Basic Information

Gene Symbol
ncor1
Assembly
GCA_008042815.1
Location
VNKE01003421.1:64711-69700[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1e-07 0.0001 22.2 0.0 3 43 433 473 432 475 0.97

Sequence Information

Coding Sequence
ATGGAAGCCGCACCCCATTATGCCAGCCAACCAAATAGTAATCCCTCCCAGCAacagaagcaacaacagcagcagcagcagcagcaacagggaGCGGCGGGCGGACCACCCTCGTCTGCCGGGGACAATTGCAGCCGCATAATGGTCGGTAATCGGGGCATCCTGATACCCCACTCGCAGGCCCTGCAGTATACCAGCGACAGCTTGGCAGGAGTGGGAACGGTGACTGTGTCCACGACAGGACCCGGAGCGGGAtcgagcaacagcagcagccatgtgaTTGCGGGAGGAAGTGCCAGCACAGAGGCCTACCATCCACAGGTGGAGGCCATCTCGCCAACGCTGCCCAGCGATAATGCCATCGAGGAGCGCGGTCGGACCAGCGCCAAGGAGGAGCTGCTTATGAAAATCCAAAAAGTTGATAATGACATCAAATCCGCCGAGACAACCATGGAGACGTTGCGTAAAAAGGAGAAGAGCCTTATGGAGGAGGCGGCCCTGGCCAAGCAGCAGAAGGCCGCCAAGGATGTGGTtgctaacaacaacaataataataataacaacaacaacaacaacaataacaacaataacgaaCAGGATGAAGTTGTGGAGCTGGCCTGGCGCGGCCAAATGCTAGCGGAGAAGATCTATGCGGCCAACAGAAAGACGGCCCATGACCAACATTCCAAGCTGCTGCAGATTGCAgtaacgacgacgacgacgacgacgacgacggcggcggcggcgacgacgTTGCAGCCCAGCGATGCCTTGAGCATACGACCTTGGCTGCCGCTATATAACCAACCCCTGGACGTGGAGGCCCTAGCGGTGCTTATACGCCAGCATCAGAGCCAGGTCCGTGCgcccctgctgctgcacatCCAAAAGCTAAAGGCCGAACGCTGGCTGCACAACCAGGGACTCGTGGAGAAGTACACCAAGGAGCAGGCCGACTGGCAGCGACGCTGCGAGCGCATGGAGGCCAGTGCCAAGCGGAAGGCGCGCGAGGCCAAGAATCGCGAGTTCTTCGAGAAGGTATTCACGGAGCTGCGCAAGCAGCGCGAGGATAAGGAACGTTTCAATCGCGTCGGCTCGCGCATCAAGTCCGAGGCGGATCTCGAGGAGATCATGGACGGACTGCAGGAGCAGGCGCTCGAGGATAAGAAGATGCGCTCGTATGCCGTCATACCGCCCCTGATGTACGATGGCCGGCAGCGGCGGTGCGCCTATCACAACGAGAACGGACGCATCGAGGACATGATGGCGGAGCATCAGCAGCGCAAGGCCCTCAACATGTGGACGGCGGGCGAGAAGGAGACCTTCAAGGAGAAGTATCTGCAGCATCCGAAGAACTTCGGAGCCATTGCCGCCAGCCTGGATCGCAAGTCGCCGCAGGACTGCGTCCGCTACTACTACCTCAGCAAGAAGACGGAGAACTACAAGCAGCTGCTGCGCAAGTCCCGCCAGCGCACGCGCAGCTCCCGCAATCCGGCCAAGGCCCAGGCCGCTCAGCCGCAGTGCATCATCGATTCAATGACCACCGGCGTTATGACGCGTCTCCAGCGTGAGCAGCAACAGAAGTCCGGCTATCGATCGTCCGCCGTTGCCGAACGTGAGCGGGCCGAAAGGGCCGCCGAACGGGAGCGTGTGGCGGAGAAGGCTGCCGCGGATGCAGCCAAGGCGGCTGAGAGTGCCGCCGAGAAGGCAAGTGCGGCCACCAAGGCGGTGGAGGCCTCGGCGGCTGGCGAGAAGGTGGCCAagcaggcggcagcagcggcacaagcggcggcggcacaagcagccgcagcggcagcagcagcgtcatCGTCGTCAACGGTGGCGACGTccacgacaacgacgacgacggcgacgacgactgcCACAACGGCAGCAGAGaaggcagcggcggtggcggaggcaGCTGCGGCAGCAACGCCCAAGAATGCCTCCAGCGATAAGAACGCCTCCACGGCAGCCGGAGCGGGTACGGTGGGCACAGCAGCCGTTGCTCCAACGGGCGGCACCACACCTGCATCCACAAacgcagcaacagcggcaccCACACCATCAGAGATCTCAGCGGGCGGCGGCAGCGTAGAGGCCACTGCCAAGAGTAGCAAGGCCGCCGATGACgaggcagccgcagcagcagcagcaggaggaatAACAtccggcggaggagcagccacAGTGGCGGCCACGGCTGGCCATACGCCAGCCAGTGCGACGGCAGCCAGTGCCACAAATCCGGCATCCGAGGTCAGCACGGGCACGGCAACGGGTGCCACGGCCGCCGGTGGCGGTGTCAAGGGAGCCAGCAAGCCGGAGACGGCCACCGAGCCAGCGTCGGGAACAGCGGCCAAAGGTGCTGATGCGGGCACAGAACCCAGCACAGATCCTCTGGCCAAAACTCTAGGTGTGGCCAGCAAAGAGAACGCTACTGGCGGGACCACATCAGCTGCTCCAACACCGGCACAGGGCGTAACCTTGAATGGGTTCAAGACCGGTTACCAGACCGTGGTCATGGCCAATGTGAAGGCATCGGCGGCAGGCGCCGGCGATGATTCCGCCGCCAGtggcggagcaggagcagcaggtaCGGGAGCAACGAAGAATGCGACAATGGCAactggtggtggcggcggcaacagcaacgaTAAAATCGTCAAGACAACGCCAACGCCGGGCGCTGTTCCGAATTCAACAGGTACTCCCGCCGAGAGTGGTGGAGCCGGAGcgggagccggaggaggagtacCCACATTGACCACCGCCACGACGGCGGGCAATTATCTTGGCCAGAAATTGAAGGCGGCCCAAGTGGAGGGACTCGGGGCGGGCAATGATCTGCATGGGGATGTTAGTGACTCCAAGCGAAAGCGCTTCGAAATGAATGCCGGCGGCGAGGCACAGCAAGTGGGCGGAGCAAGTGCCACCAATAGCCACAACAGCAATCTGAACAATCTGAAGGCCAATGCCAAGGATGTGTCAATGGGCaagtcgtcatcatcatcgctaGCATCCTCTGCTGCGGTAtcatcctcctcatcgtccGGTTCAGTGGCATCCTCTGTGGTTACCTCCGCGCCGGCCTCTTCGTCCGGTTCCATTCTACTGATCAGTGCCGCCTCCATAATGTCCACAGCCTCTGGTTCGGGATCTACAGGATCAACGGCGTCCTCAGCTCCGGCGATCTCGATGCCCCTGCTATCGGATGGAAGCGAGATTATTGCATTGGATGGCAAGGATGATGTCCTTGCTGCCATAGACTTGCGCTTTCAGCTATCCTAG
Protein Sequence
MEAAPHYASQPNSNPSQQQKQQQQQQQQQQGAAGGPPSSAGDNCSRIMVGNRGILIPHSQALQYTSDSLAGVGTVTVSTTGPGAGSSNSSSHVIAGGSASTEAYHPQVEAISPTLPSDNAIEERGRTSAKEELLMKIQKVDNDIKSAETTMETLRKKEKSLMEEAALAKQQKAAKDVVANNNNNNNNNNNNNNNNNNEQDEVVELAWRGQMLAEKIYAANRKTAHDQHSKLLQIAVTTTTTTTTTAAAATTLQPSDALSIRPWLPLYNQPLDVEALAVLIRQHQSQVRAPLLLHIQKLKAERWLHNQGLVEKYTKEQADWQRRCERMEASAKRKAREAKNREFFEKVFTELRKQREDKERFNRVGSRIKSEADLEEIMDGLQEQALEDKKMRSYAVIPPLMYDGRQRRCAYHNENGRIEDMMAEHQQRKALNMWTAGEKETFKEKYLQHPKNFGAIAASLDRKSPQDCVRYYYLSKKTENYKQLLRKSRQRTRSSRNPAKAQAAQPQCIIDSMTTGVMTRLQREQQQKSGYRSSAVAERERAERAAERERVAEKAAADAAKAAESAAEKASAATKAVEASAAGEKVAKQAAAAAQAAAAQAAAAAAAASSSSTVATSTTTTTTATTTATTAAEKAAAVAEAAAAATPKNASSDKNASTAAGAGTVGTAAVAPTGGTTPASTNAATAAPTPSEISAGGGSVEATAKSSKAADDEAAAAAAAGGITSGGGAATVAATAGHTPASATAASATNPASEVSTGTATGATAAGGGVKGASKPETATEPASGTAAKGADAGTEPSTDPLAKTLGVASKENATGGTTSAAPTPAQGVTLNGFKTGYQTVVMANVKASAAGAGDDSAASGGAGAAGTGATKNATMATGGGGGNSNDKIVKTTPTPGAVPNSTGTPAESGGAGAGAGGGVPTLTTATTAGNYLGQKLKAAQVEGLGAGNDLHGDVSDSKRKRFEMNAGGEAQQVGGASATNSHNSNLNNLKANAKDVSMGKSSSSSLASSAAVSSSSSSGSVASSVVTSAPASSSGSILLISAASIMSTASGSGSTGSTASSAPAISMPLLSDGSEIIALDGKDDVLAAIDLRFQLS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00617584;
90% Identity
-
80% Identity
-