCTGCGACCTGTGCGGCGAGTATCTGTCACGGAAGGAGAAGCTGATGAATCACATTAACAATCATCTCAAGGAGGAGGTCATTGTGCCGGTGGCTACAAAGGCGGCCATCGATCGGGAAgcggcggcaacggcagcgacagcagcagctgcgaatgcgacggaatTAACAGAGGACGATGAAGTGGATCAAGATCGGGAGAACGAAGCTCGGGACAACAAAGATAAGGCGGTGGTAGGAGGAGCACAAAAAGAAGAGGAAAGCGATGACCTGGACGAGGATGATAGCTccggcgaggaggaggaaagtTCCGGCACGGGagatgatgaggatgatgactccgatgaggatgaggatgatgacgaGGGAGATGGAGGCGAAGGTGAAGACGAAGAGGGTGTGCAGCCTGGTCATCTGTTggcccaacaacagcagcagctccagcagcagcagcagcagccgcaggacAACCAGGACGACGATGATATTGTCGAGGAGGTTATTAGCTGGGAGGACGAAGATGATGGTGAGGTGGAGagcgacgatgacgatgacgacgatgtcGAGGAGGATGATGACGAGGATGTCGACGAAGATGATGACGATGTGGAGGAGCCGGAaccagtggcagtggcagtggcactggCGCCCTCGCAACCTCTGatgaatggcaatggcaagGCCAAGTCGAAAATGCCGCCACTGATTATGGCCAGctccgacgaggaggaggatgatggCGTTATGCCCATCGATGATATTATCGAAGAGGAATTCGACGAAGACGACGCCATGCCAGACGCAGATGTCGATCCGGATGATCCCATCGAGGAGGTGGACGACGATGATTTCGTggaaatggaggaggaggtggtatCGGCAGCCTCCTCATCGGAGAGCGAGTCCACATCAACGACCACATCCAATTCGcactcgcattcgcattcgcattccaCGGGTGAGCGGCGTAAGAAGAGGGCTGACGATCAGTTGAATGATCCCAGCTTTACCTGTGATCTATGTCAACTTTGTTTTGATTCCCAGGAGCTACTCCAGAGCCACATCAAAAGCCATTTCCTCAATGGGCCAAAGCTCAcagtggcggcagcagcagcatcaatgcCAGTCgccgccacagcagcagcagcagcaacaacagcagcagcagcggcatcgTCAAGATCGTCACtagcaacggcaacggcgacggcgaAGCCTGACTCCAAGTCAGCGCtgctggccaacaacaataataataagagcAGCAAgactgttgcagctgcagctgcagccacAAACTGA
Protein Sequence
MNGEAATAAAAAEASAALPLLIQDGGWMLEKKRLARNGTDFATWRITSQDRLSLHICHACISYLNSWQSFKNRCLSSQTKQRQWLDTSGKSKLFNYLDLNSAENGGATSDHQQQHSQPHQSQSENELDAEKATAAATAAANILDGIPSLKKRKSLTVYPLPALPIKDEPIDTDDDYQMKMIDESDDMVDPTMFLERSEHEGDMPLMASDYDYSAQHGVNAHSLAAGLPPNAVANVAAAGDSKVASCRACSLQFSTRANARRHERNLHPNLFQLSTDSLHNTSVTKPTPALAAALEIQRAAAAAATAEANRAVGAAGGNITPQKYRQVVMNAFIKCEGGGYDYDNPEQYRPLLTHDKVEFIEQNEEFLEQYQTMTCRCCNKYFSTYKNFMAHVRKKYPLLPRNLCFNCLKMNDSKALFISHLKKRNCINLYRVLNTLRGKTPVLSITATDADAEAATASAEDGATAVAVAVADAGAGVVTMASPTVTISGETAGTTSGGERPEKLRAKELLVNKLYECKLCPKGFRTKHEFRTHVYDKHADVQRKDNNSIQCSFCGLDFADPVDRRRHYNNMDCIVRLRCMTCDAKLETHQRFLDHVYQDHLGGVGGGGGGASSDNASTTGSGLARSNSMEHSPGKRSLLGALGIGVGSSAEESRSSSVAPTLTSTPKPAGGTATTASSASAPSSANRGDAAAPKSQYFSRMPQVCPICGQQYNNYNNVLRHMESKHPNKLPETYKCVRCGLGYPRISYLREHMINVHGVDKNRHSGGFEYIVNADAVKLADGSTPNVYTGRYDYVMKDLMSITNGGTLDEDDEEAAGSVAKKIRLDDSSNNSSLAGVASQQQKECPICNAVFSNNIGLSNHMRSHYTAASVVTAALAAANRMTPKSLTITATPSAADASPEAATYTASGAGSNVVPPAMANQTPQEQAVFRRSLDQAADRRFRRMRCRICQRRFSSKKSYRYHMLTDHQVQNVQFIKCKLCNAEFAYEKGLKVHLFKVHGRAIKDEMIIKQFECEVCSIVYSSELELQQHKRSVHKLTSASASASASASASASTSSKMEDDGLMDEDGKPTAAGDHADLSTLSANVSGLGVGTPLYWYQCKYCPSNFNTNKKLAIHINSHDEFDSNDYSCKDCGNVYSGRKSLWVHRYKKHPQVPDPAECSLCRKIFFDRQMLDNHTPTCNRKPITSTGAHQQQDALHQQQAALQRAVFRHKTGDDDDEDEDGQQQQLEEGDSNGGATASASGSAAVAVAASAQAALKIRIPEVACTICGARFTDQEHFSKHIQKHEQELYVDNPLAAMFDDGPADAGQFQVERQNENGEYACDLCAKTFPQVIALKVHRKWHFRGDSKQNPIDGEATQLTNNNHTTSNNNNNTNSSSSMSHLRELHAVGLMPNQQQQQQQSHNSHSSSSNNNNMNHSGGSSSSKSMKRKRELKCEYCASTFISNNNLRRHMYELHKHEVSNLPEPPVILVDDHLQCRRCQLSFETKELWIEHKLADAKVVRPFCPFQWGCDLCGEYLSRKEKLMNHINNHLKEEVIVPVATKAAIDREAAATAATAAAANATELTEDDEVDQDRENEARDNKDKAVVGGAQKEEESDDLDEDDSSGEEEESSGTGDDEDDDSDEDEDDDEGDGGEGEDEEGVQPGHLLAQQQQQLQQQQQQPQDNQDDDDIVEEVISWEDEDDGEVESDDDDDDDVEEDDDEDVDEDDDDVEEPEPVAVAVALAPSQPLMNGNGKAKSKMPPLIMASSDEEEDDGVMPIDDIIEEEFDEDDAMPDADVDPDDPIEEVDDDDFVEMEEEVVSAASSSESESTSTTTSNSHSHSHSHSTGERRKKRADDQLNDPSFTCDLCQLCFDSQELLQSHIKSHFLNGPKLTVAAAAASMPVAATAAAAATTAAAAASSRSSLATATATAKPDSKSALLANNNNNKSSKTVAAAAAATN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00527463;
90% Identity
-
80% Identity
-